Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 1.3e-81 306.2 140 100.0
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 1.3e-81 306.2 140 100.0
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 8.9e-75 283.5 138 96.4
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 2.1e-68 262.3 145 89.0
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 9.6e-37 157.1 72 100.0
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 3.8e-33 145.2 72 95.8
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 3.8e-33 145.2 72 95.8
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 2.7e-31 139.0 72 91.7
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 3.6e-28 128.6 77 77.9
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 4.0e-27 125.2 77 77.9
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 6.9e-27 124.4 77 79.2
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 1.3e-25 120.2 77 72.7
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 6.4e-25 117.9 77 74.0
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.2e-23 113.6 78 69.2
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 2.1e-23 112.8 77 66.2
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 2.1e-23 112.8 77 64.9
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 6.0e-23 111.3 78 66.7
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 1.0e-22 110.5 78 66.7
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.3e-22 110.2 78 67.9
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.3e-22 110.2 78 67.9
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 1.3e-22 110.2 77 63.6
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 1.8e-22 109.8 78 67.9
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 2.3e-22 109.4 78 66.7
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 2.3e-22 109.4 79 68.4
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 2.3e-22 109.4 79 67.1
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 3.0e-22 109.0 78 65.4
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 3.0e-22 109.0 78 65.4
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 3.9e-22 108.6 78 64.1
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 3.9e-22 108.6 78 69.2
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 3.9e-22 108.6 78 66.7
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 5.1e-22 108.2 77 64.9
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 5.1e-22 108.2 99 52.5
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 6.7e-22 107.8 78 70.5
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 6.7e-22 107.8 78 65.4
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 6.7e-22 107.8 78 65.4
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 6.7e-22 107.8 74 67.6
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 8.7e-22 107.5 78 64.1
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 8.7e-22 107.5 78 65.4
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 8.7e-22 107.5 78 65.4
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 8.7e-22 107.5 78 65.4
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 8.7e-22 107.5 78 64.1
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 1.1e-21 107.1 79 65.8
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 1.1e-21 107.1 78 65.4
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 1.1e-21 107.1 78 64.1
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 1.1e-21 107.1 78 64.1
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 1.1e-21 107.1 78 64.1
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 1.5e-21 106.7 78 64.1
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 1.5e-21 106.7 78 62.8
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 1.5e-21 106.7 78 64.1
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.9e-21 106.3 77 63.6
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 1.9e-21 106.3 78 64.1
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 1.9e-21 106.3 78 64.1
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.5e-21 105.9 78 62.8
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 3.3e-21 105.5 78 65.4
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 3.3e-21 105.5 78 66.7
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 3.3e-21 105.5 77 61.0
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 3.3e-21 105.5 78 61.5
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.3e-21 105.1 78 67.9
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.3e-21 105.1 78 67.9
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 4.3e-21 105.1 78 62.8
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 4.3e-21 105.1 77 62.3
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 4.3e-21 105.1 77 62.3
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 4.3e-21 105.1 77 62.3
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 4.3e-21 105.1 77 62.3
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 4.3e-21 105.1 77 62.3
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 4.3e-21 105.1 77 63.6
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 4.3e-21 105.1 77 62.3
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 4.3e-21 105.1 78 62.8
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 5.6e-21 104.8 71 76.1
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 7.4e-21 104.4 78 64.1
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 1.3e-20 103.6 77 59.7
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 2.1e-20 102.8 78 60.3
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 2.1e-20 102.8 78 60.3
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 2.8e-20 102.4 78 62.8
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 2.8e-20 102.4 78 62.8
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 2.8e-20 102.4 77 62.3
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 2.8e-20 102.4 77 62.3
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 2.8e-20 102.4 78 64.1
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 3.7e-20 102.1 85 58.8
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 3.7e-20 102.1 78 60.3
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 3.7e-20 102.1 78 60.3
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 3.7e-20 102.1 77 61.0
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 6.2e-20 101.3 78 62.8
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 1.4e-19 100.1 78 60.3
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 1.4e-19 100.1 77 58.4
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 2.4e-19 99.4 77 57.1
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 3.1e-19 99.0 78 59.0
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 4.0e-19 98.6 78 59.0
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 4.0e-19 98.6 78 60.3
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 5.3e-19 98.2 77 57.1
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 5.3e-19 98.2 78 60.3
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 6.9e-19 97.8 79 67.1
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 2.6e-18 95.9 77 57.1
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 2.6e-18 95.9 79 58.2
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 3.4e-18 95.5 78 60.3
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 3.4e-18 95.5 79 58.2
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 5.8e-18 94.7 78 56.4
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 7.6e-18 94.4 78 60.3
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 4.9e-17 91.7 78 57.7
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 6.5e-17 91.3 78 60.3
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 4.2e-16 88.6 68 69.1
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 5.5e-16 88.2 124 41.1
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 1.6e-15 86.7 78 53.8
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 2.1e-15 86.3 78 53.8
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 6.0e-15 84.7 78 55.1
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 5.1e-14 81.6 75 49.3
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 6.7e-14 81.3 75 50.7
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 6.7e-14 81.3 75 50.7
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 8.7e-14 80.9 78 52.6
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 1.5e-13 80.1 78 55.1
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 3.3e-13 79.0 71 52.1
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 4.3e-13 78.6 78 50.0
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 5.7e-13 78.2 68 58.8
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 9.6e-13 77.4 55 67.3
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.6e-12 76.6 55 69.1
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 2.1e-12 76.3 78 51.3
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.8e-12 75.1 55 67.3
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.3e-12 74.7 55 67.3
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 7.6e-10 67.8 47 63.8
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 7.6e-10 67.8 47 63.8
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 1.0e-09 67.4 47 63.8
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 5.0e-09 65.1 42 69.0


User provided reference genes

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