Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 2.1e-68 262.3 136 100.0
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 2.1e-68 262.3 136 100.0
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 1.7e-59 232.6 130 94.6
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 1.7e-59 232.6 130 94.6
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 3.0e-59 231.9 137 92.0
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 6.6e-59 230.7 136 91.9
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.5e-58 229.6 136 91.2
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 1.2e-57 226.5 141 87.2
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 3.6e-57 224.9 136 89.7
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 1.8e-56 222.6 141 86.5
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 2.6e-55 218.8 140 88.6
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 1.2e-47 193.4 134 82.1
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 3.4e-47 191.8 140 79.3
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 1.4e-45 186.4 136 73.5
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 2.4e-45 185.7 140 77.1
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 7.1e-45 184.1 139 74.8
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 2.3e-43 179.1 136 74.3
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 3.7e-41 171.8 115 78.3
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 1.1e-37 160.2 144 61.8
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 4.2e-37 158.3 144 61.8
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 1.2e-36 156.8 144 61.1
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 2.1e-36 156.0 126 69.0
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 4.6e-36 154.8 102 75.5
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 7.9e-36 154.1 139 61.2
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 6.7e-35 151.0 143 59.4
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.9e-34 149.4 143 59.4
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 2.5e-34 149.1 128 66.4
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 4.3e-34 148.3 135 60.7
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 5.6e-34 147.9 130 60.0
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 7.4e-34 147.5 112 68.8
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 9.6e-34 147.1 103 73.8
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 1.6e-33 146.4 89 78.7
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 2.8e-33 145.6 110 65.5
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 2.8e-33 145.6 105 70.5
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 3.7e-33 145.2 108 68.5
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 3.7e-33 145.2 104 73.1
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 4.8e-33 144.8 114 63.2
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 4.8e-33 144.8 127 63.0
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.1e-32 143.7 93 76.3
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 1.1e-32 143.7 108 66.7
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.1e-32 143.7 135 57.8
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 1.1e-32 143.7 112 66.1
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 1.8e-32 142.9 117 65.0
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 3.1e-32 142.1 117 66.7
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 5.3e-32 141.4 87 77.0
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 1.2e-31 140.2 134 59.0
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 1.5e-31 139.8 105 68.6
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 2.0e-31 139.4 93 75.3
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 2.6e-31 139.0 167 50.3
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 3.4e-31 138.7 118 62.7
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 4.5e-31 138.3 141 56.0
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 5.8e-31 137.9 87 74.7
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 5.8e-31 137.9 136 61.8
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 5.8e-31 137.9 114 66.7
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 5.8e-31 137.9 134 59.0
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 7.6e-31 137.5 137 58.4
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 1.3e-30 136.7 102 66.7
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 1.3e-30 136.7 102 66.7
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 1.7e-30 136.3 145 57.2
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 1.7e-30 136.3 94 72.3
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 2.2e-30 136.0 89 71.9
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.9e-30 135.6 89 77.5
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 2.9e-30 135.6 133 60.9
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 3.8e-30 135.2 136 59.6
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 3.8e-30 135.2 112 65.2
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 4.9e-30 134.8 86 77.9
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 6.5e-30 134.4 119 63.0
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 1.1e-29 133.7 104 62.5
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 1.1e-29 133.7 105 65.7
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 1.9e-29 132.9 132 58.3
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 1.9e-29 132.9 102 64.7
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 3.2e-29 132.1 119 62.2
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 4.2e-29 131.7 120 62.5
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 4.2e-29 131.7 113 62.8
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 4.2e-29 131.7 112 63.4
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 7.1e-29 131.0 89 75.3
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 9.3e-29 130.6 117 61.5
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.5e-28 128.6 113 63.7
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 3.5e-28 128.6 117 59.8
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 4.6e-28 128.3 87 70.1
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 4.6e-28 128.3 107 61.7
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 6.0e-28 127.9 112 61.6
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 6.0e-28 127.9 90 73.3
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 1.0e-27 127.1 138 54.3
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 2.3e-27 125.9 151 53.6
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 7.4e-26 120.9 86 72.1
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 2.2e-25 119.4 84 72.6
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 8.2e-25 117.5 83 72.3
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 1.1e-24 117.1 73 75.3
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 1.8e-24 116.3 73 76.7
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 1.5e-23 113.2 70 74.3
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 5.0e-22 108.2 65 75.4
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 2.7e-20 102.4 107 47.7
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 4.6e-20 101.7 104 57.7
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.1e-16 90.5 86 59.3
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 2.4e-16 89.4 84 54.8
BcaC01g03170 Brassica carinata HOM05D007368 ORTHO05D009330 7.2e-13 77.8 52 84.6
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 4.7e-12 75.1 108 40.7
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 6.1e-12 74.7 90 48.9
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 2.3e-11 72.8 114 37.7
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 2.6e-10 69.3 81 40.7
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 8.2e-09 64.3 52 57.7


User provided reference genes

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