Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 2.9e-88 328.6 168 100.0
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 2.9e-88 328.6 168 100.0
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 1.2e-86 323.2 168 98.8
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 1.2e-86 323.2 168 98.8
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 1.2e-86 323.2 168 98.8
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 3.6e-83 311.6 168 95.2
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 2.4e-74 282.3 172 86.6
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 1.1e-68 263.5 172 83.1
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 1.1e-66 256.9 168 81.5
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 6.9e-66 254.2 168 79.8
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 2.2e-64 249.2 170 81.8
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 1.2e-62 243.4 170 79.4
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 1.0e-56 223.8 176 70.5
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 2.0e-49 199.5 180 61.7
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 2.0e-36 156.4 170 52.4
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 1.3e-35 153.7 173 53.8
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 1.1e-34 150.6 141 61.0
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 1.4e-34 150.2 172 52.9
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 7.0e-34 147.9 128 61.7
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 9.1e-34 147.5 103 70.9
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 2.0e-33 146.4 109 69.7
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 2.0e-33 146.4 188 50.0
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 2.7e-33 146.0 105 67.6
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 8.5e-32 141.0 186 49.5
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.1e-31 140.6 104 70.2
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.1e-31 140.6 104 70.2
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 1.5e-31 140.2 126 59.5
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 1.5e-31 140.2 106 66.0
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 5.5e-31 138.3 180 48.3
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 5.5e-31 138.3 100 69.0
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 7.2e-31 137.9 127 56.7
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 9.4e-31 137.5 129 57.4
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 9.4e-31 137.5 179 46.9
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 2.1e-30 136.3 172 51.2
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 2.1e-30 136.3 134 55.2
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 3.6e-30 135.6 182 46.2
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 3.6e-30 135.6 121 57.0
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 4.7e-30 135.2 109 64.2
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 4.7e-30 135.2 109 64.2
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 1.4e-29 133.7 121 58.7
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 1.8e-29 133.3 180 49.4
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 3.0e-29 132.5 172 47.7
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 3.0e-29 132.5 99 68.7
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 5.2e-29 131.7 109 64.2
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 6.8e-29 131.3 105 62.9
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 1.5e-28 130.2 126 57.1
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 2.6e-28 129.4 106 61.3
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 3.4e-28 129.0 146 49.3
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 9.8e-28 127.5 146 48.6
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 1.3e-27 127.1 130 56.2
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 1.3e-27 127.1 141 52.5
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 2.2e-27 126.3 148 47.3
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 2.2e-27 126.3 102 63.7
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 2.8e-27 125.9 138 52.9
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 2.8e-27 125.9 141 52.5
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 2.8e-27 125.9 123 56.1
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 6.3e-27 124.8 93 68.8
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 6.3e-27 124.8 116 56.9
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 8.3e-27 124.4 181 45.9
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 1.1e-26 124.0 147 49.7
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.1e-26 124.0 81 72.8
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 2.4e-26 122.9 83 71.1
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 2.4e-26 122.9 83 71.1
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 3.1e-26 122.5 95 65.3
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 5.4e-26 121.7 81 71.6
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 5.4e-26 121.7 120 53.3
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 9.1e-26 120.9 95 63.2
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 9.1e-26 120.9 92 63.0
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 1.6e-25 120.2 79 73.4
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 1.6e-25 120.2 175 43.4
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 2.7e-25 119.4 171 43.9
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 4.5e-25 118.6 101 56.4
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 4.5e-25 118.6 100 61.0
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 5.9e-25 118.2 85 64.7
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 5.9e-25 118.2 97 58.8
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 7.7e-25 117.9 90 64.4
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 7.7e-25 117.9 85 64.7
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 7.7e-25 117.9 74 77.0
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 1.3e-24 117.1 79 70.9
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 2.9e-24 115.9 136 50.0
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 2.9e-24 115.9 81 71.6
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 3.8e-24 115.5 98 60.2
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 6.5e-24 114.8 129 52.7
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 6.5e-24 114.8 170 42.4
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 8.5e-24 114.4 91 61.5
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 8.5e-24 114.4 93 63.4
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 1.1e-23 114.0 74 67.6
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 2.5e-23 112.8 168 45.2
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 2.5e-23 112.8 77 64.9
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 5.5e-23 111.7 153 45.8
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 1.2e-22 110.5 118 51.7
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 8.0e-22 107.8 105 52.4
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 2.3e-21 106.3 120 48.3
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 6.8e-21 104.8 116 49.1
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 2.0e-20 103.2 136 48.5
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 1.3e-19 100.5 73 61.6
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 1.1e-18 97.4 58 74.1
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 1.2e-17 94.0 73 64.4
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 8.0e-14 81.3 54 63.0


User provided reference genes

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