Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 1.6e-139 499.6 278 100.0
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 7.5e-134 480.7 284 95.8
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 5.2e-127 458.0 281 93.6
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 2.0e-118 429.5 281 89.0
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 2.0e-118 429.5 281 89.0
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 2.4e-108 396.0 297 80.1
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 9.6e-105 384.0 292 75.7
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 6.0e-99 364.8 288 75.7
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 3.3e-97 359.0 300 74.0
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 3.4e-94 349.0 293 76.1
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 3.2e-84 315.8 277 73.3
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 1.1e-71 274.2 296 63.2
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 1.1e-60 237.7 300 53.3
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 2.6e-49 199.9 228 54.8
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 1.3e-48 197.6 246 54.1
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 6.3e-48 195.3 228 55.7
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 2.2e-45 186.8 247 54.3
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 6.5e-45 185.3 238 51.3
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 1.2e-43 181.0 290 49.3
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.4e-42 177.6 236 55.9
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 3.0e-42 176.4 268 49.6
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 3.0e-42 176.4 267 49.4
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 5.2e-42 175.6 242 50.4
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 6.8e-42 175.3 173 60.7
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 2.0e-41 173.7 238 51.7
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 5.7e-41 172.2 228 50.9
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 5.7e-41 172.2 228 50.9
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 5.7e-41 172.2 142 68.3
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 2.8e-40 169.9 302 43.7
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 4.8e-40 169.1 231 51.1
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 4.8e-40 169.1 250 47.6
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 8.3e-40 168.3 279 45.5
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 5.3e-39 165.6 296 45.9
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 1.2e-38 164.5 189 53.4
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 7.7e-38 161.8 249 46.2
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 1.0e-37 161.4 178 56.2
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 2.2e-37 160.2 164 58.5
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 5.0e-37 159.1 112 83.0
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 6.5e-37 158.7 269 44.2
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 3.2e-36 156.4 141 64.5
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 4.2e-36 156.0 141 63.8
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 4.2e-36 156.0 144 64.6
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 7.2e-36 155.2 275 48.4
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 1.6e-35 154.1 256 46.5
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 2.7e-35 153.3 157 59.2
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 3.6e-35 152.9 144 59.7
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 6.1e-35 152.1 286 44.4
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 8.0e-35 151.8 175 55.4
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 8.0e-35 151.8 271 43.2
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 1.0e-34 151.4 150 56.7
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 1.4e-34 151.0 275 44.0
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.8e-34 150.6 171 54.4
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.8e-34 150.6 171 55.0
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 2.3e-34 150.2 125 63.2
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 2.3e-34 150.2 278 44.2
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 2.3e-34 150.2 158 58.9
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 6.8e-34 148.7 277 43.7
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 6.8e-34 148.7 281 44.1
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 6.8e-34 148.7 232 44.0
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 8.8e-34 148.3 233 43.8
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 8.8e-34 148.3 142 59.2
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 8.8e-34 148.3 238 42.9
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.5e-33 147.5 142 58.5
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 2.6e-33 146.7 145 60.7
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 2.6e-33 146.7 244 43.0
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 2.6e-33 146.7 241 47.3
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 3.4e-33 146.4 167 54.5
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 4.4e-33 146.0 155 54.8
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 5.7e-33 145.6 296 44.3
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 9.8e-33 144.8 109 69.7
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 1.7e-32 144.1 276 38.4
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 2.8e-32 143.3 251 40.6
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.8e-32 142.5 276 38.4
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 8.3e-32 141.7 144 59.0
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 8.3e-32 141.7 169 52.7
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.4e-31 141.0 186 50.5
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 1.8e-31 140.6 152 55.3
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 1.8e-31 140.6 143 58.0
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 1.8e-31 140.6 164 54.9
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 2.4e-31 140.2 105 71.4
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 3.1e-31 139.8 136 58.1
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 3.1e-31 139.8 141 58.2
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 4.1e-31 139.4 177 50.3
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 4.1e-31 139.4 282 39.7
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 5.4e-31 139.0 110 65.5
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 9.1e-31 138.3 152 55.3
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 9.1e-31 138.3 157 52.9
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 1.6e-30 137.5 255 41.6
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 2.0e-30 137.1 166 52.4
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 2.7e-30 136.7 254 45.3
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 1.0e-29 134.8 174 48.3
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 1.0e-29 134.8 193 45.6
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 1.3e-29 134.4 153 50.3
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 2.9e-29 133.3 273 40.7
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 2.9e-29 133.3 100 68.0
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 3.8e-29 132.9 150 55.3
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 5.0e-29 132.5 269 42.0
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 6.6e-29 132.1 223 43.9
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 1.5e-28 131.0 261 44.4
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 7.2e-28 128.6 250 41.6
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 9.5e-28 128.3 231 39.4
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 1.0e-26 124.8 133 55.6
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 2.6e-25 120.2 132 54.5
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.4e-18 97.8 218 37.2
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 1.7e-16 90.9 121 44.6
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.2e-16 90.5 141 42.6
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.6e-14 82.8 95 50.5
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 4.6e-14 82.8 94 50.0
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.0e-13 81.6 93 51.6
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 3.0e-13 80.1 139 36.7
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 3.0e-13 80.1 149 36.2
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 7.3e-12 75.5 55 69.1
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.6e-11 74.3 57 64.9
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.6e-11 74.3 57 64.9
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 2.8e-11 73.6 73 60.3
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 2.8e-11 73.6 147 36.7
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.7e-11 72.8 58 62.1
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 1.5e-09 67.8 45 75.6
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.5e-09 67.8 78 53.8
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 1.5e-09 67.8 50 68.0
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 6.0e-06 55.8 78 39.7


User provided reference genes

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