Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p48260 Brassica napus HOM05D003255 ORTHO05D003705 2.6e-203 711.8 362 100.0
BraA06t27695Z Brassica rapa HOM05D003255 ORTHO05D003705 3.4e-203 711.4 362 99.7
BolC4t24025H Brassica oleracea HOM05D003255 ORTHO05D003705 1.4e-156 556.6 311 92.3
BcaC06g31750 Brassica carinata HOM05D003255 ORTHO05D003705 4.1e-148 528.5 287 93.0
BcaC02g10774 Brassica carinata HOM05D003255 ORTHO05D003705 8.8e-143 510.8 287 92.7
C04p25200 Brassica napus HOM05D003255 ORTHO05D003705 8.8e-143 510.8 287 92.7
AT1G64770 Arabidopsis thaliana HOM05D003255 ORTHO05D003705 2.8e-141 505.8 368 74.2
Sp2g07380 Schrenkiella parvula HOM05D003255 ORTHO05D003705 1.4e-140 503.4 287 87.1
Carub.0002s0974 Capsella rubella HOM05D003255 ORTHO05D003705 8.9e-127 457.6 297 79.8
Thhalv10018808m.g Eutrema salsugineum HOM05D003255 ORTHO05D003705 2.6e-126 456.1 290 79.3
AL2G19130 Arabidopsis lyrata HOM05D003255 ORTHO05D003705 1.7e-125 453.4 296 80.1
CARHR287400 Cardamine hirsuta HOM05D003255 ORTHO05D003705 1.1e-121 440.7 296 77.0
THA.LOC104805763 Tarenaya hassleriana HOM05D003255 ORTHO05D003705 9.9e-110 401.0 301 70.1
Aa31LG2G1910 Aethionema arabicum HOM05D003255 ORTHO05D003705 4.9e-109 398.7 295 70.2
Carub.0002s0972 Capsella rubella HOM05D003255 ORTHO05D003705 1.2e-102 377.5 291 72.2
COL.COLO4_13607 Corchorus olitorius HOM05D003255 ORTHO05D003705 6.6e-98 361.7 305 62.0
Thecc.05G293900 Theobroma cacao HOM05D003255 ORTHO05D003705 1.1e-97 360.9 299 63.5
Cpa.g.sc51.109 Carica papaya HOM05D003255 ORTHO05D003705 2.5e-97 359.8 299 63.5
Gorai.007G288700 Gossypium raimondii HOM05D003255 ORTHO05D003705 2.5e-97 359.8 299 64.5
Gohir.D11G268900 Gossypium hirsutum HOM05D003255 ORTHO05D003705 4.7e-96 355.5 299 64.2
Gohir.A11G258800 Gossypium hirsutum HOM05D003255 ORTHO05D003705 1.1e-95 354.4 299 63.5
Manes.09G141900 Manihot esculenta HOM05D003255 ORTHO05D003705 1.8e-95 353.6 297 63.6
CiPaw.10G000800 Carya illinoinensis HOM05D003255 ORTHO05D003705 3.0e-90 336.3 300 60.3
Ciclev10020997m.g Citrus clementina HOM05D003255 ORTHO05D003705 8.7e-90 334.7 296 62.5
Cfa016436 Carpinus fangiana HOM05D003255 ORTHO05D003705 1.1e-89 334.3 300 59.7
Haze_19413 Corylus avellana HOM05D003255 ORTHO05D003705 1.9e-89 333.6 301 60.5
Duzib128G1885 Durio zibethinus HOM05D003255 ORTHO05D003705 5.6e-89 332.0 297 59.9
Atru.chr2.1363 Acer truncatum HOM05D003255 ORTHO05D003705 1.3e-88 330.9 298 59.4
MD17G1264700 Malus domestica HOM05D003255 ORTHO05D003705 3.6e-88 329.3 299 59.2
FvH4_6g27680 Fragaria vesca HOM05D003255 ORTHO05D003705 6.2e-88 328.6 298 59.1
FAN05G4616 Fragaria x ananassa HOM05D003255 ORTHO05D003705 6.2e-88 328.6 298 59.1
FAN09G1185 Fragaria x ananassa HOM05D003255 ORTHO05D003705 6.2e-88 328.6 298 59.1
FAN14G1820 Fragaria x ananassa HOM05D003255 ORTHO05D003705 6.2e-88 328.6 298 59.1
Prupe.3G114100 Prunus persica HOM05D003255 ORTHO05D003705 1.4e-87 327.4 301 58.1
Eucgr.K01497 Eucalyptus grandis HOM05D003255 ORTHO05D003705 1.8e-87 327.0 259 63.7
FAN02G2038 Fragaria x ananassa HOM05D003255 ORTHO05D006458 4.0e-87 325.9 298 58.4
RcHm_v2.0_Chr2g0130821 Rosa chinensis HOM05D003255 ORTHO05D003705 9.0e-87 324.7 298 60.1
Dinv14582 Davidia involucrata HOM05D003255 ORTHO05D003705 2.0e-86 323.6 298 58.1
Lj1A1137T81 Lonicera japonica HOM05D003255 ORTHO05D003705 2.0e-86 323.6 292 55.1
PGR142G0348 Punica granatum HOM05D003255 ORTHO05D003705 3.4e-86 322.8 260 62.7
Actinidia30555 Actinidia chinensis HOM05D003255 ORTHO05D003705 5.8e-86 322.0 294 57.1
Hma1.2p1_0152F.1_g067770 Hydrangea macrophylla HOM05D003255 ORTHO05D003705 2.9e-85 319.7 292 58.6
Aqoxy2G00585 Aquilegia oxysepala HOM05D003255 ORTHO05D003705 1.4e-84 317.4 302 54.6
GSVIVG01033393001 Vitis vinifera HOM05D003255 ORTHO05D003705 1.2e-83 314.3 274 59.5
SalBow6G7123 Salvia bowleyana HOM05D003255 ORTHO05D003705 1.3e-82 310.8 295 54.9
TWI32G0868 Tripterygium wilfordii HOM05D003255 ORTHO05D003705 3.9e-82 309.3 304 56.9
arahy.Tifrunner.gnm1.ann1.1MDK5L Arachis hypogaea HOM05D003255 ORTHO05D003705 8.7e-82 308.1 294 56.5
arahy.Tifrunner.gnm1.ann1.G0TJBI Arachis hypogaea HOM05D003255 ORTHO05D003705 8.7e-82 308.1 294 56.5
vmacro12569 Vaccinium macrocarpon HOM05D003255 ORTHO05D003705 1.5e-81 307.4 310 53.9
Lalb_Chr22g0359271 Lupinus albus HOM05D003255 ORTHO05D003705 3.3e-81 306.2 300 56.0
Potri.019G034100 Populus trichocarpa HOM05D003255 ORTHO05D003705 9.6e-81 304.7 300 55.7
Sabra19G0042000 Salix brachista HOM05D003255 ORTHO05D003705 8.1e-80 301.6 299 55.2
Rhsim09G0004800 Rhododendron simsii HOM05D003255 ORTHO05D003705 1.1e-79 301.2 307 52.1
AUR62032686 Chenopodium quinoa HOM05D003255 ORTHO05D003705 1.8e-79 300.4 320 52.2
CsaV3_3G043290 Cucumis sativus L. HOM05D003255 ORTHO05D003705 1.8e-79 300.4 268 57.8
Nitab4.5_0002825g0020 Nicotiana tabacum HOM05D003255 ORTHO05D003705 1.8e-79 300.4 292 55.5
QL07p019702 Quercus lobata HOM05D003255 ORTHO05D003705 1.8e-79 300.4 302 57.0
Lj1g0023757 Lotus japonicus HOM05D003255 ORTHO05D003705 2.4e-79 300.1 295 58.0
EL10Ac3g06815 Beta vulgaris HOM05D003255 ORTHO05D003705 4.0e-79 299.3 320 51.9
HanXRQChr02g0054161 Helianthus annuus HOM05D003255 ORTHO05D003705 9.0e-79 298.1 291 54.6
AUR62032061 Chenopodium quinoa HOM05D003255 ORTHO05D003705 1.2e-78 297.7 317 52.1
Glyma.19G110700 Glycine max HOM05D003255 ORTHO05D003705 1.2e-78 297.7 294 57.5
Ah.04g153230 Amaranthus hybridus HOM05D003255 ORTHO05D003705 1.5e-78 297.4 301 52.8
Nitab4.5_0000001g0080 Nicotiana tabacum HOM05D003255 ORTHO05D003705 2.0e-78 297.0 291 56.0
Lsat_1_v5_gn_6_36921 Lactuca sativa HOM05D003255 ORTHO05D003705 2.6e-78 296.6 269 58.4
ECA233G1992 Erigeron canadensis HOM05D003255 ORTHO05D003705 4.5e-78 295.8 296 55.1
MELO3C026889.2 Cucumis melo HOM05D003255 ORTHO05D003705 5.8e-78 295.4 268 56.7
Medtr7g085490 Medicago truncatula HOM05D003255 ORTHO05D003705 7.6e-78 295.0 296 57.1
unitig_746.g26891 Utricularia gibba HOM05D000423 ORTHO05D000284 1.3e-77 294.3 296 55.4
Migut.J01892 Erythranthe guttata HOM05D003255 ORTHO05D003705 1.7e-77 293.9 284 54.9
CAN.G317.15 Capsicum annuum HOM05D003255 ORTHO05D003705 2.2e-77 293.5 261 57.1
Peaxi162Scf00076g01039 Petunia axillaris HOM05D003255 ORTHO05D003705 2.2e-77 293.5 276 56.5
PSO384G0936 Papaver somniferum HOM05D003255 ORTHO05D003705 2.9e-77 293.1 298 53.4
Solyc03g062720.3 Solanum lycopersicum HOM05D003255 ORTHO05D003705 2.9e-77 293.1 274 56.2
PGSC0003DMG400008639 Solanum tuberosum HOM05D003255 ORTHO05D003705 2.9e-77 293.1 268 56.3
Oeu012405.1 Olea europaea HOM05D003255 ORTHO05D003705 3.8e-77 292.7 301 53.2
PSO339G4182 Papaver somniferum HOM05D003255 ORTHO05D003705 3.8e-77 292.7 298 54.0
Sopen03g015030 Solanum pennellii HOM05D003255 ORTHO05D003705 3.8e-77 292.7 269 56.1
Glyma.16G041700 Glycine max HOM05D003255 ORTHO05D003705 1.1e-76 291.2 300 56.0
Sed0025392 Sechium edule HOM05D003255 ORTHO05D003705 1.4e-76 290.8 256 58.2
CDE05G3425 Ceratophyllum demersum HOM05D003255 ORTHO05D003705 3.2e-76 289.7 273 53.8
Ca_08260_v3 Cicer arietinum L. HOM05D003255 ORTHO05D003705 3.2e-76 289.7 296 55.1
VMungo1383G0405 Vigna mungo HOM05D003255 ORTHO05D003705 3.5e-75 286.2 298 55.0
Psat3g089080 Pisum sativum HOM05D003255 ORTHO05D003705 4.6e-75 285.8 296 55.4
Cc06_g22890 Coffea canephora HOM05D003255 ORTHO05D003705 2.3e-74 283.5 305 51.5
CANSAT78G2239 Cannabis sativa HOM05D003255 ORTHO05D003705 3.0e-74 283.1 278 54.7
Phvul.001G110100 Phaseolus vulgaris HOM05D003255 ORTHO05D003705 3.0e-74 283.1 294 54.8
Actinidia22086 Actinidia chinensis HOM05D003255 ORTHO05D003705 8.7e-74 281.6 227 61.7
Nn7g35822 Nelumbo nucifera HOM05D003255 ORTHO05D003705 1.1e-73 281.2 260 56.9
Zm00001eb004410 Zea mays HOM05D003255 ORTHO05D003705 2.8e-72 276.6 265 54.3
TAR623G0824 Trochodendron aralioides HOM05D003255 ORTHO05D003705 4.8e-72 275.8 272 54.8
Zm00001eb403240 Zea mays HOM05D003255 ORTHO05D003705 3.1e-71 273.1 259 52.9
ClCG10G013330 Citrullus lanatus HOM05D003255 ORTHO05D003705 2.0e-70 270.4 265 55.5
Os03g0158300 Oryza sativa ssp. japonica HOM05D003255 ORTHO05D003705 3.4e-70 269.6 303 49.2
TPR.G5890 Trifolium pratense HOM05D003255 ORTHO05D003705 1.3e-69 267.7 260 58.1
CSS0029701 Camellia sinensis var. sinensis HOM05D003255 ORTHO05D003705 3.9e-66 256.1 302 51.0
THA.LOC104814754 Tarenaya hassleriana HOM05D003255 ORTHO05D003705 3.9e-66 256.1 147 81.0
CDE01G0333 Ceratophyllum demersum HOM05D003255 ORTHO05D003705 2.5e-65 253.4 243 52.7
ATR0697G035 Amborella trichopoda HOM05D003255 ORTHO05D003705 4.8e-64 249.2 280 50.0
CSS0030388 Camellia sinensis var. sinensis HOM05D003255 ORTHO05D003705 1.5e-49 201.1 213 55.4
Hund24838 Selenicereus undatus HOM05D003255 ORTHO05D003705 2.2e-48 197.2 242 47.9
DCAR_013690 Daucus carota HOM05D003255 ORTHO05D003705 2.2e-45 187.2 298 42.6
CDE02G4790 Ceratophyllum demersum HOM05D003255 ORTHO05D003705 5.0e-45 186.0 168 54.8
SEGI_06106 Sequoiadendron giganteum HOM05D003255 ORTHO05D003705 3.5e-30 136.7 257 35.8
Rhsim03G0001400 Rhododendron simsii HOM05D003255 ORTHO05D003705 2.1e-19 100.9 128 43.8
Rhsim03G0005300 Rhododendron simsii HOM05D003255 ORTHO05D003705 8.9e-18 95.5 186 38.7
Mapoly0135s0022 Marchantia polymorpha HOM05D003255 ORTHO05D003705 1.3e-16 91.7 282 30.9
AagrBONN_evm.TU.Sc2ySwM_368.2197 Anthoceros agrestis HOM05D003255 ORTHO05D003705 4.1e-15 86.7 231 33.3
Aqoxy2G00586 Aquilegia oxysepala HOM05D003255 ORTHO05D003705 6.1e-11 72.8 255 25.9
Potri.013G058601 Populus trichocarpa HOM05D003255 ORTHO05D003705 1.0e-10 72.0 54 57.4
TPR.G39773 Trifolium pratense HOM05D003255 ORTHO05D003705 6.8e-10 69.3 54 63.0
AagrBONN_evm.TU.Sc2ySwM_368.2200 Anthoceros agrestis HOM05D003255 ORTHO05D003705 8.9e-10 68.9 168 35.7
Rhsim11G0022200 Rhododendron simsii HOM05D003255 ORTHO05D003705 5.4e-07 59.7 56 50.0


User provided reference genes

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