Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.5e-198 696.0 356 100.0
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 5.2e-196 687.6 356 99.4
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 7.7e-192 673.7 356 96.1
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 7.7e-192 673.7 356 96.1
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 1.4e-188 662.9 334 97.3
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 4.0e-188 661.4 351 92.9
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.6e-181 639.4 356 91.6
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 1.9e-177 625.9 351 89.5
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 6.6e-175 617.5 357 85.2
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 1.1e-174 616.7 356 84.8
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.4e-172 609.8 324 90.4
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 3.3e-166 588.6 336 85.7
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 3.6e-165 585.1 324 86.1
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.4e-148 530.0 316 80.4
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 3.7e-133 478.8 329 69.9
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 4.8e-133 478.4 322 71.1
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 4.0e-132 475.3 322 70.8
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 5.3e-132 474.9 322 71.4
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 9.0e-132 474.2 322 70.8
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 1.2e-131 473.8 322 70.5
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.5e-131 473.4 322 70.5
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.0e-131 473.0 323 70.6
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.0e-131 473.0 322 70.2
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 1.3e-130 470.3 322 70.5
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 2.9e-130 469.2 313 72.2
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 6.5e-130 468.0 325 69.2
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 2.5e-129 466.1 317 70.3
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 3.2e-129 465.7 322 70.5
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 4.2e-129 465.3 316 69.6
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 5.5e-129 464.9 316 70.9
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 5.5e-129 464.9 316 70.6
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 1.2e-128 463.8 322 70.2
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 6.0e-128 461.5 321 68.2
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 7.9e-128 461.1 316 69.6
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 7.9e-128 461.1 316 70.9
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.0e-127 460.7 326 67.5
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 1.3e-127 460.3 323 69.3
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 1.8e-127 459.9 321 67.9
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.8e-127 459.9 319 69.0
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.3e-127 459.5 319 68.3
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 8.7e-127 457.6 315 69.8
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 9.6e-126 454.1 328 66.5
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.1e-125 453.0 317 70.0
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 4.8e-125 451.8 316 68.4
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 4.8e-125 451.8 322 68.0
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 6.2e-125 451.4 322 66.8
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 6.2e-125 451.4 325 66.8
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 8.2e-125 451.1 317 67.8
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 1.1e-124 450.7 326 65.3
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 2.4e-124 449.5 335 64.8
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 4.1e-124 448.7 323 67.5
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 4.1e-124 448.7 319 67.7
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 6.9e-124 448.0 326 65.3
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 9.0e-124 447.6 323 66.3
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.2e-123 447.2 323 67.2
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 3.4e-123 445.7 326 64.4
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 7.6e-123 444.5 326 65.0
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.2e-122 443.0 322 67.7
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.2e-122 443.0 323 66.3
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 2.9e-122 442.6 328 64.9
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 6.5e-122 441.4 316 67.1
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 8.4e-122 441.0 308 67.5
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 1.9e-121 439.9 335 63.3
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 3.2e-121 439.1 321 67.9
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 4.2e-121 438.7 317 65.0
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 7.2e-121 438.0 317 66.2
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 1.2e-120 437.2 321 65.4
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 2.1e-120 436.4 315 65.1
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.7e-120 436.0 323 64.7
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.1e-120 434.9 312 65.7
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 7.9e-120 434.5 322 65.5
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.0e-119 434.1 323 65.0
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.1e-118 430.6 328 63.1
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.5e-118 430.3 314 64.6
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.5e-118 430.3 317 64.0
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 1.9e-118 429.9 317 64.4
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 4.3e-118 428.7 308 65.3
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 6.3e-117 424.9 317 67.5
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 8.2e-117 424.5 320 64.4
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 3.1e-116 422.5 317 62.1
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.4e-115 419.1 298 68.8
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.0e-114 417.5 330 62.1
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.0e-114 417.5 322 63.0
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 3.8e-114 415.6 317 63.1
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.3e-110 402.5 323 61.0
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 5.7e-110 401.7 321 61.4
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 7.4e-110 401.4 322 63.0
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.6e-104 382.5 320 59.1
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 1.6e-99 367.1 313 57.2
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 3.2e-97 359.4 320 57.2
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 8.8e-95 351.3 312 57.7
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 3.3e-94 349.4 280 63.6
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 2.2e-93 346.7 309 56.0
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 4.1e-84 315.8 305 53.4
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 5.4e-84 315.5 307 54.7
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 1.1e-81 307.8 316 49.1
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.0e-79 301.2 203 71.4
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.8e-76 290.4 244 59.8
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 7.0e-76 288.5 201 67.2
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 3.7e-69 266.2 226 59.7
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 7.3e-65 251.9 187 62.6
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.5e-62 244.2 157 75.2
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.3e-58 231.1 130 81.5
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.0e-58 229.9 164 65.9
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 8.6e-58 228.4 176 61.4
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 6.4e-53 212.2 281 43.8
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.0e-50 204.9 156 65.4
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.8e-47 194.1 245 46.1
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.6e-43 181.0 148 58.8
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 5.8e-38 162.5 86 83.7
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.9e-36 157.5 121 63.6
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.5e-33 147.9 136 55.9
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 5.3e-23 112.8 111 52.3
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 7.9e-19 99.0 92 51.1
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.0e-18 98.6 72 65.3
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 3.4e-14 83.6 156 36.5
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 2.9e-13 80.5 82 51.2
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 4.2e-12 76.6 171 31.6
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 4.1e-07 60.1 175 29.1
Cre16.g677600 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 7.6e-06 55.8 173 29.5


User provided reference genes

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