Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 8.7e-120 433.7 229 100.0
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 1.1e-117 426.8 233 97.9
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 1.6e-113 412.9 233 95.7
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 1.6e-113 412.9 233 95.7
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 1.1e-109 400.2 233 92.3
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 1.2e-108 396.7 225 95.1
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 2.1e-102 375.9 236 88.1
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 3.8e-99 365.2 233 85.0
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 1.1e-95 353.6 233 81.1
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 4.3e-95 351.7 233 81.5
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 5.3e-93 344.7 237 80.2
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 7.7e-92 340.9 226 83.2
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 1.2e-65 253.8 223 64.6
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 4.8e-54 215.3 153 77.8
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 2.0e-47 193.4 225 50.2
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.7e-46 190.3 228 49.6
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 6.3e-46 188.3 226 50.4
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 5.4e-45 185.3 225 49.8
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 4.5e-44 182.2 229 48.5
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 2.3e-43 179.9 227 49.3
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 3.9e-43 179.1 227 48.9
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 5.0e-43 178.7 227 48.9
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 5.0e-43 178.7 240 47.5
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 1.9e-42 176.8 229 48.5
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 2.5e-42 176.4 227 47.6
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 3.3e-42 176.0 240 47.5
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 4.3e-42 175.6 229 48.0
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 4.3e-42 175.6 247 44.9
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 7.3e-42 174.9 236 45.8
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 1.2e-41 174.1 247 45.7
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 2.1e-41 173.3 247 44.9
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 2.8e-41 172.9 238 45.4
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 2.8e-41 172.9 227 47.1
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 4.7e-41 172.2 228 49.1
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 6.1e-41 171.8 225 47.6
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 6.1e-41 171.8 227 47.6
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 8.0e-41 171.4 228 46.9
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 1.4e-40 170.6 240 47.9
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 2.3e-40 169.9 229 48.9
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 3.1e-40 169.5 228 47.4
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 3.1e-40 169.5 239 45.6
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 4.0e-40 169.1 239 44.8
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 5.2e-40 168.7 245 45.7
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 6.8e-40 168.3 247 45.3
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 6.8e-40 168.3 233 45.5
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 6.8e-40 168.3 228 46.1
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 8.9e-40 167.9 228 45.6
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 1.5e-39 167.2 237 43.5
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 1.5e-39 167.2 228 45.2
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 2.6e-39 166.4 227 46.3
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 2.6e-39 166.4 225 45.8
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 3.4e-39 166.0 225 45.8
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 3.4e-39 166.0 225 47.1
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 4.4e-39 165.6 227 44.1
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 4.4e-39 165.6 231 44.6
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 9.8e-39 164.5 233 47.6
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 9.8e-39 164.5 233 45.1
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 1.3e-38 164.1 231 46.3
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 1.3e-38 164.1 227 47.6
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 8.3e-38 161.4 226 47.8
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 2.4e-37 159.8 231 43.3
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 3.2e-37 159.5 236 46.2
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 2.0e-36 156.8 238 44.1
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 2.0e-36 156.8 254 41.7
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 2.7e-36 156.4 254 40.9
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 4.6e-36 155.6 229 39.7
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 6.0e-36 155.2 242 41.7
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 7.8e-36 154.8 227 41.4
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 1.0e-35 154.5 237 41.4
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 2.3e-35 153.3 253 41.5
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 3.9e-35 152.5 226 42.0
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 2.5e-34 149.8 196 47.4
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 2.5e-34 149.8 213 44.1
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 2.5e-34 149.8 213 45.1
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 4.3e-34 149.1 231 42.9
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 9.5e-34 147.9 250 42.4
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 1.2e-33 147.5 295 38.6
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 3.6e-33 146.0 233 44.2
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 4.7e-33 145.6 230 41.3
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 4.7e-33 145.6 207 45.9
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 4.7e-33 145.6 234 42.7
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 4.7e-33 145.6 248 41.1
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 2.3e-32 143.3 236 43.6
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 2.3e-32 143.3 225 41.3
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 5.2e-32 142.1 194 44.8
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 1.2e-31 141.0 204 45.6
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 3.7e-30 136.0 202 43.6
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 4.9e-30 135.6 205 46.3
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 1.4e-29 134.0 233 39.5
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 7.1e-29 131.7 226 41.6
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 7.1e-29 131.7 217 42.4
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 1.5e-26 124.0 194 41.8
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 1.4e-24 117.5 106 59.4
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 4.0e-24 115.9 253 35.2
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 4.0e-24 115.9 226 38.5
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 6.8e-24 115.2 103 57.3
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 6.8e-24 115.2 190 40.0
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 8.9e-24 114.8 197 36.5
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 2.6e-23 113.2 103 57.3
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 9.9e-23 111.3 103 57.3
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.9e-22 109.0 111 55.0
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.9e-22 109.0 111 55.0
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 6.4e-22 108.6 96 55.2
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 3.2e-21 106.3 285 33.0
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 9.2e-21 104.8 246 31.7
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 1.6e-20 104.0 111 50.5
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 6.0e-20 102.1 261 34.1
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 2.3e-19 100.1 168 42.3
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 8.1e-17 91.7 258 32.2
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 3.1e-16 89.7 95 51.6
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 2.6e-15 86.7 164 39.6
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 3.4e-15 86.3 164 39.6
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 4.4e-15 85.9 167 38.3
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 8.4e-14 81.6 272 30.1
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 8.4e-14 81.6 245 30.2
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 1.1e-13 81.3 62 64.5
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 1.1e-13 81.3 62 61.3
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.9e-13 80.5 62 58.1
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 2.7e-12 76.6 161 37.3
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 3.5e-12 76.3 50 68.0
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 1.0e-11 74.7 102 45.1
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 1.3e-11 74.3 83 48.2
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 3.9e-11 72.8 163 37.4
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 8.7e-11 71.6 219 30.1
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 3.6e-09 66.2 163 33.1
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 1.1e-08 64.7 139 36.7
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 5.8e-07 58.9 62 48.4
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.9e-06 55.8 129 34.9
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 4.9e-06 55.8 221 26.7
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 8.4e-06 55.1 140 32.9


User provided reference genes

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