Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p45410 Brassica napus HOM05D008727 ORTHO05D011379 2.5e-96 355.5 187 100.0
BraA06t27409Z Brassica rapa HOM05D008727 ORTHO05D011379 2.1e-95 352.4 187 99.5
BcaC06g34300 Brassica carinata HOM05D008727 ORTHO05D011379 1.1e-91 340.1 187 95.2
C07p30610 Brassica napus HOM05D008727 ORTHO05D011379 9.0e-91 337.0 187 94.7
BolC7t43601H Brassica oleracea HOM05D008727 ORTHO05D011379 9.0e-91 337.0 187 94.7
BcaC06g31427 Brassica carinata HOM05D008727 ORTHO05D011379 1.0e-70 270.4 182 75.3
A06p45400 Brassica napus HOM05D008727 ORTHO05D011379 8.5e-65 250.8 184 71.2
C07p30620 Brassica napus HOM05D008727 ORTHO05D011379 8.5e-65 250.8 184 71.2
BolC7t43602H Brassica oleracea HOM05D008727 ORTHO05D011379 1.5e-64 250.0 184 71.2
BraA06t27408Z Brassica rapa HOM05D008727 ORTHO05D011379 1.5e-64 250.0 184 70.7
BcaC06g31426 Brassica carinata HOM05D008727 ORTHO05D011379 9.4e-64 247.3 182 70.9
BcaC06g34299 Brassica carinata HOM05D008727 ORTHO05D011379 8.0e-63 244.2 182 70.3
BcaB07g30480 Brassica carinata HOM05D008727 ORTHO05D011379 3.5e-58 228.8 181 67.4
BolC9t60173H Brassica oleracea HOM05D008727 ORTHO05D011379 3.2e-56 222.2 174 67.2
A06p45420 Brassica napus HOM05D008727 ORTHO05D011379 1.6e-55 219.9 173 65.9
BraA06t27410Z Brassica rapa HOM05D008727 ORTHO05D011379 1.6e-55 219.9 173 65.9
C09p74390 Brassica napus HOM05D008727 ORTHO05D011379 6.1e-55 218.0 174 66.7
BcaC06g31428 Brassica carinata HOM05D008727 ORTHO05D011379 4.4e-53 211.8 161 67.7
BraA10t45379Z Brassica rapa HOM05D008727 ORTHO05D011379 2.0e-50 203.0 180 62.2
A10p33490 Brassica napus HOM05D008727 ORTHO05D011379 5.0e-49 198.4 180 62.2
Thhalv10001116m.g Eutrema salsugineum HOM05D008727 ORTHO05D011379 6.1e-47 191.4 179 58.1
BcaNung04448 Brassica carinata HOM05D008727 ORTHO05D011379 2.0e-45 186.4 140 69.3
AL1G65050 Arabidopsis lyrata HOM05D008727 ORTHO05D011379 2.2e-44 183.0 179 56.4
Carub.0002s0896 Capsella rubella HOM05D008727 ORTHO05D011379 2.8e-44 182.6 179 55.3
AT1G54620 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 1.1e-43 180.6 185 55.1
Sp2g11770 Schrenkiella parvula HOM05D008727 ORTHO05D011379 5.6e-40 168.3 177 53.1
Sp2g11780 Schrenkiella parvula HOM05D008727 ORTHO05D001261 7.2e-40 167.9 176 52.8
AT5G46980 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 8.0e-39 164.5 178 53.4
Thhalv10001202m.g Eutrema salsugineum HOM05D008727 ORTHO05D001261 4.0e-38 162.2 178 50.0
AT5G46990 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 4.4e-37 158.7 176 48.9
Sp2g11790 Schrenkiella parvula HOM05D008727 ORTHO05D001261 9.8e-37 157.5 177 51.4
Carub.0008s0084 Capsella rubella HOM05D008727 ORTHO05D011379 8.3e-36 154.5 176 47.7
Carub.0008s0086 Capsella rubella HOM05D008727 ORTHO05D011379 2.7e-34 149.4 186 44.1
Carub.0008s0088 Capsella rubella HOM05D008727 ORTHO05D011379 7.8e-34 147.9 166 52.4
BcaC03g16915 Brassica carinata HOM05D008727 ORTHO05D023847 5.6e-32 141.7 176 50.6
C02p48180 Brassica napus HOM05D008727 ORTHO05D023847 5.6e-32 141.7 176 50.6
BolC2t10850H Brassica oleracea HOM05D008727 ORTHO05D023847 2.1e-31 139.8 176 50.0
A02p30610 Brassica napus HOM05D008727 ORTHO05D023847 1.4e-30 137.1 176 49.4
BraA02t08079Z Brassica rapa HOM05D008727 ORTHO05D023847 1.4e-30 137.1 176 49.4
CARHR055710 Cardamine hirsuta HOM05D008727 ORTHO05D011379 4.0e-30 135.6 178 44.9
BcaC06g34301 Brassica carinata HOM05D008727 ORTHO05D011379 5.0e-25 118.6 138 47.1
Carub.0008s0089 Capsella rubella HOM05D001445 ORTHO05D001261 2.2e-20 103.2 178 38.8
AL8G11310 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 3.2e-19 99.4 179 38.0
AL8G11340 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 1.3e-17 94.0 179 35.2
Aa31LG9G5990 Aethionema arabicum HOM05D001445 ORTHO05D001261 5.1e-17 92.0 171 37.4
AT5G46930 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 8.6e-17 91.3 179 36.9
Aa31sc241G40 Aethionema arabicum HOM05D001445 ORTHO05D001261 1.9e-16 90.1 179 34.6
Sp2g11760 Schrenkiella parvula HOM05D001445 ORTHO05D001261 2.5e-16 89.7 179 36.3
Aa31sc241G60 Aethionema arabicum HOM05D001445 ORTHO05D001261 3.3e-16 89.4 179 34.6
Thhalv10001100m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 4.3e-16 89.0 179 35.8
Sp2g11720 Schrenkiella parvula HOM05D001445 ORTHO05D001261 7.3e-16 88.2 179 34.6
CARHR174500 Cardamine hirsuta HOM05D001445 ORTHO05D001261 9.5e-16 87.8 178 34.8
AL8G11330 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 1.2e-15 87.4 178 34.8
AT5G46970 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 1.2e-15 87.4 172 36.0
Sp2g11740 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.2e-15 87.4 175 33.1
AL8G11300 Arabidopsis lyrata HOM05D008727 ORTHO05D011379 1.6e-15 87.0 135 41.5
Carub.0008s0091 Capsella rubella HOM05D001445 ORTHO05D001261 4.7e-15 85.5 177 35.0
Carub.0008s0092 Capsella rubella HOM05D001445 ORTHO05D001261 4.7e-15 85.5 179 34.1
AT5G46940 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 6.2e-15 85.1 178 35.4
Carub.0008s0090 Capsella rubella HOM05D001445 ORTHO05D001261 4.0e-14 82.4 177 35.0
BcaB07g30808 Brassica carinata HOM05D001445 ORTHO05D001261 5.2e-14 82.0 178 34.8
C02p48090 Brassica napus HOM05D001445 ORTHO05D001261 5.2e-14 82.0 178 33.7
BolC2t10840H Brassica oleracea HOM05D001445 ORTHO05D001261 5.2e-14 82.0 178 33.7
A02p30560 Brassica napus HOM05D001445 ORTHO05D001261 1.5e-13 80.5 177 34.5
C03p62420 Brassica napus HOM05D001445 ORTHO05D001261 3.4e-13 79.3 178 33.1
BolC3t18500H Brassica oleracea HOM05D001445 ORTHO05D001261 3.4e-13 79.3 178 33.7
CANSAT21G0328 Cannabis sativa HOM05D001445 ORTHO05D001261 3.4e-13 79.3 176 30.1
Thhalv10001105m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 4.4e-13 79.0 177 35.0
Thhalv10001199m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 5.8e-13 78.6 178 34.8
A02p30180 Brassica napus HOM05D001445 ORTHO05D001261 1.3e-12 77.4 178 33.7
CARHR174480 Cardamine hirsuta HOM05D001445 ORTHO05D001261 1.3e-12 77.4 161 35.4
COL.COLO4_17127 Corchorus olitorius HOM05D001445 ORTHO05D001261 1.3e-12 77.4 167 30.5
BraA02t08034Z Brassica rapa HOM05D001445 ORTHO05D001261 1.7e-12 77.0 178 33.7
TWI15G1112 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 8.4e-12 74.7 185 29.2
BolC7t43597H Brassica oleracea HOM05D008727 ORTHO05D040202 1.4e-11 73.9 58 62.1
Sp2g11750 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.9e-11 73.6 175 33.1
A02p30590 Brassica napus HOM05D001445 ORTHO05D001261 3.2e-11 72.8 178 31.5
BraA02t08076Z Brassica rapa HOM05D001445 ORTHO05D001261 3.2e-11 72.8 180 33.3
Duzib205G0415 Durio zibethinus HOM05D001445 ORTHO05D001261 3.2e-11 72.8 164 32.3
A02p30580 Brassica napus HOM05D001445 ORTHO05D001261 5.4e-11 72.0 180 33.3
BraA02t08073Z Brassica rapa HOM05D001445 ORTHO05D001261 5.4e-11 72.0 179 33.5
BcaB01g05448 Brassica carinata HOM05D001445 ORTHO05D001261 2.1e-10 70.1 176 29.0
C07p30580 Brassica napus HOM05D008727 ORTHO05D040202 2.1e-10 70.1 53 64.2
Prupe.5G048900 Prunus persica HOM05D001445 ORTHO05D001261 2.1e-10 70.1 168 28.0
COL.COLO4_17126 Corchorus olitorius HOM05D001445 ORTHO05D001261 2.7e-10 69.7 167 29.9
MELO3C003367.2 Cucumis melo HOM05D001445 ORTHO05D001261 3.5e-10 69.3 152 29.6
AL8G11320 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 1.3e-09 67.4 177 29.4
BcaC03g16906 Brassica carinata HOM05D001445 ORTHO05D001261 1.7e-09 67.0 170 31.8
MD06G1042400 Malus domestica HOM05D001445 ORTHO05D001261 2.3e-09 66.6 184 27.7
BcaB07g30804 Brassica carinata HOM05D001445 ORTHO05D001261 2.5e-08 63.2 181 30.4
Sp2g11730 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.6e-07 60.5 178 30.9
Thecc.01G402600 Theobroma cacao HOM05D001445 ORTHO05D001261 2.1e-07 60.1 182 25.8
PSO782G4131 Papaver somniferum HOM05D001445 ORTHO05D001261 4.7e-07 58.9 162 27.2
BcaB08g36203 Brassica carinata HOM05D001445 ORTHO05D001261 8.1e-07 58.2 178 30.3
Phvul.010G041500 Phaseolus vulgaris HOM05D001445 ORTHO05D001261 1.1e-06 57.8 165 24.8
PSO478G4988 Papaver somniferum HOM05D001445 ORTHO05D001261 1.8e-06 57.0 166 30.7
TAR375G0630 Trochodendron aralioides HOM05D001445 ORTHO05D001261 3.1e-06 56.2 118 29.7
A09p22680 Brassica napus HOM05D001445 ORTHO05D001261 4.0e-06 55.8 181 28.7
Duzib133G0634 Durio zibethinus HOM05D001445 ORTHO05D001261 4.0e-06 55.8 182 24.7
BcaC04g21667 Brassica carinata HOM05D001445 ORTHO05D001261 8.9e-06 54.7 178 29.2
C09p29170 Brassica napus HOM05D001445 ORTHO05D001261 8.9e-06 54.7 181 28.2


User provided reference genes

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