Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p44950 Brassica napus HOM05D008086 ORTHO05D004972 3.2e-147 525.0 253 100.0
BraA06t27366Z Brassica rapa HOM05D008086 ORTHO05D004972 5.8e-141 504.2 241 100.0
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 5.4e-131 471.1 242 93.8
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 1.7e-129 466.1 242 93.4
BcaC06g31366 Brassica carinata HOM05D008086 ORTHO05D004972 4.9e-124 448.0 241 88.0
BcaC06g31364 Brassica carinata HOM05D008086 ORTHO05D004972 5.9e-93 344.7 240 70.4
A06p44930 Brassica napus HOM05D008086 ORTHO05D004972 1.7e-92 343.2 237 70.9
BraA06t27364Z Brassica rapa HOM05D008086 ORTHO05D004972 1.7e-92 343.2 237 70.9
BcaC06g34235 Brassica carinata HOM05D008086 ORTHO05D004972 3.2e-91 339.0 237 70.9
C07p31290 Brassica napus HOM05D008086 ORTHO05D004972 3.2e-91 339.0 238 70.2
C07p31250 Brassica napus HOM05D008086 ORTHO05D004972 7.9e-90 334.3 236 69.1
BolC7t43666H Brassica oleracea HOM05D008086 ORTHO05D004972 1.0e-89 334.0 237 69.6
Thhalv10001213m.g Eutrema salsugineum HOM05D008086 ORTHO05D004972 1.8e-89 333.2 205 78.5
BcaC06g34237 Brassica carinata HOM05D008086 ORTHO05D004972 2.2e-87 326.2 262 64.1
AL8G10360 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 9.1e-86 320.9 244 68.0
BcaC06g31356 Brassica carinata HOM05D008086 ORTHO05D004972 2.5e-83 312.8 269 60.6
AL8G10380 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 7.2e-83 311.2 236 68.2
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 1.6e-82 310.1 253 60.5
CARHR173730 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.1e-80 303.9 258 60.5
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 1.5e-80 303.5 248 59.7
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 1.5e-80 303.5 248 59.7
CARHR173760 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.0e-80 303.1 242 64.5
Carub.0008s0020 Capsella rubella HOM05D008086 ORTHO05D004972 8.2e-79 297.7 244 64.8
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 1.2e-77 293.9 248 58.9
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 1.2e-77 293.9 248 58.9
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 1.5e-77 293.5 260 57.3
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 1.5e-77 293.5 248 58.9
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 2.0e-77 293.1 248 58.9
BcaC06g31429 Brassica carinata HOM05D008086 ORTHO05D004972 2.6e-77 292.7 260 57.7
C07p30570 Brassica napus HOM05D008086 ORTHO05D004972 1.7e-76 290.0 246 57.7
CARHR174690 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.2e-76 289.7 242 61.2
BolC9t58045H Brassica oleracea HOM05D008086 ORTHO05D004972 3.8e-76 288.9 238 60.1
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 5.5e-75 285.0 244 57.8
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 5.5e-75 285.0 251 57.8
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 8.8e-73 277.7 213 64.3
A06p45430 Brassica napus HOM05D008086 ORTHO05D004972 1.1e-72 277.3 240 58.3
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 1.5e-72 276.9 249 59.0
Aa31LG9G5430 Aethionema arabicum HOM05D008086 ORTHO05D004972 3.7e-71 272.3 232 59.1
CARHR183270 Cardamine hirsuta HOM05D008086 ORTHO05D004972 8.2e-71 271.2 240 60.8
BraA02t08071Z Brassica rapa HOM05D008086 ORTHO05D004972 4.1e-70 268.9 234 59.0
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 1.7e-68 263.5 212 61.8
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 2.9e-68 262.7 235 56.2
THA.LOC104798375 Tarenaya hassleriana HOM05D008086 ORTHO05D004972 3.8e-68 262.3 232 56.0
C07p30540 Brassica napus HOM05D008086 ORTHO05D004972 6.5e-68 261.5 195 65.1
CARHR173740 Cardamine hirsuta HOM05D008086 ORTHO05D004972 3.0e-65 252.7 241 56.0
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 1.3e-63 247.3 244 52.9
BraA02t08035Z Brassica rapa HOM05D008086 ORTHO05D004972 2.8e-63 246.1 256 50.8
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 9.1e-62 241.1 219 56.6
A02p30570 Brassica napus HOM05D008086 ORTHO05D004972 9.1e-62 241.1 244 52.9
BcaC06g34304 Brassica carinata HOM05D008086 ORTHO05D004972 1.0e-60 237.7 234 53.4
BcaC03g16909 Brassica carinata HOM05D008086 ORTHO05D004972 8.5e-60 234.6 218 56.9
BolC2t10843H Brassica oleracea HOM05D008086 ORTHO05D004972 3.2e-59 232.6 204 58.3
C02p47660 Brassica napus HOM05D008086 ORTHO05D004972 2.7e-58 229.6 219 54.8
BcaB07g30809 Brassica carinata HOM05D008086 ORTHO05D004972 1.8e-57 226.9 228 52.6
BcaNung07056 Brassica carinata HOM05D008086 ORTHO05D004972 2.5e-51 206.5 200 54.0
C02p48110 Brassica napus HOM05D008086 ORTHO05D004972 5.5e-51 205.3 188 56.9
AT5G47590 Arabidopsis thaliana HOM05D008086 ORTHO05D004972 3.0e-49 199.5 129 75.2
BcaC03g16910 Brassica carinata HOM05D008086 ORTHO05D004972 5.7e-48 195.3 235 46.4
A02p30540 Brassica napus HOM05D008086 ORTHO05D004972 7.5e-40 168.3 129 65.9
BraA02t08072Z Brassica rapa HOM05D008086 ORTHO05D004972 8.3e-39 164.9 129 64.3
A02p30190 Brassica napus HOM05D008086 ORTHO05D004972 2.7e-37 159.8 126 61.9
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 1.4e-33 147.5 244 37.3
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.5e-32 144.1 254 34.3
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 5.8e-32 142.1 254 36.2
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 7.5e-32 141.7 254 34.3
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 4.9e-31 139.0 256 35.5
C07p32950 Brassica napus HOM05D008086 ORTHO05D004972 1.4e-30 137.5 110 62.7
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 2.4e-30 136.7 255 34.9
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 7.0e-30 135.2 256 34.4
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 7.0e-30 135.2 256 34.4
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 9.2e-30 134.8 253 32.4
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 1.6e-29 134.0 254 33.5
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 1.6e-29 134.0 254 33.5
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.7e-29 133.3 245 32.2
Thecc.03G253000 Theobroma cacao HOM05D008086 ORTHO05D004972 6.0e-29 132.1 115 58.3
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 7.8e-29 131.7 244 31.6
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 7.8e-29 131.7 245 33.5
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-28 131.0 244 32.4
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 1.7e-28 130.6 222 37.8
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 1.7e-28 130.6 222 37.8
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.9e-27 127.1 267 31.8
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.9e-27 127.1 254 33.1
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 3.3e-27 126.3 233 33.5
C03p62430 Brassica napus HOM05D008086 ORTHO05D004972 5.6e-27 125.6 159 45.9
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 2.1e-26 123.6 249 33.7
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 1.4e-25 120.9 233 35.6
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 4.0e-25 119.4 233 30.9
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 4.0e-25 119.4 234 34.2
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 5.2e-25 119.0 231 32.9
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 5.8e-24 115.5 240 34.2
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 7.5e-24 115.2 254 31.9
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 7.5e-24 115.2 234 34.2
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 9.9e-24 114.8 271 31.0
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 1.3e-23 114.4 234 34.6
QL12p012461 Quercus lobata HOM05D008086 ORTHO05D004972 1.3e-23 114.4 212 34.0
BolC2t10844H Brassica oleracea HOM05D008086 ORTHO05D041227 6.4e-23 112.1 147 46.3
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 6.4e-23 112.1 278 29.1
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 8.3e-23 111.7 241 31.5
QL12p012450 Quercus lobata HOM05D007337 ORTHO05D004972 1.1e-22 111.3 200 35.0
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.4e-22 110.9 271 28.4
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 2.4e-22 110.2 249 30.5
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 3.2e-22 109.8 265 30.9
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 4.1e-22 109.4 267 30.0
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 4.1e-22 109.4 249 30.5
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 5.4e-22 109.0 275 29.5
BolC3t18501H Brassica oleracea HOM05D008086 ORTHO05D004972 6.0e-21 105.5 148 42.6
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.0e-20 104.8 240 31.2
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 1.3e-20 104.4 267 28.1
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 8.6e-20 101.7 262 30.9
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-19 101.3 206 33.5
C07p48020 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-19 101.3 127 35.4
BolC7t45326H Brassica oleracea HOM05D007337 ORTHO05D004972 1.1e-19 101.3 111 37.8
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 2.5e-19 100.1 273 28.6
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 2.5e-19 100.1 273 28.6
A03p49970 Brassica napus HOM05D007337 ORTHO05D004972 5.6e-19 99.0 249 32.1
BraA03t14089Z Brassica rapa HOM05D007337 ORTHO05D004972 5.6e-19 99.0 249 32.1
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 7.3e-19 98.6 273 28.6
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 9.5e-19 98.2 234 28.6
BolC7t45324H Brassica oleracea HOM05D007337 ORTHO05D004972 9.5e-19 98.2 251 31.5
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-18 97.8 195 35.9
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 1.6e-18 97.4 236 29.7
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 1.6e-18 97.4 236 29.7
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.1e-18 97.1 276 26.1
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 2.8e-18 96.7 229 31.4
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.6e-18 96.3 275 26.9
BcaC06g33497 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-17 94.7 229 30.1
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-17 94.7 234 30.3
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.4e-17 94.4 280 29.6
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 1.8e-17 94.0 229 31.4
AT4G16540 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 4.0e-17 92.8 114 37.7
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 5.2e-17 92.4 235 28.5
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 5.2e-17 92.4 235 28.1
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 6.8e-17 92.0 237 27.8
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 1.5e-16 90.9 235 28.1
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.4e-16 89.7 232 29.3
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 3.4e-16 89.7 183 32.2
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 3.4e-16 89.7 237 27.8
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 4.4e-16 89.4 241 29.5
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 4.4e-16 89.4 241 29.5
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 4.4e-16 89.4 183 32.2
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 9.9e-16 88.2 247 31.6
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.2e-15 87.0 228 25.9
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 2.9e-15 86.7 209 31.1
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 2.9e-15 86.7 227 29.1
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 2.9e-15 86.7 227 29.1
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 3.8e-15 86.3 108 40.7
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-14 84.7 242 30.6
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 3.2e-14 83.2 228 31.6
CARHR222970 Cardamine hirsuta HOM05D007337 ORTHO05D004972 7.1e-14 82.0 108 39.8
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 2.7e-13 80.1 248 28.2
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 4.6e-13 79.3 228 28.9
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 6.0e-13 79.0 228 28.1
C02p48120 Brassica napus HOM05D008086 ORTHO05D041227 2.3e-12 77.0 82 48.8
CAN.G1218.23 Capsicum annuum HOM05D008086 ORTHO05D010560 8.7e-12 75.1 116 35.3
AT4G16555 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.1e-11 74.7 127 33.9
CARHR223010 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.1e-11 74.7 72 44.4
Sopen08g027190 Solanum pennellii HOM05D001099 ORTHO05D010560 1.9e-11 73.9 114 36.0
BolC4t21835H Brassica oleracea HOM05D007337 ORTHO05D004972 3.3e-11 73.2 252 27.0
BolC4t21837H Brassica oleracea HOM05D007337 ORTHO05D004972 3.3e-11 73.2 252 27.0
BolC4t21838H Brassica oleracea HOM05D007337 ORTHO05D004972 3.3e-11 73.2 252 27.0
PGSC0003DMG400004806 Solanum tuberosum HOM05D008086 ORTHO05D010560 4.3e-11 72.8 114 35.1
Solyc08g078720.3 Solanum lycopersicum HOM05D008086 ORTHO05D010560 9.6e-11 71.6 114 35.1
Peaxi162Scf00002g00191 Petunia axillaris HOM05D001099 ORTHO05D000958 1.2e-10 71.2 193 26.4
Peaxi162Scf00002g01721 Petunia axillaris HOM05D008086 ORTHO05D010560 2.8e-10 70.1 100 37.0
Nitab4.5_0008481g0040 Nicotiana tabacum HOM05D008086 ORTHO05D010560 6.9e-09 65.5 96 36.5
Nitab4.5_0000312g0140 Nicotiana tabacum HOM05D001099 ORTHO05D010560 9.0e-09 65.1 96 35.4
Cc08_g12570 Coffea canephora HOM05D001099 ORTHO05D010560 1.3e-07 61.2 118 35.6
BcaC09g50367 Brassica carinata HOM05D007337 ORTHO05D004972 2.2e-07 60.5 167 29.3
Rhsim09G0039000 Rhododendron simsii HOM05D007337 ORTHO05D000958 2.2e-07 60.5 100 35.0
Dinv39135 Davidia involucrata HOM05D009070 ORTHO05D010560 3.8e-07 59.7 121 30.6
Dinv21628 Davidia involucrata HOM05D001099 ORTHO05D010560 2.4e-06 57.0 106 29.2
BolC7t45323H Brassica oleracea HOM05D007337 ORTHO05D004972 5.4e-06 55.8 91 35.2
C07p47990 Brassica napus HOM05D007337 ORTHO05D004972 9.3e-06 55.1 63 46.0


User provided reference genes

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