Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p44330 Brassica napus HOM05D001134 ORTHO05D041980 3.9e-88 328.2 175 100.0
BraA06t27307Z Brassica rapa HOM05D001134 ORTHO05D041980 3.9e-88 328.2 175 100.0
BraA06t26862Z Brassica rapa HOM05D001134 ORTHO05D001035 5.1e-19 98.6 118 55.1
Carub.0014s0004 Capsella rubella HOM05D001134 ORTHO05D001035 1.2e-17 94.0 138 49.3
A06p39470 Brassica napus HOM05D001134 ORTHO05D001035 2.8e-17 92.8 118 53.4
CARHR284320 Cardamine hirsuta HOM05D001134 ORTHO05D001035 2.8e-17 92.8 142 47.9
AL8G19890 Arabidopsis lyrata HOM05D001134 ORTHO05D001035 1.1e-16 90.9 160 43.8
C07p38800 Brassica napus HOM05D001134 ORTHO05D001035 1.1e-16 90.9 118 52.5
Thhalv10004241m.g Eutrema salsugineum HOM05D001134 ORTHO05D001035 1.5e-15 87.0 160 42.5
Sp2g18400 Schrenkiella parvula HOM05D001134 ORTHO05D001035 3.4e-15 85.9 129 48.1
AT5G47900 Arabidopsis thaliana HOM05D001134 ORTHO05D001035 4.4e-15 85.5 160 41.9
BolC7t44399H Brassica oleracea HOM05D001134 ORTHO05D001035 3.5e-12 75.9 118 48.3
Aa31LG3G14190 Aethionema arabicum HOM05D001134 ORTHO05D001035 4.6e-12 75.5 129 44.2
THA.LOC104801576 Tarenaya hassleriana HOM05D001134 ORTHO05D001035 1.1e-10 70.9 129 45.0
TWI18G0743 Tripterygium wilfordii HOM05D001134 ORTHO05D001035 1.5e-10 70.5 127 40.2
CANSAT01G2962 Cannabis sativa HOM05D001134 ORTHO05D001035 2.5e-10 69.7 118 39.8
Duzib147G1286 Durio zibethinus HOM05D001134 ORTHO05D001035 3.3e-10 69.3 118 43.2
MBI07_g11068_MAGBIO Magnolia biondii HOM05D001134 ORTHO05D001035 3.3e-10 69.3 116 45.7
ATR0582G104 Amborella trichopoda HOM05D001134 ORTHO05D001035 9.6e-10 67.8 127 37.8
Nn4g22046 Nelumbo nucifera HOM05D001134 ORTHO05D001035 9.6e-10 67.8 127 40.9
Dinv11747 Davidia involucrata HOM05D001134 ORTHO05D001035 1.6e-09 67.0 158 36.1
Sed0011371 Sechium edule HOM05D001134 ORTHO05D001035 1.6e-09 67.0 137 37.2
Thecc.01G144900 Theobroma cacao HOM05D001134 ORTHO05D001035 1.6e-09 67.0 116 40.5
GSVIVG01001132001 Vitis vinifera HOM05D001134 ORTHO05D001035 1.6e-09 67.0 116 39.7
TWI36G1580 Tripterygium wilfordii HOM05D001134 ORTHO05D001035 2.8e-09 66.2 127 37.0
MELO3C026757.2 Cucumis melo HOM05D001134 ORTHO05D001035 3.6e-09 65.9 135 37.8
QL03p047973 Quercus lobata HOM05D001134 ORTHO05D001035 3.6e-09 65.9 116 38.8
VMungo1383G1865 Vigna mungo HOM05D001134 ORTHO05D001035 4.7e-09 65.5 118 37.3
CiPaw.06G112000 Carya illinoinensis HOM05D001134 ORTHO05D001035 8.1e-09 64.7 116 40.5
CsaV3_3G043450 Cucumis sativus L. HOM05D001134 ORTHO05D001035 8.1e-09 64.7 135 37.8
PSO210G4721 Papaver somniferum HOM05D001134 ORTHO05D001035 8.1e-09 64.7 126 38.1
ClCG10G013140 Citrullus lanatus HOM05D001134 ORTHO05D001035 1.1e-08 64.3 135 37.8
Aqoxy5G02920 Aquilegia oxysepala HOM05D001134 ORTHO05D001035 1.4e-08 63.9 125 38.4
CiPaw.05G097100 Carya illinoinensis HOM05D001134 ORTHO05D001035 1.4e-08 63.9 116 39.7
SGA_v2.0_scaffold258G45759 Striga asiatica HOM05D001134 ORTHO05D001035 1.4e-08 63.9 119 42.0
Sed0011869 Sechium edule HOM05D001134 ORTHO05D001035 1.8e-08 63.5 116 37.9
Gohir.D04G042600 Gossypium hirsutum HOM05D001134 ORTHO05D001035 2.4e-08 63.2 118 38.1
Gorai.012G048100 Gossypium raimondii HOM05D001134 ORTHO05D001035 2.4e-08 63.2 118 38.1
Nn3g21619 Nelumbo nucifera HOM05D001134 ORTHO05D001035 2.4e-08 63.2 126 37.3
SalBow2G2256 Salvia bowleyana HOM05D001134 ORTHO05D001035 2.4e-08 63.2 118 39.8
TAR622G0434 Trochodendron aralioides HOM05D001134 ORTHO05D001035 2.4e-08 63.2 127 42.5
Oeu011724.1 Olea europaea HOM05D001134 ORTHO05D001035 3.1e-08 62.8 118 39.0
CDE02G2567 Ceratophyllum demersum HOM05D001134 ORTHO05D001035 4.0e-08 62.4 129 36.4
Os02g0526000 Oryza sativa ssp. japonica HOM05D001134 ORTHO05D001035 4.0e-08 62.4 127 38.6
Potri.001G071500 Populus trichocarpa HOM05D001134 ORTHO05D001035 4.0e-08 62.4 135 39.3
Zm00001eb242410 Zea mays HOM05D001134 ORTHO05D001035 4.0e-08 62.4 127 38.6
FAN17G2172 Fragaria x ananassa HOM05D001134 ORTHO05D001035 5.2e-08 62.0 116 37.1
RcHm_v2.0_Chr4g0428311 Rosa chinensis HOM05D001134 ORTHO05D001035 5.2e-08 62.0 116 37.9
Dinv10061 Davidia involucrata HOM05D001134 ORTHO05D001035 6.8e-08 61.6 136 36.8
MBI18_g24954_MAGBIO Magnolia biondii HOM05D001134 ORTHO05D001035 6.8e-08 61.6 139 36.7
COL.COLO4_12146 Corchorus olitorius HOM05D001134 ORTHO05D001035 8.9e-08 61.2 116 37.9
Gohir.A05G372900 Gossypium hirsutum HOM05D001134 ORTHO05D001035 8.9e-08 61.2 116 37.9
Oeu010271.1 Olea europaea HOM05D001134 ORTHO05D001035 1.2e-07 60.8 118 37.3
Ciclev10028441m.g Citrus clementina HOM05D001134 ORTHO05D001035 1.5e-07 60.5 118 34.7
Hma1.2p1_0738F.1_g211060 Hydrangea macrophylla HOM05D001134 ORTHO05D001035 1.5e-07 60.5 160 34.4
Phvul.008G004100 Phaseolus vulgaris HOM05D001134 ORTHO05D001035 1.5e-07 60.5 116 36.2
CSS0031747 Camellia sinensis var. sinensis HOM05D001134 ORTHO05D001035 2.0e-07 60.1 136 35.3
CDE09G0825 Ceratophyllum demersum HOM05D001134 ORTHO05D001035 2.0e-07 60.1 129 35.7
TAR374G1387 Trochodendron aralioides HOM05D001134 ORTHO05D001035 2.0e-07 60.1 163 35.6
Migut.K01150 Erythranthe guttata HOM05D001134 ORTHO05D001035 2.6e-07 59.7 118 34.7
FvH4_4g22060 Fragaria vesca HOM05D001134 ORTHO05D001035 2.6e-07 59.7 116 36.2
FAN12G3272 Fragaria x ananassa HOM05D001134 ORTHO05D001035 2.6e-07 59.7 116 36.2
CAN.G624.15 Capsicum annuum HOM05D001134 ORTHO05D001035 3.4e-07 59.3 114 36.8
Manes.08G098800 Manihot esculenta HOM05D001134 ORTHO05D001035 3.4e-07 59.3 118 41.5
Os11g0543500 Oryza sativa ssp. japonica HOM05D001134 ORTHO05D001035 3.4e-07 59.3 130 33.1
Migut.H01172 Erythranthe guttata HOM05D001134 ORTHO05D001035 4.4e-07 58.9 116 37.1
Hma1.2p1_0212F.1_g090140 Hydrangea macrophylla HOM05D001134 ORTHO05D001035 4.4e-07 58.9 125 38.4
HanXRQChr15g0464221 Helianthus annuus HOM05D001134 ORTHO05D001035 5.8e-07 58.5 136 32.4
PGSC0003DMG400041580 Solanum tuberosum HOM05D001134 ORTHO05D001035 5.8e-07 58.5 117 38.5
Cpa.g.sc38.18 Carica papaya HOM05D001134 ORTHO05D001035 7.6e-07 58.2 123 37.4
CiPaw.07G114600 Carya illinoinensis HOM05D001134 ORTHO05D001035 7.6e-07 58.2 137 35.0
Potri.014G123800 Populus trichocarpa HOM05D001134 ORTHO05D001035 7.6e-07 58.2 125 38.4
Sabra01G0050300 Salix brachista HOM05D001134 ORTHO05D001035 7.6e-07 58.2 135 38.5
FAN07G2984 Fragaria x ananassa HOM05D001134 ORTHO05D001035 9.9e-07 57.8 118 36.4
Glyma.08G363600 Glycine max HOM05D001134 ORTHO05D001035 9.9e-07 57.8 118 34.7
MD16G1130600 Malus domestica HOM05D001134 ORTHO05D001035 9.9e-07 57.8 137 37.2
PSO017G6079 Papaver somniferum HOM05D001134 ORTHO05D001035 9.9e-07 57.8 125 36.0
CAN.G1041.33 Capsicum annuum HOM05D001134 ORTHO05D001035 1.3e-06 57.4 117 35.9
Eucgr.J01676 Eucalyptus grandis HOM05D001134 ORTHO05D001035 1.3e-06 57.4 127 35.4
Lalb_Chr06g0164731 Lupinus albus HOM05D001134 ORTHO05D001035 1.3e-06 57.4 116 37.1
Nitab4.5_0005286g0110 Nicotiana tabacum HOM05D001134 ORTHO05D001035 1.3e-06 57.4 118 38.1
PSO478G4065 Papaver somniferum HOM05D001134 ORTHO05D001035 1.3e-06 57.4 125 34.4
Peaxi162Scf01167g00122 Petunia axillaris HOM05D001134 ORTHO05D001035 1.3e-06 57.4 116 39.7
Prupe.1G210600 Prunus persica HOM05D001134 ORTHO05D001035 1.3e-06 57.4 135 39.3
Glyma.18G298500 Glycine max HOM05D001134 ORTHO05D001035 1.7e-06 57.0 118 33.1
PSO761G0655 Papaver somniferum HOM05D001134 ORTHO05D001035 1.7e-06 57.0 125 35.2
HPP92_009746 Vanilla planifolia HOM05D001134 ORTHO05D001035 1.7e-06 57.0 125 37.6
CDE09G0188 Ceratophyllum demersum HOM05D001134 ORTHO05D001035 2.2e-06 56.6 123 35.8
Solyc10g055620.2 Solanum lycopersicum HOM05D001134 ORTHO05D001035 2.2e-06 56.6 154 35.1
Sopen10g025410 Solanum pennellii HOM05D001134 ORTHO05D001035 2.2e-06 56.6 154 35.1
TAR362G1229 Trochodendron aralioides HOM05D001134 ORTHO05D001035 2.2e-06 56.6 137 34.3
unitig_749.g13335 Utricularia gibba HOM05D001134 ORTHO05D001035 2.2e-06 56.6 117 35.9
HPP92_009767 Vanilla planifolia HOM05D001134 ORTHO05D001035 2.2e-06 56.6 125 37.6
Migut.D00105 Erythranthe guttata HOM05D001134 ORTHO05D001035 2.9e-06 56.2 136 33.8
Cfa009480 Carpinus fangiana HOM05D001134 ORTHO05D001035 3.8e-06 55.8 116 37.9
Nitab4.5_0002113g0030 Nicotiana tabacum HOM05D001134 ORTHO05D001035 3.8e-06 55.8 116 36.2
PGSC0003DMG400002183 Solanum tuberosum HOM05D001134 ORTHO05D001035 3.8e-06 55.8 114 36.0
BcaC06g30837 Brassica carinata HOM05D001134 ORTHO05D001035 4.9e-06 55.5 60 55.0
Cfa003845 Carpinus fangiana HOM05D001134 ORTHO05D001035 4.9e-06 55.5 120 35.8
Nitab4.5_0005236g0050 Nicotiana tabacum HOM05D001134 ORTHO05D001035 4.9e-06 55.5 154 33.8
Nitab4.5_0007602g0020 Nicotiana tabacum HOM05D001134 ORTHO05D001035 4.9e-06 55.5 118 34.7
Oeu006464.1 Olea europaea HOM05D001134 ORTHO05D001035 4.9e-06 55.5 135 34.1
Migut.B00072 Erythranthe guttata HOM05D001134 ORTHO05D001035 6.4e-06 55.1 115 33.0
Eucgr.K03521 Eucalyptus grandis HOM05D001134 ORTHO05D001035 6.4e-06 55.1 112 39.3
Gorai.008G141800 Gossypium raimondii HOM05D001134 ORTHO05D001035 6.4e-06 55.1 139 36.7
Os04g0404900 Oryza sativa ssp. japonica HOM05D001134 ORTHO05D001035 6.4e-06 55.1 125 38.4
Potri.003G159200 Populus trichocarpa HOM05D001134 ORTHO05D001035 6.4e-06 55.1 116 35.3
PGR042G2942 Punica granatum HOM05D001134 ORTHO05D001035 6.4e-06 55.1 117 31.6
Sc08g0002860 Simmondsia chinensis HOM05D001134 ORTHO05D001035 6.4e-06 55.1 115 36.5
Solyc06g084590.4 Solanum lycopersicum HOM05D001134 ORTHO05D001035 6.4e-06 55.1 136 33.1
Aqoxy7G03771 Aquilegia oxysepala HOM05D001134 ORTHO05D001035 8.4e-06 54.7 126 33.3
MBI11_g22239_MAGBIO Magnolia biondii HOM05D001134 ORTHO05D001035 8.4e-06 54.7 116 37.1
PSO832G0123 Papaver somniferum HOM05D001134 ORTHO05D001035 8.4e-06 54.7 116 33.6
TPR.G9696 Trifolium pratense HOM05D001134 ORTHO05D001035 8.4e-06 54.7 116 31.9


User provided reference genes

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