Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p44090 Brassica napus HOM05D003797 ORTHO05D004370 1.0e-88 330.1 171 100.0
BraA06t27283Z Brassica rapa HOM05D003797 ORTHO05D004370 8.5e-88 327.0 171 99.4
Thhalv10005591m.g Eutrema salsugineum HOM05D003797 ORTHO05D004370 5.4e-82 307.8 169 89.9
Sp2g13230 Schrenkiella parvula HOM05D003797 ORTHO05D004370 2.3e-80 302.4 169 88.2
A02p32320 Brassica napus HOM05D003797 ORTHO05D004370 7.2e-79 297.4 169 87.0
C02p49920 Brassica napus HOM05D003797 ORTHO05D004370 7.2e-79 297.4 169 87.0
BolC2t11071H Brassica oleracea HOM05D003797 ORTHO05D004370 7.2e-79 297.4 169 87.0
BraA02t08249Z Brassica rapa HOM05D003797 ORTHO05D004370 7.2e-79 297.4 169 87.0
BcaC06g31278 Brassica carinata HOM05D003797 ORTHO05D004370 9.5e-79 297.0 199 80.4
BcaC03g17074 Brassica carinata HOM05D003797 ORTHO05D004370 1.2e-78 296.6 169 87.0
AL5G10900 Arabidopsis lyrata HOM05D003797 ORTHO05D004370 6.1e-78 294.3 169 86.4
AT2G01770 Arabidopsis thaliana HOM05D003797 ORTHO05D004370 1.0e-77 293.5 169 86.4
BcaB05g24664 Brassica carinata HOM05D003797 ORTHO05D004370 1.2e-76 290.0 167 92.2
BcaB07g30374 Brassica carinata HOM05D003797 ORTHO05D004370 1.5e-76 289.7 172 84.9
CARHR144350 Cardamine hirsuta HOM05D003797 ORTHO05D004370 2.6e-76 288.9 169 85.2
Aa31LG2G8120 Aethionema arabicum HOM05D003797 ORTHO05D004370 2.8e-75 285.4 171 83.0
Carub.0005s0073 Capsella rubella HOM05D003797 ORTHO05D004370 8.3e-75 283.9 169 83.4
THA.LOC104823632 Tarenaya hassleriana HOM05D003797 ORTHO05D004370 1.1e-71 273.5 169 78.1
Sopen04g003210 Solanum pennellii HOM05D003797 ORTHO05D004370 4.3e-71 271.6 169 78.7
COL.COLO4_27615 Corchorus olitorius HOM05D003797 ORTHO05D004370 9.5e-71 270.4 168 77.4
Nitab4.5_0003619g0020 Nicotiana tabacum HOM05D003797 ORTHO05D004370 9.5e-71 270.4 169 78.1
PGSC0003DMG400029467 Solanum tuberosum HOM05D003797 ORTHO05D004370 9.5e-71 270.4 169 78.1
Actinidia36612 Actinidia chinensis HOM05D003797 ORTHO05D004370 4.7e-70 268.1 169 76.9
Solyc04g008060.3 Solanum lycopersicum HOM05D003797 ORTHO05D004370 4.7e-70 268.1 169 78.1
Nitab4.5_0002414g0010 Nicotiana tabacum HOM05D003797 ORTHO05D004370 6.1e-70 267.7 169 76.9
Thecc.02G308100 Theobroma cacao HOM05D003797 ORTHO05D004370 1.4e-69 266.5 168 76.2
AUR62012750 Chenopodium quinoa HOM05D003797 ORTHO05D004370 1.8e-69 266.2 169 74.6
AUR62021908 Chenopodium quinoa HOM05D003797 ORTHO05D004370 1.8e-69 266.2 169 74.6
Migut.E00497 Erythranthe guttata HOM05D003797 ORTHO05D004370 2.3e-69 265.8 169 76.9
HanXRQChr17g0565981 Helianthus annuus HOM05D003797 ORTHO05D004370 3.1e-69 265.4 169 76.9
SGA_v2.0_scaffold23G10159 Striga asiatica HOM05D003797 ORTHO05D004370 3.1e-69 265.4 169 76.3
SalBow2G0350 Salvia bowleyana HOM05D003797 ORTHO05D004370 4.0e-69 265.0 169 75.1
Duzib251G0134 Durio zibethinus HOM05D003797 ORTHO05D004370 5.2e-69 264.6 168 75.0
Dinv26370 Davidia involucrata HOM05D003797 ORTHO05D004370 6.8e-69 264.2 169 75.7
Potri.010G104200 Populus trichocarpa HOM05D003797 ORTHO05D004370 8.9e-69 263.8 168 75.0
Manes.15G136600 Manihot esculenta HOM05D003797 ORTHO05D004370 1.2e-68 263.5 168 75.0
Oeu006298.1 Olea europaea HOM05D003797 ORTHO05D004370 1.5e-68 263.1 169 76.9
Peaxi162Scf00337g00715 Petunia axillaris HOM05D003797 ORTHO05D004370 1.5e-68 263.1 164 79.3
Ciclev10016475m.g Citrus clementina HOM05D003797 ORTHO05D004370 2.0e-68 262.7 168 76.2
CAN.G74.19 Capsicum annuum HOM05D003797 ORTHO05D004370 2.6e-68 262.3 169 75.1
Gohir.A13G027600 Gossypium hirsutum HOM05D003797 ORTHO05D004370 2.6e-68 262.3 168 75.0
Phvul.002G322900 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 2.6e-68 262.3 166 75.9
TWI74G1086 Tripterygium wilfordii HOM05D003797 ORTHO05D004370 2.6e-68 262.3 169 74.0
Gorai.013G029700 Gossypium raimondii HOM05D003797 ORTHO05D004370 3.4e-68 261.9 168 75.0
Prupe.1G335200 Prunus persica HOM05D003797 ORTHO05D004370 4.4e-68 261.5 168 75.6
MSTRG.2118 Avicennia marina HOM05D003797 ORTHO05D004370 5.8e-68 261.2 169 74.0
CANSAT78G0734 Cannabis sativa HOM05D003797 ORTHO05D004370 7.5e-68 260.8 169 74.0
Gohir.D13G026400 Gossypium hirsutum HOM05D003797 ORTHO05D004370 9.8e-68 260.4 168 73.8
Hma1.2p1_0234F.1_g098420 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 1.7e-67 259.6 169 75.1
arahy.Tifrunner.gnm1.ann1.Q36DTI Arachis hypogaea HOM05D000005 ORTHO05D004370 2.2e-67 259.2 166 75.9
arahy.Tifrunner.gnm1.ann1.2L3ISV Arachis hypogaea HOM05D003797 ORTHO05D004370 2.9e-67 258.8 166 75.3
Cfa015046 Carpinus fangiana HOM05D003797 ORTHO05D004370 2.9e-67 258.8 168 74.4
CiPaw.06G054700 Carya illinoinensis HOM05D003797 ORTHO05D004370 2.9e-67 258.8 168 75.0
Ah.09g234580 Amaranthus hybridus HOM05D003797 ORTHO05D004370 3.7e-67 258.5 169 74.0
Ah.14g087870 Amaranthus hybridus HOM05D003797 ORTHO05D004370 3.7e-67 258.5 169 73.4
Duzib248G0263 Durio zibethinus HOM05D003797 ORTHO05D004370 3.7e-67 258.5 168 75.6
Glyma.08G047500 Glycine max HOM05D003797 ORTHO05D004370 3.7e-67 258.5 166 74.7
ECA234G4680 Erigeron canadensis HOM05D003797 ORTHO05D004370 6.4e-67 257.7 169 74.6
Lsat_1_v5_gn_4_23500 Lactuca sativa HOM05D003797 ORTHO05D004370 6.4e-67 257.7 169 75.7
PGR102G0637 Punica granatum HOM05D003797 ORTHO05D004370 6.4e-67 257.7 169 74.0
CANSAT78G1947 Cannabis sativa HOM05D003797 ORTHO05D004370 8.3e-67 257.3 169 72.2
Glyma.05G240600 Glycine max HOM05D003797 ORTHO05D004370 8.3e-67 257.3 166 75.9
HanXRQChr16g0527241 Helianthus annuus HOM05D003797 ORTHO05D004370 8.3e-67 257.3 169 75.7
Atru.chr11.843 Acer truncatum HOM05D003797 ORTHO05D004370 1.1e-66 256.9 171 72.5
Atru.chr11.849 Acer truncatum HOM05D003797 ORTHO05D004370 1.1e-66 256.9 171 72.5
Ca_17254_v3 Cicer arietinum L. HOM05D003797 ORTHO05D004370 1.1e-66 256.9 166 74.7
ClCG07G005420 Citrullus lanatus HOM05D003797 ORTHO05D004370 1.1e-66 256.9 169 72.2
Dinv06119 Davidia involucrata HOM05D003797 ORTHO05D004370 1.1e-66 256.9 169 74.0
QL03p037712 Quercus lobata HOM05D003797 ORTHO05D004370 1.1e-66 256.9 168 75.0
RcHm_v2.0_Chr4g0442611 Rosa chinensis HOM05D003797 ORTHO05D004370 1.4e-66 256.5 168 73.2
Cc11_g06660 Coffea canephora HOM05D003797 ORTHO05D004370 1.9e-66 256.1 169 75.1
MD16G1016600 Malus domestica HOM05D003797 ORTHO05D004370 1.9e-66 256.1 168 72.6
DCAR_023568 Daucus carota HOM05D003797 ORTHO05D004370 2.4e-66 255.8 169 72.2
LjContig00081g0026703 Lotus japonicus HOM05D003797 ORTHO05D004370 2.4e-66 255.8 166 75.3
Nn3g18415 Nelumbo nucifera HOM05D003797 ORTHO05D004370 2.4e-66 255.8 169 73.4
FAN07G0297 Fragaria x ananassa HOM05D003797 ORTHO05D004370 3.2e-66 255.4 168 72.6
Rhsim09G0088200 Rhododendron simsii HOM05D003797 ORTHO05D004370 3.2e-66 255.4 169 72.8
VMungo0251G2898 Vigna mungo HOM05D003797 ORTHO05D004370 3.2e-66 255.4 166 74.7
FvH4_4g33340 Fragaria vesca HOM05D003797 ORTHO05D004370 4.1e-66 255.0 168 72.6
FAN22G2109 Fragaria x ananassa HOM05D003797 ORTHO05D004370 4.1e-66 255.0 168 72.6
CsaV3_5G014530 Cucumis sativus L. HOM05D003797 ORTHO05D004370 5.4e-66 254.6 169 71.6
CSS0047498 Camellia sinensis var. sinensis HOM05D003797 ORTHO05D004370 7.0e-66 254.2 169 72.2
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 7.0e-66 254.2 169 71.6
Dinv03968 Davidia involucrata HOM05D003797 ORTHO05D004370 7.0e-66 254.2 169 74.0
GSVIVG01011628001 Vitis vinifera HOM05D003797 ORTHO05D004370 9.2e-66 253.8 169 71.0
MD16G1016500 Malus domestica HOM05D003797 ORTHO05D004370 1.2e-65 253.4 169 72.8
Cpa.g.sc2.168 Carica papaya HOM05D003797 ORTHO05D004370 2.0e-65 252.7 168 72.6
Prupe.1G335300 Prunus persica HOM05D003797 ORTHO05D004370 2.0e-65 252.7 169 71.0
FAN17G2298 Fragaria x ananassa HOM05D003797 ORTHO05D004370 2.7e-65 252.3 168 71.4
Aqoxy3G04068 Aquilegia oxysepala HOM05D003797 ORTHO05D004370 3.5e-65 251.9 169 72.8
HanXRQChr12g0383081 Helianthus annuus HOM05D003797 ORTHO05D004370 3.5e-65 251.9 169 74.6
Sed0007838 Sechium edule HOM05D003797 ORTHO05D004370 3.5e-65 251.9 169 71.0
PSO732G0427 Papaver somniferum HOM05D003797 ORTHO05D004370 6.0e-65 251.1 169 70.4
TPR.G19268 Trifolium pratense HOM05D003797 ORTHO05D004370 6.0e-65 251.1 166 74.7
unitig_22.g5605 Utricularia gibba HOM05D003797 ORTHO05D004370 6.0e-65 251.1 169 70.4
Medtr8g105810 Medicago truncatula HOM05D003797 ORTHO05D004370 7.8e-65 250.8 166 75.3
Eucgr.B02690 Eucalyptus grandis HOM05D003797 ORTHO05D004370 1.3e-64 250.0 169 72.2
Lj3A863T39 Lonicera japonica HOM05D003797 ORTHO05D004370 1.3e-64 250.0 186 67.7
Potri.010G104100 Populus trichocarpa HOM05D003797 ORTHO05D004370 1.3e-64 250.0 167 71.3
PSO675G2134 Papaver somniferum HOM05D003797 ORTHO05D004370 1.7e-64 249.6 169 69.8
Medtr8g105790 Medicago truncatula HOM05D003797 ORTHO05D004370 2.3e-64 249.2 166 74.1
FAN17G0483 Fragaria x ananassa HOM05D003797 ORTHO05D004370 3.0e-64 248.8 169 71.0
unitig_8.g4013 Utricularia gibba HOM05D003797 ORTHO05D004370 3.0e-64 248.8 169 70.4
Psat7g007520 Pisum sativum HOM05D003797 ORTHO05D004370 5.0e-64 248.1 166 72.3
Duzib268G1244 Durio zibethinus HOM05D003797 ORTHO05D004370 1.1e-63 246.9 168 72.0
RcHm_v2.0_Chr4g0442571 Rosa chinensis HOM05D003797 ORTHO05D004370 1.1e-63 246.9 169 70.4
FAN12G2011 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.5e-63 246.5 169 70.4
FAN22G0305 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.5e-63 246.5 169 70.4
QL03p037918 Quercus lobata HOM05D003797 ORTHO05D004370 1.5e-63 246.5 169 71.6
Sabra10G0076600 Salix brachista HOM05D003797 ORTHO05D004370 1.5e-63 246.5 168 71.4
MBI19_g09381_MAGBIO Magnolia biondii HOM05D003797 ORTHO05D004370 1.9e-63 246.1 169 71.6
Lalb_Chr05g0222091 Lupinus albus HOM05D003797 ORTHO05D004370 2.5e-63 245.7 166 71.1
MD13G1018700 Malus domestica HOM05D003797 ORTHO05D004370 2.5e-63 245.7 168 71.4
PGR142G2609 Punica granatum HOM05D003797 ORTHO05D004370 2.5e-63 245.7 169 71.6
Eucgr.B02691 Eucalyptus grandis HOM05D003797 ORTHO05D004370 3.3e-63 245.4 167 70.7
FAN12G0353 Fragaria x ananassa HOM05D003797 ORTHO05D004370 3.3e-63 245.4 182 67.0
RcHm_v2.0_Chr4g0442581 Rosa chinensis HOM05D003797 ORTHO05D004370 4.3e-63 245.0 169 70.4
TAR629G0971 Trochodendron aralioides HOM05D003797 ORTHO05D004370 4.3e-63 245.0 169 71.6
Atru.chr11.837 Acer truncatum HOM05D003797 ORTHO05D004370 5.6e-63 244.6 167 70.7
Nn3g18418 Nelumbo nucifera HOM05D003797 ORTHO05D004370 7.3e-63 244.2 169 71.0
FAN07G2428 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.2e-62 243.4 169 69.8
Sed0023787 Sechium edule HOM05D003797 ORTHO05D004370 1.2e-62 243.4 166 69.9
Eucgr.G02084 Eucalyptus grandis HOM05D003797 ORTHO05D004370 1.6e-62 243.0 167 71.9
Dinv00922 Davidia involucrata HOM05D003797 ORTHO05D004370 2.1e-62 242.7 168 73.2
Manes.17G085600 Manihot esculenta HOM05D003797 ORTHO05D004370 2.8e-62 242.3 171 68.4
Os04g0463400 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 4.7e-62 241.5 169 69.2
ATR0118G024 Amborella trichopoda HOM05D003797 ORTHO05D004370 1.1e-61 240.4 169 68.6
CsaV3_5G027930 Cucumis sativus L. HOM05D003797 ORTHO05D004370 1.1e-61 240.4 166 69.9
CsaV3_5G027940 Cucumis sativus L. HOM05D003797 ORTHO05D004370 1.1e-61 240.4 169 66.9
unitig_27.g25168 Utricularia gibba HOM05D003797 ORTHO05D004370 1.1e-61 240.4 169 71.6
CiPaw.06G054800 Carya illinoinensis HOM05D003797 ORTHO05D004370 1.4e-61 240.0 169 69.2
MELO3C005260.2 Cucumis melo HOM05D003797 ORTHO05D004370 1.4e-61 240.0 166 69.9
PSO384G3089 Papaver somniferum HOM05D003797 ORTHO05D004370 2.3e-61 239.2 170 67.1
PSO675G5697 Papaver somniferum HOM05D003797 ORTHO05D004370 3.1e-61 238.8 169 67.5
Os09g0396900 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 4.0e-61 238.4 169 69.2
HanXRQChr09g0251961 Helianthus annuus HOM05D003797 ORTHO05D004370 5.2e-61 238.0 164 74.4
Nn3g18417 Nelumbo nucifera HOM05D003797 ORTHO05D004370 1.2e-60 236.9 168 67.9
MELO3C005259.2 Cucumis melo HOM05D003797 ORTHO05D004370 2.0e-60 236.1 164 67.7
PSO339G4314 Papaver somniferum HOM05D003797 ORTHO05D004370 5.8e-60 234.6 170 64.7
PSO732G0533 Papaver somniferum HOM05D003797 ORTHO05D004370 5.8e-60 234.6 169 65.7
SEGI_33821 Sequoiadendron giganteum HOM05D003797 ORTHO05D004370 9.8e-60 233.8 169 66.9
Ciclev10017583m.g Citrus clementina HOM05D003797 ORTHO05D004370 3.7e-59 231.9 167 66.5
CDE05G1216 Ceratophyllum demersum HOM05D003797 ORTHO05D004370 1.1e-58 230.3 169 67.5
SHI04334 Sapria himalayana HOM05D003797 ORTHO05D004370 2.4e-58 229.2 179 63.7
CDE05G1112 Ceratophyllum demersum HOM05D003797 ORTHO05D004370 4.1e-58 228.4 169 65.7
Mapoly0116s0023 Marchantia polymorpha HOM05D003797 ORTHO05D004370 9.2e-58 227.3 168 67.9
Pp3c2_34540 Physcomitrium patens HOM05D003797 ORTHO05D004370 9.2e-58 227.3 168 67.3
Zm00001eb424350 Zea mays HOM05D003797 ORTHO05D004370 3.5e-57 225.3 164 66.5
Zm00001eb312010 Zea mays HOM05D003797 ORTHO05D004370 4.6e-57 224.9 169 63.3
GSVIVG01011629001 Vitis vinifera HOM05D003797 ORTHO05D004370 3.9e-56 221.9 139 74.8
HPP92_023443 Vanilla planifolia HOM05D003797 ORTHO05D004370 1.1e-55 220.3 169 63.3
ClCG01G006640 Citrullus lanatus HOM05D003797 ORTHO05D004370 1.1e-53 213.8 169 62.7
SMO169G0175 Selaginella moellendorffii HOM05D003797 ORTHO05D004370 1.1e-53 213.8 168 65.5
AagrBONN_evm.TU.Sc2ySwM_228.2367 Anthoceros agrestis HOM05D003797 ORTHO05D004370 4.0e-53 211.8 168 63.1
Phvul.002G322800 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 1.5e-52 209.9 166 66.3
Thecc.02G307900 Theobroma cacao HOM05D003797 ORTHO05D004370 5.8e-52 208.0 169 60.9
Duzib251G0065 Durio zibethinus HOM05D003797 ORTHO05D004370 1.3e-51 206.8 169 60.4
Haze_10851 Corylus avellana HOM05D003797 ORTHO05D004370 1.7e-51 206.5 135 74.1
EL10Ac8g20121 Beta vulgaris HOM05D003797 ORTHO05D004370 2.9e-51 205.7 169 62.7
COL.COLO4_27614 Corchorus olitorius HOM05D003797 ORTHO05D004370 8.3e-51 204.1 169 60.9
Hma1.2p1_1538F.1_g289560 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 6.0e-49 198.0 173 58.4
Eucgr.L02831 Eucalyptus grandis HOM05D003797 ORTHO05D004370 8.6e-48 194.1 134 70.9
Atru.chr11.846 Acer truncatum HOM05D003797 ORTHO05D004370 3.8e-43 178.7 171 56.7
Haze_10850 Corylus avellana HOM05D003797 ORTHO05D004370 7.1e-42 174.5 145 60.0
Sed0010431 Sechium edule HOM05D003797 ORTHO05D004370 7.1e-42 174.5 168 56.0
HPP92_023452 Vanilla planifolia HOM05D003797 ORTHO05D004370 6.6e-40 167.9 135 59.3
Hma1.2p1_0940F.1_g239510 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 1.5e-39 166.8 139 58.3
SEGI_29045 Sequoiadendron giganteum HOM05D003797 ORTHO05D004370 2.3e-32 142.9 103 66.0
VMungo0251G2644 Vigna mungo HOM05D003797 ORTHO05D004370 9.6e-31 137.5 98 69.4
Phvul.002G323700 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 2.9e-27 125.9 71 81.7
VMungo0251G0608 Vigna mungo HOM05D003797 ORTHO05D004370 2.9e-27 125.9 72 81.9
Hund23441 Selenicereus undatus HOM05D003797 ORTHO05D004370 3.8e-27 125.6 77 75.3
Zm00001eb099160 Zea mays HOM05D003797 ORTHO05D004370 1.9e-26 123.2 100 60.0
Nn4g24451 Nelumbo nucifera HOM05D003797 ORTHO05D004370 1.5e-15 87.0 70 60.0
unitig_52.g17091 Utricularia gibba HOM05D003797 ORTHO05D004370 4.1e-13 79.0 50 76.0
PRCOL_00004744 Prasinoderma coloniale HOM05D008009 ORTHO05D004370 2.6e-12 76.3 166 27.1
MCO11G458 Micromonas commoda HOM05D008009 ORTHO05D010177 1.7e-11 73.6 170 30.0
Thecc.06G045600 Theobroma cacao HOM05D003797 ORTHO05D004370 6.5e-11 71.6 53 60.4
PRCOL_00006926 Prasinoderma coloniale HOM05D008009 ORTHO05D010177 1.0e-08 64.3 141 29.8


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