Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p43920 Brassica napus HOM05D010619 ORTHO05D009830 1.2e-95 353.2 187 100.0
BraA06t27268Z Brassica rapa HOM05D010619 ORTHO05D009830 5.7e-69 264.6 143 90.2
BcaC06g34096 Brassica carinata HOM05D010619 ORTHO05D009830 1.1e-67 260.4 143 88.1
C07p32760 Brassica napus HOM05D010619 ORTHO05D009830 3.1e-67 258.8 143 87.4
BolC7t43793H Brassica oleracea HOM05D010619 ORTHO05D009830 3.1e-67 258.8 141 88.7
BcaC06g31262 Brassica carinata HOM05D010619 ORTHO05D009830 2.3e-54 216.1 143 76.2
C09p30500 Brassica napus HOM05D010619 ORTHO05D009830 1.3e-52 210.3 145 73.1
BcaC04g21548 Brassica carinata HOM05D010619 ORTHO05D009830 3.7e-52 208.8 145 72.4
BolC9t55912H Brassica oleracea HOM05D010619 ORTHO05D009830 6.3e-52 208.0 145 72.4
A09p23610 Brassica napus HOM05D010619 ORTHO05D009830 4.1e-51 205.3 145 72.4
BraA09t37965Z Brassica rapa HOM05D010619 ORTHO05D009830 4.1e-51 205.3 145 72.4
BcaB07g30724 Brassica carinata HOM05D010619 ORTHO05D009830 3.5e-50 202.2 144 70.8
Thhalv10005091m.g Eutrema salsugineum HOM05D010619 ORTHO05D009830 2.5e-48 196.1 144 69.4
Sp2g13350 Schrenkiella parvula HOM05D010619 ORTHO05D009830 2.7e-47 192.6 143 68.5
AL5G11040 Arabidopsis lyrata HOM05D010619 ORTHO05D009830 1.2e-45 187.2 145 68.3
CARHR144510 Cardamine hirsuta HOM05D010619 ORTHO05D009830 4.9e-44 181.8 145 66.2
AT2G01913 Arabidopsis thaliana HOM05D010619 ORTHO05D009830 2.7e-42 176.0 144 68.1
Carub.0005s0092 Capsella rubella HOM05D010619 ORTHO05D009830 5.6e-32 141.7 130 67.7
Aa31LG2G7990 Aethionema arabicum HOM05D010619 ORTHO05D009830 1.3e-20 104.0 151 45.0
THA.LOC104805100 Tarenaya hassleriana HOM05D010619 ORTHO05D009830 1.6e-10 70.5 165 37.6
Lsat_1_v5_gn_4_24181 Lactuca sativa HOM05D008187 ORTHO05D009830 5.6e-08 62.0 136 36.0
Manes.17G089700 Manihot esculenta HOM05D008187 ORTHO05D009830 4.7e-07 58.9 128 30.5
Ciclev10016789m.g Citrus clementina HOM05D008187 ORTHO05D009830 6.2e-07 58.5 94 36.2
CiPaw.05G158900 Carya illinoinensis HOM05D008187 ORTHO05D009830 1.1e-06 57.8 123 34.1
Atru.chr11.1001 Acer truncatum HOM05D008187 ORTHO05D009830 1.4e-06 57.4 92 40.2
Thecc.02G303500 Theobroma cacao HOM05D008187 ORTHO05D009830 3.1e-06 56.2 85 41.2
Manes.15G138900 Manihot esculenta HOM05D008187 ORTHO05D009830 4.0e-06 55.8 127 30.7
Psat7g085360 Pisum sativum HOM05D008187 ORTHO05D009830 4.0e-06 55.8 118 33.1
Phvul.002G184100 Phaseolus vulgaris HOM05D008187 ORTHO05D009830 5.2e-06 55.5 120 35.0
VMungo0251G0444 Vigna mungo HOM05D008187 ORTHO05D009830 8.9e-06 54.7 121 34.7


User provided reference genes

Program Settings