Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 1.7e-282 975.3 475 100.0
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 3.1e-281 971.1 475 99.6
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 1.2e-277 959.1 475 98.1
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 1.2e-277 959.1 475 98.1
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 3.4e-267 924.5 479 94.4
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 2.2e-266 921.8 475 94.3
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 2.2e-266 921.8 475 93.9
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 3.1e-265 917.9 479 93.3
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 1.2e-264 916.0 475 93.5
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 1.6e-264 915.6 479 93.3
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 1.6e-264 915.6 479 93.5
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 5.0e-263 910.6 481 93.3
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 2.5e-262 908.3 499 89.8
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 1.8e-260 902.1 479 91.9
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 8.9e-260 899.8 484 92.4
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 2.5e-254 881.7 479 88.7
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 1.2e-248 862.8 499 86.8
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 2.5e-230 802.0 479 81.0
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 4.6e-224 781.2 411 92.7
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 3.4e-219 765.0 491 73.5
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 1.9e-217 759.2 475 75.4
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 3.2e-217 758.4 491 72.9
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 4.2e-217 758.1 483 72.5
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 7.1e-217 757.3 486 74.3
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 9.3e-217 756.9 482 73.4
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.2e-216 756.5 478 74.5
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.6e-216 756.1 478 74.5
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 2.1e-216 755.7 482 73.0
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 2.7e-216 755.4 484 73.8
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 3.5e-216 755.0 484 74.6
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 6.0e-216 754.2 484 74.6
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 6.0e-216 754.2 487 74.1
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 7.9e-216 753.8 479 74.5
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 1.0e-215 753.4 484 73.6
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.7e-215 752.7 478 74.1
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 2.3e-215 752.3 479 74.7
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 3.9e-215 751.5 477 72.5
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 5.1e-215 751.1 488 72.3
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 6.6e-215 750.7 487 73.1
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 6.6e-215 750.7 482 72.8
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 1.1e-214 750.0 484 72.7
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 1.1e-214 750.0 478 73.6
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 1.5e-214 749.6 487 72.9
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 2.5e-214 748.8 478 73.6
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 3.3e-214 748.4 495 71.5
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 3.3e-214 748.4 487 72.9
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 4.3e-214 748.0 476 73.3
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 7.4e-214 747.3 478 73.8
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 9.6e-214 746.9 495 71.3
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 1.6e-213 746.1 483 73.5
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 2.8e-213 745.3 485 72.4
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 4.8e-213 744.6 479 73.7
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 6.2e-213 744.2 490 73.7
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 1.1e-212 743.4 477 75.3
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 1.4e-212 743.0 480 74.4
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.8e-212 742.7 487 72.7
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 4.0e-212 741.5 484 72.7
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 5.3e-212 741.1 481 74.2
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 9.0e-212 740.3 480 72.5
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 2.0e-211 739.2 484 72.3
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 2.0e-211 739.2 476 72.7
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 3.4e-211 738.4 486 73.0
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 3.4e-211 738.4 483 72.0
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 3.4e-211 738.4 518 68.0
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 4.5e-211 738.0 484 73.3
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 7.6e-211 737.3 479 73.1
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 9.9e-211 736.9 491 70.5
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 1.3e-210 736.5 483 71.8
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.3e-210 736.5 478 72.6
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 1.7e-210 736.1 483 71.8
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 2.2e-210 735.7 475 72.4
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 3.8e-210 734.9 509 69.7
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 4.9e-210 734.6 480 71.9
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 4.9e-210 734.6 479 72.2
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.4e-209 733.0 485 71.3
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.9e-209 732.6 498 71.5
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 2.4e-209 732.3 484 72.5
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 2.4e-209 732.3 475 73.3
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 5.5e-209 731.1 480 72.7
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 7.1e-209 730.7 484 72.5
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 1.2e-208 729.9 480 71.5
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 3.5e-208 728.4 465 73.3
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 6.0e-208 727.6 473 72.3
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 6.0e-208 727.6 491 70.3
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 1.0e-207 726.9 483 72.3
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 5.6e-206 721.1 488 71.5
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 9.6e-206 720.3 485 70.3
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.3e-205 719.9 456 75.4
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 2.4e-204 715.7 467 73.0
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 3.4e-203 711.8 488 69.5
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 2.9e-202 708.8 574 61.7
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 3.2e-201 705.3 572 61.7
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 4.2e-201 704.9 491 67.6
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 1.6e-200 703.0 479 70.4
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 2.1e-200 702.6 478 69.2
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 7.9e-200 700.7 482 69.1
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 1.1e-198 696.8 487 69.6
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 3.1e-196 688.7 559 61.9
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.6e-192 676.4 540 62.4
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 4.3e-190 668.3 475 66.1
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 1.3e-189 666.8 568 59.9
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 5.3e-188 661.4 411 74.9
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 9.1e-188 660.6 478 66.5
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 7.7e-187 657.5 411 75.9
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 1.0e-186 657.1 593 57.3
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 4.5e-179 631.7 361 88.1
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 7.2e-177 624.4 480 61.5
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 1.8e-175 619.8 333 92.5
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 5.2e-175 618.2 325 93.5
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 2.6e-174 615.9 443 66.1
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 2.4e-172 609.4 422 68.5
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.8e-164 583.2 374 73.3
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 9.1e-164 580.9 480 57.5
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 1.2e-163 580.5 493 56.6
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 1.1e-161 573.9 373 71.6
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 2.1e-160 569.7 361 76.2
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 6.1e-160 568.2 373 71.0
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 4.0e-159 565.5 327 87.8
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 5.0e-154 548.5 342 75.1
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 3.0e-151 539.3 327 79.2
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.6e-150 536.2 327 77.4
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 7.8e-147 524.6 327 76.1
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 1.3e-146 523.9 481 54.5
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 7.0e-140 501.5 328 73.8
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.7e-131 473.0 296 75.3
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.5e-129 467.2 351 66.4
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 4.6e-99 365.9 442 43.4
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.3e-98 364.4 222 77.0
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 1.1e-95 354.8 387 47.0
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 4.8e-88 329.3 426 43.0
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 9.0e-87 325.1 210 72.4
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 7.9e-83 312.0 223 62.8
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 3.9e-74 283.1 186 71.5
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 9.7e-73 278.5 159 82.4
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 9.7e-73 278.5 159 82.4
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.5e-70 269.6 159 81.1
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 1.5e-65 254.6 145 77.9
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 1.2e-54 218.4 406 33.5
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 2.5e-44 184.1 119 78.2
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 3.0e-42 177.2 106 79.2
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 8.8e-42 175.6 94 87.2
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.0e-41 174.5 93 88.2
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.3e-40 171.8 106 80.2
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 1.6e-38 164.9 134 58.2
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.3e-29 135.2 91 70.3
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.4e-18 98.6 67 61.2
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 5.8e-17 93.2 87 52.9
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.8e-17 93.2 65 63.1
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 2.2e-16 91.3 76 59.2
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 1.4e-15 88.6 70 60.0
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 1.6e-14 85.1 69 60.9
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 2.4e-07 61.2 130 33.8
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 6.0e-06 56.6 34 70.6


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