Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 9.7e-147 523.5 266 100.0
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 8.5e-143 510.4 266 97.4
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 8.5e-143 510.4 266 97.4
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 6.1e-141 504.2 269 96.3
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 1.1e-137 493.4 270 93.0
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.1e-134 483.4 271 92.3
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 1.2e-133 479.9 270 90.4
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 6.1e-133 477.6 267 92.1
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 2.3e-132 475.7 267 91.4
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 6.5e-127 457.6 269 87.4
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 6.5e-127 457.6 265 87.9
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 1.5e-126 456.4 269 88.5
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 4.2e-126 454.9 268 89.2
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 5.5e-126 454.5 269 87.0
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 1.2e-112 410.2 273 81.0
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 3.5e-112 408.7 229 91.7
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 3.3e-102 375.6 268 73.5
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 3.4e-99 365.5 272 73.2
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 9.2e-89 330.9 235 75.3
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 1.6e-88 330.1 219 79.0
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 2.0e-88 329.7 235 76.6
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 1.0e-87 327.4 210 81.0
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.7e-87 326.6 268 67.2
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 2.3e-87 326.2 226 76.1
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 3.9e-87 325.5 268 67.2
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 5.0e-87 325.1 275 66.5
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 6.6e-87 324.7 278 66.2
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 6.6e-87 324.7 234 74.8
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 8.6e-87 324.3 213 79.8
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.9e-86 323.2 216 79.2
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 2.5e-86 322.8 268 68.7
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 3.3e-86 322.4 216 76.9
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 7.3e-86 321.2 199 82.9
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.2e-85 320.5 208 79.8
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 1.6e-85 320.1 199 83.4
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 2.8e-85 319.3 215 76.7
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 2.8e-85 319.3 233 72.5
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 3.6e-85 318.9 265 66.4
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 4.7e-85 318.5 199 82.9
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 4.7e-85 318.5 216 77.3
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 4.7e-85 318.5 215 78.1
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 6.2e-85 318.2 216 77.3
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 6.2e-85 318.2 228 73.7
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 8.1e-85 317.8 217 77.0
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 8.1e-85 317.8 218 77.5
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 2.3e-84 316.2 201 80.1
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.1e-84 315.8 267 66.3
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 3.1e-84 315.8 274 65.0
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 3.1e-84 315.8 267 64.4
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 3.1e-84 315.8 239 71.5
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 4.0e-84 315.5 220 75.0
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 5.2e-84 315.1 218 73.4
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 6.8e-84 314.7 234 70.5
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 8.9e-84 314.3 243 71.2
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 1.2e-83 313.9 195 82.6
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 1.5e-83 313.5 200 79.5
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.5e-83 313.5 267 65.9
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 1.5e-83 313.5 216 74.5
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 1.5e-83 313.5 190 82.6
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 2.0e-83 313.2 270 65.9
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 2.0e-83 313.2 198 78.3
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.0e-83 313.2 267 65.9
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 2.0e-83 313.2 267 64.0
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 2.0e-83 313.2 204 78.4
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 2.0e-83 313.2 208 77.4
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 2.6e-83 312.8 272 64.0
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 2.6e-83 312.8 200 80.0
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 7.5e-83 311.2 267 67.0
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 7.5e-83 311.2 217 75.6
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 9.9e-83 310.8 215 74.4
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 9.9e-83 310.8 267 64.0
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.7e-82 310.1 267 64.4
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 1.7e-82 310.1 200 80.5
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.2e-82 309.7 267 64.4
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 6.4e-82 308.1 226 72.6
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 6.4e-82 308.1 188 81.4
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.1e-81 307.4 275 61.5
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 1.4e-81 307.0 273 65.6
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 1.9e-81 306.6 202 78.2
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 1.9e-81 306.6 193 81.3
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 1.9e-81 306.6 263 65.8
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 4.1e-81 305.4 277 61.0
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 7.1e-81 304.7 247 67.2
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 7.1e-81 304.7 241 68.0
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 1.2e-80 303.9 188 81.9
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 3.5e-80 302.4 267 63.3
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 4.6e-80 302.0 204 76.0
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 4.6e-80 302.0 196 77.0
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 4.6e-80 302.0 265 62.6
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 6.0e-80 301.6 198 78.3
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 1.0e-79 300.8 198 78.8
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 1.0e-79 300.8 266 63.5
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 5.1e-79 298.5 203 74.9
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 5.1e-79 298.5 187 81.3
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 1.9e-78 296.6 193 76.2
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 2.5e-78 296.2 238 68.5
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 9.5e-78 294.3 203 76.8
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 3.6e-77 292.4 197 75.6
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 1.7e-74 283.5 192 75.5
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 7.3e-70 268.1 265 60.4
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 9.6e-70 267.7 236 62.3
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 2.1e-69 266.5 215 61.9
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.4e-68 263.1 238 64.7
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 3.2e-65 252.7 192 65.1
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 7.3e-62 241.5 199 60.3
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 6.9e-60 235.0 197 57.4
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 1.0e-55 221.1 206 63.1
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 9.6e-54 214.5 204 62.3
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.8e-52 210.3 127 84.3
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 1.3e-50 204.1 214 55.1
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 7.4e-46 188.3 193 51.3
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 2.4e-44 183.3 108 83.3
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 9.0e-44 181.4 184 49.5
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 1.2e-43 181.0 135 70.4
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 3.4e-43 179.5 182 54.9
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 9.0e-36 154.8 108 64.8
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 1.9e-33 147.1 188 42.0
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.3e-29 132.1 117 66.7
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 5.1e-23 112.5 84 65.5
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 8.8e-23 111.7 73 80.8
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 5.9e-19 99.0 95 62.1
BcaB01g05146 Brassica carinata HOM05D039718 ORTHO05D031954 2.2e-18 97.1 103 53.4
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 8.8e-15 85.1 48 81.2
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 6.3e-13 79.0 46 87.0
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 1.8e-12 77.4 67 64.2
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 9.7e-06 55.1 44 56.8


User provided reference genes

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