Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 3.7e-117 425.2 274 100.0
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 8.2e-109 397.5 263 99.6
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 2.2e-101 372.9 263 94.7
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 2.5e-97 359.4 284 83.8
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 5.7e-94 348.2 263 90.1
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 1.2e-91 340.5 262 90.5
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 3.8e-90 335.5 261 84.7
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 1.2e-78 297.4 272 80.9
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 1.9e-65 253.4 221 78.7
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 9.5e-65 251.1 220 83.2
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 5.2e-63 245.4 220 81.8
BraA06t26977Z Brassica rapa HOM05D007214 ORTHO05D008907 1.2e-54 217.6 222 78.8
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 3.4e-54 216.1 223 76.7
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 7.8e-51 204.9 218 69.7
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 5.6e-49 198.7 263 64.3
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 1.0e-42 177.9 261 44.4
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 1.8e-42 177.2 223 56.5
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 9.9e-38 161.4 263 41.1
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 4.2e-36 156.0 267 39.3
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 9.6e-33 144.8 228 56.1
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 6.9e-31 138.7 282 43.3
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 9.0e-31 138.3 269 34.6
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.9e-29 133.3 225 38.7
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 3.8e-29 132.9 225 46.7
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 3.8e-29 132.9 224 38.4
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 1.1e-28 131.3 229 38.9
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.4e-28 131.0 284 35.6
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 1.9e-28 130.6 275 33.5
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 5.5e-28 129.0 305 36.4
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 1.2e-27 127.9 294 34.0
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 2.1e-27 127.1 299 37.1
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 7.9e-27 125.2 275 44.4
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 5.1e-26 122.5 270 47.0
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 1.9e-25 120.6 222 54.1
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.8e-23 114.0 263 33.8
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 1.2e-22 111.3 219 34.2
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 5.9e-22 109.0 262 32.1
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 5.9e-22 109.0 223 36.8
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 3.8e-21 106.3 232 32.8
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 8.5e-21 105.1 221 39.4
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 1.4e-20 104.4 230 33.5
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 1.4e-20 104.4 244 40.2
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 2.5e-20 103.6 262 44.3
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 4.2e-20 102.8 221 32.6
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 4.2e-20 102.8 222 31.5
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 1.6e-19 100.9 239 32.2
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 2.1e-19 100.5 224 34.4
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 2.1e-19 100.5 256 32.4
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 3.6e-19 99.8 227 32.6
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 3.0e-18 96.7 190 55.8
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 3.9e-18 96.3 224 33.5
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 5.1e-18 95.9 224 40.6
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 6.7e-18 95.5 239 45.2
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 1.5e-17 94.4 146 41.8
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 1.9e-17 94.0 224 48.2
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 2.5e-17 93.6 227 40.1
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 5.7e-17 92.4 124 41.9
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 7.4e-17 92.0 222 47.7
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 6.3e-16 89.0 267 43.4
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 1.4e-15 87.8 224 45.1
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 1.4e-15 87.8 192 52.1
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 4.1e-15 86.3 223 30.0
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 5.3e-15 85.9 259 29.7
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 5.3e-15 85.9 231 36.4
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 5.9e-14 82.4 259 40.9
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 3.8e-13 79.7 222 34.7
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 3.8e-13 79.7 165 46.7
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 5.0e-13 79.3 262 37.4
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 1.9e-12 77.4 120 43.3
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 5.5e-12 75.9 205 50.2
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 3.6e-11 73.2 225 42.2
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 6.1e-11 72.4 112 41.1
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 7.9e-11 72.0 74 51.4
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 2.3e-10 70.5 238 35.7
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 8.8e-10 68.6 208 45.2
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 1.5e-09 67.8 261 35.2
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 4.4e-09 66.2 216 37.0
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 4.4e-09 66.2 126 34.9
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 5.7e-09 65.9 121 38.0
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 4.8e-08 62.8 211 29.4
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 8.2e-08 62.0 228 25.9
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 2.4e-07 60.5 265 26.8
Sabra17G0065100 Salix brachista HOM05D007214 ORTHO05D008907 3.1e-07 60.1 99 36.4
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 3.1e-07 60.1 79 36.7
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 4.1e-07 59.7 223 32.7
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 9.1e-07 58.5 217 27.2
AT1G51430 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 1.2e-06 58.2 171 34.5
Sabra17G0063300 Salix brachista HOM05D007214 ORTHO05D008907 1.5e-06 57.8 63 46.0
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 2.0e-06 57.4 224 33.5
CDE02G1584 Ceratophyllum demersum HOM05D007214 ORTHO05D008907 3.4e-06 56.6 122 36.9
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 4.5e-06 56.2 123 35.8
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 4.5e-06 56.2 194 35.6


User provided reference genes

Program Settings