Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 7.9e-148 527.3 312 100.0
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 1.5e-98 363.6 284 83.8
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 2.6e-98 362.8 284 83.8
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 2.9e-94 349.4 284 82.4
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 5.7e-90 335.1 283 77.7
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 3.1e-88 329.3 288 79.2
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 7.0e-88 328.2 284 78.9
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 7.0e-80 301.6 284 75.0
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 1.3e-65 254.2 226 79.2
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 1.7e-65 253.8 221 75.6
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 1.4e-64 250.8 225 79.6
BraA06t26977Z Brassica rapa HOM05D007214 ORTHO05D008907 5.6e-61 238.8 223 78.9
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 1.1e-53 214.5 223 72.2
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 3.4e-50 203.0 218 66.5
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 1.0e-46 191.4 285 55.8
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 1.2e-44 184.5 283 41.7
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 1.1e-43 181.4 223 56.5
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 9.3e-40 168.3 285 38.6
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 2.5e-37 160.2 288 37.8
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.6e-36 157.5 288 42.7
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.1e-36 157.1 292 38.7
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 2.6e-34 150.2 230 41.7
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 5.8e-34 149.1 285 35.4
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 7.6e-34 148.7 305 38.4
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.9e-33 146.7 236 39.8
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 1.1e-32 144.8 298 37.6
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 3.2e-32 143.3 227 39.6
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 7.1e-32 142.1 225 47.6
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 9.3e-32 141.7 228 52.2
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 9.3e-32 141.7 291 33.0
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 1.6e-31 141.0 304 35.5
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 1.2e-26 124.8 222 52.3
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 2.6e-26 123.6 285 32.3
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 3.4e-26 123.2 219 35.6
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 5.8e-26 122.5 263 34.6
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 9.9e-26 121.7 244 41.8
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 1.7e-25 120.9 286 39.5
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 8.4e-25 118.6 243 32.9
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 1.4e-24 117.9 292 40.4
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 7.1e-24 115.5 221 35.3
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 1.2e-23 114.8 219 32.9
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 2.1e-23 114.0 221 38.0
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 2.1e-23 114.0 226 34.5
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 3.0e-22 110.2 221 33.5
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 3.9e-22 109.8 211 36.5
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 1.1e-21 108.2 227 34.4
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 1.1e-21 108.2 223 34.5
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 2.5e-21 107.1 253 36.8
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 7.4e-21 105.5 124 46.8
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 7.4e-21 105.5 278 31.3
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 2.1e-20 104.0 223 33.6
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 3.7e-20 103.2 239 43.9
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 1.8e-19 100.9 223 39.9
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 6.9e-19 99.0 224 44.2
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 9.0e-19 98.6 146 42.5
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 1.5e-18 97.8 284 38.7
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 4.5e-18 96.3 222 45.9
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 4.5e-18 96.3 190 53.2
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 2.2e-17 94.0 223 31.4
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 8.4e-17 92.0 224 45.1
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 5.5e-16 89.4 227 35.2
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 7.1e-16 89.0 289 39.4
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 1.6e-15 87.8 281 28.1
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 4.6e-15 86.3 222 33.3
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 3.0e-14 83.6 129 51.2
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 5.1e-14 82.8 192 46.9
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 5.7e-13 79.3 262 34.4
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 5.7e-13 79.3 224 41.5
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 1.3e-12 78.2 112 43.8
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 8.2e-12 75.5 205 47.8
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 1.1e-11 75.1 120 40.8
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 3.1e-11 73.6 232 34.1
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 4.1e-11 73.2 213 44.6
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 1.2e-10 71.6 74 51.4
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 1.2e-10 71.6 151 35.8
AT1G51430 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 2.0e-10 70.9 171 38.6
Sabra17G0065100 Salix brachista HOM05D007214 ORTHO05D008907 2.0e-10 70.9 99 40.4
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 2.0e-10 70.9 281 34.2
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 3.4e-10 70.1 81 46.9
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 5.9e-10 69.3 247 31.6
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 7.6e-10 68.9 223 32.3
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 1.0e-09 68.6 231 34.2
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.3e-09 68.2 217 28.6
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 1.3e-09 68.2 226 36.7
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 1.1e-08 65.1 126 34.9
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 4.2e-08 63.2 227 26.4
CDE02G1584 Ceratophyllum demersum HOM05D007214 ORTHO05D008907 9.3e-08 62.0 122 38.5
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 9.3e-08 62.0 283 26.5
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 2.7e-07 60.5 81 37.0
Psat3g176600 Pisum sativum HOM05D007214 ORTHO05D008907 7.9e-07 58.9 126 34.1
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 3.9e-06 56.6 124 35.5
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 3.9e-06 56.6 209 31.6
Sabra17G0063300 Salix brachista HOM05D007214 ORTHO05D008907 5.1e-06 56.2 75 40.0
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 8.7e-06 55.5 81 55.6


User provided reference genes

Program Settings