Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p40010 Brassica napus HOM05D008352 ORTHO05D011361 3.4e-91 338.6 202 100.0
C07p38160 Brassica napus HOM05D008352 ORTHO05D011361 5.3e-89 331.3 202 97.0
BraA06t26916Z Brassica rapa HOM05D008352 ORTHO05D011361 4.1e-81 305.1 182 100.0
BolC7t44338H Brassica oleracea HOM05D008352 ORTHO05D011361 3.8e-79 298.5 182 98.4
Sp2g17870 Schrenkiella parvula HOM05D008352 ORTHO05D011361 4.3e-54 215.3 158 73.4
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 6.8e-52 208.0 159 69.2
Sp1g26250 Schrenkiella parvula HOM05D008352 ORTHO05D011361 7.8e-40 167.9 145 62.8
Carub.0005s0735 Capsella rubella HOM05D008352 ORTHO05D011361 4.3e-38 162.2 159 59.7
BraA09t39127Z Brassica rapa HOM05D008352 ORTHO05D011361 9.6e-38 161.0 168 54.8
BcaB07g32652 Brassica carinata HOM05D008352 ORTHO05D011361 1.3e-37 160.6 146 61.0
A09p36020 Brassica napus HOM05D008352 ORTHO05D011361 2.1e-37 159.8 148 60.1
AL5G18540 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 6.2e-37 158.3 151 59.6
AT3G28810 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 8.1e-37 157.9 151 59.6
CARHR152080 Cardamine hirsuta HOM05D008352 ORTHO05D011361 6.9e-36 154.8 156 56.4
AT3G28820 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 2.0e-35 153.3 151 57.6
A08p24470 Brassica napus HOM05D008352 ORTHO05D011361 2.0e-35 153.3 148 58.1
BraA08t34403Z Brassica rapa HOM05D008352 ORTHO05D011361 2.0e-35 153.3 148 58.1
BcaB07g32675 Brassica carinata HOM05D008352 ORTHO05D011361 2.6e-35 152.9 148 58.1
C05p29370 Brassica napus HOM05D008352 ORTHO05D011361 2.6e-35 152.9 148 58.1
BolC5t31669H Brassica oleracea HOM05D008352 ORTHO05D011361 2.6e-35 152.9 148 58.1
C03p76750 Brassica napus HOM05D008352 ORTHO05D011361 1.7e-34 150.2 159 55.3
BcaC01g00190 Brassica carinata HOM05D008352 ORTHO05D011361 6.4e-34 148.3 148 58.8
Carub.0005s0757 Capsella rubella HOM05D008352 ORTHO05D011361 2.7e-32 142.9 148 57.4
Aa31LG2G4400 Aethionema arabicum HOM05D008352 ORTHO05D011361 2.3e-31 139.8 149 56.4
AL5G18840 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 6.6e-31 138.3 145 55.2
AT3G28980 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 8.7e-31 137.9 146 55.5
BcaC06g33684 Brassica carinata HOM05D007093 ORTHO05D008910 1.9e-30 136.7 76 97.4
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 1.5e-27 127.1 141 55.3
BraA02t08642Z Brassica rapa HOM05D008352 ORTHO05D024480 9.3e-25 117.9 110 67.3
BcaNung06844 Brassica carinata HOM05D008352 ORTHO05D011361 1.6e-24 117.1 103 62.1
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 3.5e-24 115.9 141 52.5
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.3e-23 114.0 141 49.6
A02p36470 Brassica napus HOM05D008352 ORTHO05D024480 3.3e-22 109.4 105 65.7
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 7.4e-22 108.2 108 54.6
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 2.1e-21 106.7 141 47.5
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 4.8e-21 105.5 140 45.0
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 1.4e-20 104.0 141 48.2
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.4e-20 104.0 153 46.4
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 3.1e-20 102.8 146 43.8
AL5G18530 Arabidopsis lyrata HOM05D008352 ORTHO05D011250 1.2e-19 100.9 134 51.5
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 2.0e-19 100.1 140 45.7
AT5G48575 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 4.5e-19 99.0 97 57.7
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 5.8e-19 98.6 142 43.7
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 5.8e-19 98.6 142 43.7
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 2.2e-18 96.7 139 44.6
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 2.9e-18 96.3 141 44.7
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 2.9e-18 96.3 146 41.1
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 2.9e-18 96.3 146 41.1
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 2.9e-18 96.3 137 45.3
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 8.4e-18 94.7 141 44.7
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 1.1e-17 94.4 146 40.4
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 2.5e-17 93.2 146 40.4
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 2.5e-17 93.2 146 40.4
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 4.2e-17 92.4 135 43.7
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 5.5e-17 92.0 135 43.7
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.2e-16 90.9 154 42.2
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.2e-16 90.9 154 42.2
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.2e-16 90.9 154 42.2
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 1.6e-16 90.5 130 44.6
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 1.6e-16 90.5 130 44.6
BcaC03g17568 Brassica carinata HOM05D008352 ORTHO05D024480 1.0e-15 87.8 121 50.4
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 3.9e-15 85.9 124 43.5
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 5.1e-15 85.5 129 41.9
CARHR151800 Cardamine hirsuta HOM05D008352 ORTHO05D011361 1.1e-14 84.3 68 64.7
Thhalv10009470m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 1.5e-14 84.0 140 44.3
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 1.9e-14 83.6 149 38.9
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 7.4e-14 81.6 118 43.2
AT3G28770 Arabidopsis thaliana HOM05D011893 ORTHO05D013967 9.6e-14 81.3 149 36.9
AL5G18500 Arabidopsis lyrata HOM05D011893 ORTHO05D013967 1.3e-13 80.9 148 39.2
Aa31LG2G4440 Aethionema arabicum HOM05D011893 ORTHO05D013967 1.4e-12 77.4 148 34.5
BcaC03g17528 Brassica carinata HOM05D011893 ORTHO05D013967 9.0e-12 74.7 149 36.2
BolC2t11550H Brassica oleracea HOM05D011893 ORTHO05D013967 9.0e-12 74.7 149 36.2
C02p54900 Brassica napus HOM05D011893 ORTHO05D013967 1.2e-11 74.3 149 36.2
THA.LOC104808023 Tarenaya hassleriana HOM05D011893 ORTHO05D013967 2.6e-11 73.2 151 35.8
SpUn0298_0010 Schrenkiella parvula HOM05D011893 ORTHO05D013967 1.3e-10 70.9 138 35.5
AT5G39870 Arabidopsis thaliana HOM05D008352 ORTHO05D014403 5.0e-10 68.9 192 30.7
A02p36060 Brassica napus HOM05D011893 ORTHO05D013967 8.4e-10 68.2 145 34.5
BraA02t08605Z Brassica rapa HOM05D011893 ORTHO05D013967 8.4e-10 68.2 145 34.5
AL7G50270 Arabidopsis lyrata HOM05D008352 ORTHO05D014403 1.1e-09 67.8 201 32.3
BcaB07g30118 Brassica carinata HOM05D011893 ORTHO05D013967 4.2e-09 65.9 200 30.0
THA.LOC104823935 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 2.1e-08 63.5 183 29.0
C04p46350 Brassica napus HOM05D008352 ORTHO05D014403 3.5e-08 62.8 191 28.8
BolC4t26221H Brassica oleracea HOM05D008352 ORTHO05D014403 3.5e-08 62.8 191 28.8
THA.LOC104823938 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 3.5e-08 62.8 184 30.4
A04p12630 Brassica napus HOM05D008352 ORTHO05D014403 4.6e-08 62.4 191 27.7
BraA04t16920Z Brassica rapa HOM05D008352 ORTHO05D014403 4.6e-08 62.4 191 27.7
Sp7g02170 Schrenkiella parvula HOM05D008352 ORTHO05D014403 1.0e-07 61.2 196 29.6
CARHR262310 Cardamine hirsuta HOM05D008352 ORTHO05D014403 1.3e-07 60.8 153 35.3
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 1.8e-07 60.5 140 35.7
C02p55400 Brassica napus HOM05D008352 ORTHO05D024480 1.8e-07 60.5 47 72.3
BolC2t11597H Brassica oleracea HOM05D008352 ORTHO05D024480 1.8e-07 60.5 47 72.3
BcaB06g27386 Brassica carinata HOM05D008352 ORTHO05D014403 5.1e-07 58.9 200 28.5
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 8.7e-07 58.2 97 40.2


User provided reference genes

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