Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 5.4e-193 678.3 608 100.0
BcaNung02477 Brassica carinata HOM05D004923 ORTHO05D005940 9.5e-166 587.8 611 79.1
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 1.5e-155 553.9 615 69.3
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 2.2e-138 496.9 625 65.1
BraA06t26683Z Brassica rapa HOM05D004923 ORTHO05D005940 4.9e-130 469.2 608 72.7
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 1.4e-121 441.0 632 60.9
BolC7t44596H Brassica oleracea HOM05D004923 ORTHO05D005940 3.3e-118 429.9 615 65.0
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 2.8e-117 426.8 633 63.5
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 2.7e-112 410.2 632 67.7
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.7e-106 391.0 633 65.6
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 2.2e-106 390.6 632 53.2
Carub.0006s2521 Capsella rubella HOM05D004923 ORTHO05D005940 4.1e-84 316.6 634 49.5
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 3.6e-56 223.8 632 47.9
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.6e-48 198.4 639 35.7
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 8.1e-48 196.1 636 35.4
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 7.6e-46 189.5 636 43.6
Aa31LG11G9060 Aethionema arabicum HOM05D004923 ORTHO05D005940 7.1e-44 183.0 632 44.5
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 3.3e-41 174.1 609 40.6
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 2.6e-38 164.5 609 41.1
THA.LOC104821702 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 9.9e-38 162.5 630 45.7
AT3G05130 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 1.2e-35 155.6 636 33.5
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 1.2e-35 155.6 608 29.3
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 1.2e-35 155.6 608 29.3
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 3.6e-32 144.1 630 38.7
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 9.0e-31 139.4 604 31.8
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 3.4e-30 137.5 649 33.0
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 9.9e-30 136.0 247 37.2
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 1.3e-29 135.6 243 40.3
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 8.4e-29 132.9 636 40.7
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 7.1e-28 129.8 613 33.6
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 1.6e-27 128.6 647 43.6
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 6.7e-26 123.2 240 35.0
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 8.7e-26 122.9 255 31.4
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 6.2e-24 116.7 642 41.7
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 1.4e-23 115.5 200 40.0
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 1.8e-23 115.2 232 34.9
AL3G15330 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 3.1e-23 114.4 225 36.0
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 3.1e-23 114.4 232 34.9
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 4.0e-23 114.0 200 37.0
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 5.3e-23 113.6 260 34.6
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 1.2e-22 112.5 197 38.6
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 2.6e-22 111.3 266 31.6
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 3.4e-22 110.9 197 38.1
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 1.3e-21 109.0 206 36.4
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 2.2e-21 108.2 229 36.7
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 2.2e-21 108.2 144 43.1
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 3.8e-21 107.5 260 30.0
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 8.4e-21 106.3 643 28.8
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 1.9e-20 105.1 589 35.7
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 7.1e-20 103.2 243 33.3
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 4.6e-19 100.5 254 29.9
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 7.9e-19 99.8 137 44.5
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 1.0e-18 99.4 628 26.0
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 3.0e-18 97.8 638 43.9
Atru.chr2.532 Acer truncatum HOM05D004923 ORTHO05D005940 3.9e-18 97.4 128 44.5
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 1.5e-17 95.5 552 23.0
BcaC05g29999 Brassica carinata HOM05D004923 ORTHO05D005940 7.4e-17 93.2 599 34.1
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 7.4e-17 93.2 219 30.6
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 3.1e-15 87.8 255 37.3
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 5.3e-15 87.0 566 39.2
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 5.3e-15 87.0 264 26.5
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 6.9e-15 86.7 209 29.7
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 6.9e-15 86.7 232 28.9
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 9.0e-15 86.3 265 27.2
BcaNung04360 Brassica carinata HOM05D004923 ORTHO05D005940 9.0e-15 86.3 78 76.9
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 9.0e-15 86.3 264 26.5
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 9.0e-15 86.3 633 37.6
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 1.5e-14 85.5 219 30.1
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 4.5e-14 84.0 264 26.1
BcaC01g00704 Brassica carinata HOM05D004923 ORTHO05D032366 5.8e-14 83.6 237 31.2
BolC3t20618H Brassica oleracea HOM05D004923 ORTHO05D032366 5.8e-14 83.6 237 31.2
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 1.7e-13 82.0 569 33.0
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 2.2e-13 81.6 211 36.0
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 3.8e-13 80.9 229 27.9
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 4.9e-13 80.5 130 40.8
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 4.9e-13 80.5 264 25.0
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 6.5e-13 80.1 137 37.2
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 6.5e-13 80.1 142 37.3
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 8.4e-13 79.7 624 25.3
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 8.4e-13 79.7 637 22.4
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 1.1e-12 79.3 267 30.0
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.4e-12 79.0 137 36.5
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 1.4e-12 79.0 126 38.1
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.9e-12 78.6 137 35.8
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 4.2e-12 77.4 241 26.6
ECA233G0604 Erigeron canadensis HOM05D004923 ORTHO05D005940 4.2e-12 77.4 122 48.4
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 4.2e-12 77.4 132 39.4
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 5.5e-12 77.0 134 36.6
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 5.5e-12 77.0 137 35.8
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 9.3e-12 76.3 266 27.1
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 9.3e-12 76.3 132 37.1
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 1.6e-11 75.5 110 46.4
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 1.6e-11 75.5 266 26.3
AUR62000899 Chenopodium quinoa HOM05D004923 ORTHO05D005940 2.1e-11 75.1 264 23.5
Psat6g148400 Pisum sativum HOM05D004923 ORTHO05D005940 2.1e-11 75.1 137 34.3
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 4.6e-11 73.9 187 33.2
Aqoxy2G03170 Aquilegia oxysepala HOM05D004923 ORTHO05D005940 1.0e-10 72.8 265 35.5
HanXRQChr15g0493471 Helianthus annuus HOM05D004923 ORTHO05D005940 1.3e-10 72.4 265 27.2
TPR.G2744 Trifolium pratense HOM05D004923 ORTHO05D005940 1.3e-10 72.4 124 34.7
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 3.9e-10 70.9 159 39.0
AUR62005075 Chenopodium quinoa HOM05D004923 ORTHO05D005940 6.7e-10 70.1 266 25.6
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 6.7e-10 70.1 230 30.4
Lj8C55T15 Lonicera japonica HOM05D004923 ORTHO05D005940 1.1e-09 69.3 139 37.4
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 1.1e-09 69.3 589 34.8
MD04G1212300 Malus domestica HOM05D004923 ORTHO05D005940 1.5e-09 68.9 162 34.6
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 1.5e-09 68.9 125 36.8
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 2.5e-09 68.2 260 28.5
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 3.3e-09 67.8 203 33.0
Lj5g0013750 Lotus japonicus HOM05D004923 ORTHO05D005940 3.3e-09 67.8 153 29.4
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 3.3e-09 67.8 261 28.7
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 4.3e-09 67.4 105 41.0
Ca_10079_v3 Cicer arietinum L. HOM05D004923 ORTHO05D005940 4.3e-09 67.4 153 31.4
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 5.7e-09 67.0 102 40.2
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 7.4e-09 66.6 159 34.6
Medtr1g082215 Medicago truncatula HOM05D004923 ORTHO05D005940 1.3e-08 65.9 136 32.4
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 2.2e-08 65.1 224 24.6
Sed0008414 Sechium edule HOM05D004923 ORTHO05D005940 2.2e-08 65.1 234 27.4
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 3.7e-08 64.3 267 24.7
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 3.7e-08 64.3 267 24.7
SalBow6G2889 Salvia bowleyana HOM05D004923 ORTHO05D005940 4.8e-08 63.9 256 29.7
DCAR_029454 Daucus carota HOM05D004923 ORTHO05D005940 1.4e-07 62.4 208 27.4
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 1.4e-07 62.4 261 30.7
Actinidia08545 Actinidia chinensis HOM05D004923 ORTHO05D005940 5.3e-07 60.5 84 42.9
Actinidia00480 Actinidia chinensis HOM05D001349 ORTHO05D005940 6.9e-07 60.1 84 41.7
Lsat_1_v5_gn_5_38100 Lactuca sativa HOM05D004923 ORTHO05D005940 1.5e-06 58.9 119 37.0
Ah.04g159890 Amaranthus hybridus HOM05D004923 ORTHO05D005940 2.0e-06 58.5 87 41.4
COL.COLO4_23513 Corchorus olitorius HOM05D004923 ORTHO05D005940 2.0e-06 58.5 143 37.8
PSO151G0084 Papaver somniferum HOM05D004923 ORTHO05D005940 7.7e-06 56.6 251 28.3


User provided reference genes

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