Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p36960 Brassica napus HOM05D005826 ORTHO05D004357 1.2e-75 286.6 157 100.0
BraA06t26622Z Brassica rapa HOM05D005826 ORTHO05D004357 2.0e-46 189.5 113 85.8
Thhalv10004695m.g Eutrema salsugineum HOM05D005826 ORTHO05D004357 1.4e-20 103.6 64 82.8
AL6G38590 Arabidopsis lyrata HOM05D005826 ORTHO05D004357 3.1e-20 102.4 70 71.4
Carub.0006s2438 Capsella rubella HOM05D005826 ORTHO05D004357 5.0e-18 95.1 55 85.5
Sp2g21260 Schrenkiella parvula HOM05D005826 ORTHO05D004357 5.0e-18 95.1 55 85.5
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 1.1e-17 94.0 64 70.3
AT5G26610 Arabidopsis thaliana HOM05D005826 ORTHO05D004357 1.5e-17 93.6 54 85.2
CARHR186850 Cardamine hirsuta HOM05D005826 ORTHO05D004357 1.5e-17 93.6 54 85.2
CANSAT54G1651 Cannabis sativa HOM05D005826 ORTHO05D004357 2.5e-17 92.8 64 70.3
arahy.Tifrunner.gnm1.ann1.CWLZ7L Arachis hypogaea HOM05D005826 ORTHO05D004357 7.2e-17 91.3 64 71.9
Aa31LG11G9920 Aethionema arabicum HOM05D005826 ORTHO05D004357 1.6e-16 90.1 53 83.0
FAN09G2233 Fragaria x ananassa HOM05D005826 ORTHO05D004357 1.6e-16 90.1 63 69.8
Phvul.001G222000 Phaseolus vulgaris HOM05D005826 ORTHO05D004357 1.6e-16 90.1 64 70.3
unitig_26.g9561 Utricularia gibba HOM05D005826 ORTHO05D005018 1.6e-16 90.1 64 68.8
Dinv24515 Davidia involucrata HOM05D005826 ORTHO05D004357 2.1e-16 89.7 95 52.6
Thecc.05G329600 Theobroma cacao HOM05D005826 ORTHO05D004357 2.1e-16 89.7 64 70.3
COL.COLO4_05485 Corchorus olitorius HOM05D005826 ORTHO05D004357 2.8e-16 89.4 64 68.8
Hma1.2p1_0052F.1_g030390 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 2.8e-16 89.4 63 68.3
Hma1.2p1_0052F.1_g030400 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 2.8e-16 89.4 63 68.3
MD12G1199800 Malus domestica HOM05D005826 ORTHO05D004357 2.8e-16 89.4 57 75.4
A09p05710 Brassica napus HOM05D005826 ORTHO05D004357 3.6e-16 89.0 73 63.0
BraA09t36211Z Brassica rapa HOM05D005826 ORTHO05D004357 3.6e-16 89.0 73 63.0
Eucgr.B01823 Eucalyptus grandis HOM05D005826 ORTHO05D004357 3.6e-16 89.0 64 67.2
BcaC04g23633 Brassica carinata HOM05D005826 ORTHO05D004357 4.7e-16 88.6 71 71.8
C09p06300 Brassica napus HOM05D005826 ORTHO05D004357 4.7e-16 88.6 71 71.8
BolC9t53550H Brassica oleracea HOM05D005826 ORTHO05D004357 4.7e-16 88.6 71 71.8
Migut.N00974 Erythranthe guttata HOM05D005826 ORTHO05D004357 4.7e-16 88.6 64 67.2
VMungo1383G1915 Vigna mungo HOM05D005826 ORTHO05D004357 4.7e-16 88.6 64 68.8
Lj1g0011738 Lotus japonicus HOM05D005826 ORTHO05D004357 6.1e-16 88.2 63 69.8
Manes.08G107500 Manihot esculenta HOM05D005826 ORTHO05D004357 6.1e-16 88.2 64 67.2
SGA_v2.0_scaffold22G09707 Striga asiatica HOM05D005826 ORTHO05D004357 6.1e-16 88.2 64 67.2
HPP92_006322 Vanilla planifolia HOM05D005826 ORTHO05D004357 8.0e-16 87.8 64 65.6
HPP92_027884 Vanilla planifolia HOM05D005826 ORTHO05D004357 8.0e-16 87.8 64 65.6
GSVIVG01031331001 Vitis vinifera HOM05D005826 ORTHO05D004357 8.0e-16 87.8 75 62.7
arahy.Tifrunner.gnm1.ann1.TKMT5T Arachis hypogaea HOM05D005826 ORTHO05D004357 1.4e-15 87.0 57 73.7
EL10Ac4g09561 Beta vulgaris HOM05D005826 ORTHO05D004357 1.4e-15 87.0 64 68.8
Psat3g015120 Pisum sativum HOM05D005826 ORTHO05D004357 1.4e-15 87.0 57 73.7
TPR.G1630 Trifolium pratense HOM05D005826 ORTHO05D004357 1.4e-15 87.0 57 73.7
ATR0796G273 Amborella trichopoda HOM05D005826 ORTHO05D004357 1.8e-15 86.7 62 67.7
TWI12G0016 Tripterygium wilfordii HOM05D005826 ORTHO05D004357 1.8e-15 86.7 65 69.2
TAR636G1621 Trochodendron aralioides HOM05D005826 ORTHO05D004357 1.8e-15 86.7 64 68.8
Atru.chr12.1539 Acer truncatum HOM05D005826 ORTHO05D004357 3.0e-15 85.9 57 70.2
Hund07271 Selenicereus undatus HOM05D005826 ORTHO05D004357 3.0e-15 85.9 64 67.2
DCAR_006590 Daucus carota HOM05D005826 ORTHO05D004357 4.0e-15 85.5 55 72.7
Potri.013G002100 Populus trichocarpa HOM05D005826 ORTHO05D004357 4.0e-15 85.5 57 70.2
Hund21832 Selenicereus undatus HOM05D005826 ORTHO05D004357 4.0e-15 85.5 68 63.2
THA.LOC104821749 Tarenaya hassleriana HOM05D005826 ORTHO05D004357 4.0e-15 85.5 52 78.8
PGR083G1613 Punica granatum HOM05D005826 ORTHO05D004357 5.2e-15 85.1 64 65.6
Solyc01g101250.3 Solanum lycopersicum HOM05D005826 ORTHO05D004357 5.2e-15 85.1 57 70.2
Sopen01g044700 Solanum pennellii HOM05D005826 ORTHO05D004357 5.2e-15 85.1 57 70.2
Sc09g0002410 Simmondsia chinensis HOM05D005826 ORTHO05D004357 6.8e-15 84.7 64 65.6
Sabra13G0001500 Salix brachista HOM05D005826 ORTHO05D004357 8.9e-15 84.3 57 68.4
CAN.G1248.16 Capsicum annuum HOM05D005826 ORTHO05D004357 1.2e-14 84.0 73 61.6
AUR62000478 Chenopodium quinoa HOM05D005826 ORTHO05D004357 1.2e-14 84.0 64 65.6
AUR62006820 Chenopodium quinoa HOM05D005826 ORTHO05D004357 1.2e-14 84.0 64 65.6
Lalb_Chr18g0046231 Lupinus albus HOM05D005826 ORTHO05D004357 1.5e-14 83.6 55 72.7
Mapoly0026s0010 Marchantia polymorpha HOM05D005826 ORTHO05D004357 1.5e-14 83.6 57 70.2
Pp3c20_6860 Physcomitrium patens HOM05D005826 ORTHO05D004357 1.5e-14 83.6 64 62.5
PGR083G0870 Punica granatum HOM05D005826 ORTHO05D004357 1.5e-14 83.6 94 48.9
BcaB04g19716 Brassica carinata HOM05D005826 ORTHO05D004357 2.6e-14 82.8 46 84.8
Dinv30950 Davidia involucrata HOM05D005826 ORTHO05D004357 2.6e-14 82.8 57 66.7
Actinidia17738 Actinidia chinensis HOM05D005826 ORTHO05D004357 3.4e-14 82.4 55 69.1
Aqoxy2G02470 Aquilegia oxysepala HOM05D005826 ORTHO05D004357 3.4e-14 82.4 55 70.9
Medtr7g111520 Medicago truncatula HOM05D005826 ORTHO05D004357 3.4e-14 82.4 54 72.2
Ciclev10012662m.g Citrus clementina HOM05D005826 ORTHO05D004357 4.4e-14 82.0 55 69.1
Rhsim11G0105000 Rhododendron simsii HOM05D005826 ORTHO05D004357 4.4e-14 82.0 54 70.4
vmacro01667 Vaccinium macrocarpon HOM05D005826 ORTHO05D004357 4.4e-14 82.0 54 70.4
Cfa006771 Carpinus fangiana HOM05D005826 ORTHO05D004357 5.7e-14 81.6 55 69.1
CiPaw.07G036400 Carya illinoinensis HOM05D005826 ORTHO05D004357 5.7e-14 81.6 55 69.1
Ca_09273_v3 Cicer arietinum L. HOM05D005826 ORTHO05D004357 5.7e-14 81.6 54 72.2
Haze_03986 Corylus avellana HOM05D005826 ORTHO05D004357 5.7e-14 81.6 55 69.1
FAN02G3127 Fragaria x ananassa HOM05D005826 ORTHO05D004357 5.7e-14 81.6 56 69.6
Manes.09G181300 Manihot esculenta HOM05D005826 ORTHO05D004357 7.5e-14 81.3 60 63.3
CSS0017545 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 9.8e-14 80.9 51 72.5
CSS0045001 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 9.8e-14 80.9 51 72.5
CsaV3_1G038040 Cucumis sativus L. HOM05D005826 ORTHO05D004357 9.8e-14 80.9 54 70.4
FvH4_6g08510 Fragaria vesca HOM05D005826 ORTHO05D004357 9.8e-14 80.9 53 71.7
FAN14G1262 Fragaria x ananassa HOM05D005826 ORTHO05D004357 9.8e-14 80.9 53 71.7
Glyma.19G225400 Glycine max HOM05D005826 ORTHO05D004357 1.3e-13 80.5 54 70.4
MSTRG.27910 Avicennia marina HOM05D005826 ORTHO05D004357 1.7e-13 80.1 58 67.2
Cpa.g.sc48.51 Carica papaya HOM05D005826 ORTHO05D004357 1.7e-13 80.1 51 74.5
HanXRQChr09g0247941 Helianthus annuus HOM05D005826 ORTHO05D004357 1.7e-13 80.1 54 68.5
Nn3g21953 Nelumbo nucifera HOM05D005826 ORTHO05D004357 2.8e-13 79.3 54 68.5
SMO196G0190 Selaginella moellendorffii HOM05D005826 ORTHO05D004357 2.8e-13 79.3 71 62.0
Glyma.03G228100 Glycine max HOM05D005826 ORTHO05D004357 3.7e-13 79.0 54 68.5
Potri.005G002700 Populus trichocarpa HOM05D005826 ORTHO05D004357 4.9e-13 78.6 55 67.3
CBR_g48434 Chara braunii HOM05D005826 ORTHO05D004357 6.3e-13 78.2 61 57.4
Sed0027683 Sechium edule HOM05D005826 ORTHO05D004357 8.3e-13 77.8 55 65.5
Zm00001eb089260 Zea mays HOM05D005826 ORTHO05D004357 1.4e-12 77.0 54 66.7
Lsat_1_v5_gn_7_64900 Lactuca sativa HOM05D005826 ORTHO05D004357 5.4e-12 75.1 50 68.0
Nn4g25335 Nelumbo nucifera HOM05D005826 ORTHO05D004357 5.4e-12 75.1 53 66.0
ClCG03G017880 Citrullus lanatus HOM05D005826 ORTHO05D004357 7.0e-12 74.7 56 62.5
RcHm_v2.0_Chr3g0458551 Rosa chinensis HOM05D005826 ORTHO05D004357 9.2e-12 74.3 46 71.7
SEGI_10560 Sequoiadendron giganteum HOM05D005826 ORTHO05D004357 9.2e-12 74.3 54 63.0
Cc02_g35870 Coffea canephora HOM05D005826 ORTHO05D004357 4.5e-11 72.0 47 68.1
Gohir.A13G177700 Gossypium hirsutum HOM05D005826 ORTHO05D004357 4.5e-11 72.0 47 70.2
Gohir.D13G184300 Gossypium hirsutum HOM05D005826 ORTHO05D004357 4.5e-11 72.0 47 70.2
Gorai.013G210000 Gossypium raimondii HOM05D005826 ORTHO05D004357 4.5e-11 72.0 47 70.2
AagrBONN_evm.TU.Sc2ySwM_362.2503 Anthoceros agrestis HOM05D005826 ORTHO05D004357 5.9e-11 71.6 49 69.4
Nitab4.5_0002516g0020 Nicotiana tabacum HOM05D005826 ORTHO05D004357 2.9e-10 69.3 44 70.5
PSO761G0619 Papaver somniferum HOM05D005826 ORTHO05D004357 3.8e-10 68.9 46 67.4
BcaNung03909 Brassica carinata HOM05D005826 ORTHO05D004357 5.0e-10 68.6 82 56.1
Nitab4.5_0005662g0030 Nicotiana tabacum HOM05D005826 ORTHO05D004357 6.6e-10 68.2 44 68.2
Sabra05G0000100 Salix brachista HOM05D005826 ORTHO05D004357 6.6e-10 68.2 44 68.2
Sabra05G0014200 Salix brachista HOM05D005826 ORTHO05D004357 6.6e-10 68.2 44 68.2
PSO210G7107 Papaver somniferum HOM05D005826 ORTHO05D004357 8.6e-10 67.8 46 67.4
Peaxi162Scf00194g00018 Petunia axillaris HOM05D005826 ORTHO05D004357 1.9e-09 66.6 44 65.9
QL03p011008 Quercus lobata HOM05D005826 ORTHO05D004357 4.3e-09 65.5 42 69.0
CDE01G0499 Ceratophyllum demersum HOM05D005826 ORTHO05D004357 5.6e-09 65.1 42 69.0
BcaNung03908 Brassica carinata HOM05D005826 ORTHO05D004357 7.3e-09 64.7 33 87.9
Prupe.6G304400 Prunus persica HOM05D005826 ORTHO05D004357 2.8e-08 62.8 39 69.2
FAN05G0435 Fragaria x ananassa HOM05D005826 ORTHO05D004357 8.0e-08 61.2 40 67.5
Cre03.g201250 Chlamydomonas reinhardtii HOM05D005826 ORTHO05D004357 8.9e-07 57.8 60 48.3
Ah.06g190730 Amaranthus hybridus HOM05D005826 ORTHO05D004357 5.8e-06 55.1 41 63.4


User provided reference genes

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