Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p36290 Brassica napus HOM05D002222 ORTHO05D002354 5.3e-70 267.7 148 100.0
Sp2g21950 Schrenkiella parvula HOM05D002222 ORTHO05D002354 1.0e-52 210.3 148 77.7
C07p42260 Brassica napus HOM05D002222 ORTHO05D002354 1.1e-51 206.8 148 81.1
Thhalv10004303m.g Eutrema salsugineum HOM05D002222 ORTHO05D002354 7.2e-43 177.6 147 70.1
AT5G25580 Arabidopsis thaliana HOM05D002222 ORTHO05D002354 1.6e-37 159.8 148 62.8
CARHR187790 Cardamine hirsuta HOM05D002222 ORTHO05D002354 1.1e-35 153.7 149 62.4
Carub.0006s2345 Capsella rubella HOM05D002222 ORTHO05D002354 7.3e-35 151.0 147 62.6
AL6G37410 Arabidopsis lyrata HOM05D002222 ORTHO05D002354 7.5e-32 141.0 148 59.5
Aa31LG11G4680 Aethionema arabicum HOM05D002222 ORTHO05D002354 1.6e-26 123.2 121 62.8
THA.LOC104817114 Tarenaya hassleriana HOM05D002222 ORTHO05D002354 1.5e-16 90.1 151 47.7
CSS0022357 Camellia sinensis var. sinensis HOM05D002222 ORTHO05D002354 6.6e-12 74.7 166 38.6
Lj7C710T3 Lonicera japonica HOM05D002222 ORTHO05D002354 2.1e-10 69.7 100 47.0
Actinidia13301 Actinidia chinensis HOM05D002222 ORTHO05D002354 2.8e-10 69.3 194 34.0
Thecc.09G037800 Theobroma cacao HOM05D002222 ORTHO05D002354 3.6e-10 68.9 127 40.2
Gohir.D05G051200 Gossypium hirsutum HOM05D002222 ORTHO05D002354 4.7e-10 68.6 116 42.2
Gorai.009G052900 Gossypium raimondii HOM05D002222 ORTHO05D002354 4.7e-10 68.6 116 42.2
GSVIVG01035750001 Vitis vinifera HOM05D002222 ORTHO05D002354 6.2e-10 68.2 64 56.2
Manes.16G069900 Manihot esculenta HOM05D002222 ORTHO05D002354 2.4e-09 66.2 100 42.0
Gohir.A05G049300 Gossypium hirsutum HOM05D002222 ORTHO05D002354 5.2e-09 65.1 119 39.5
Sc09g0008930 Simmondsia chinensis HOM05D002222 ORTHO05D002354 5.2e-09 65.1 175 30.9
Duzib168G0545 Durio zibethinus HOM05D002222 ORTHO05D002354 1.5e-08 63.5 127 38.6
Potri.018G035700 Populus trichocarpa HOM05D002222 ORTHO05D002354 2.0e-08 63.2 212 31.6
AUR62032392 Chenopodium quinoa HOM05D002222 ORTHO05D002354 3.4e-08 62.4 63 49.2
Lj1g0008131 Lotus japonicus HOM05D002222 ORTHO05D002354 4.4e-08 62.0 181 32.0
Hund25651 Selenicereus undatus HOM05D002222 ORTHO05D002354 5.8e-08 61.6 131 38.2
Sabra18G0036200 Salix brachista HOM05D002222 ORTHO05D002354 7.6e-08 61.2 212 31.1
Prupe.1G464000 Prunus persica HOM05D002222 ORTHO05D002354 9.9e-08 60.8 88 45.5
Ciclev10010486m.g Citrus clementina HOM05D002222 ORTHO05D002354 1.7e-07 60.1 129 38.8
CsaV3_3G046840 Cucumis sativus L. HOM05D002222 ORTHO05D002354 1.7e-07 60.1 103 38.8
AagrBONN_evm.TU.Sc2ySwM_362.896 Anthoceros agrestis HOM05D002222 ORTHO05D002354 2.9e-07 59.3 95 42.1
Cpa.g.sc205.15 Carica papaya HOM05D002222 ORTHO05D002354 2.9e-07 59.3 51 58.8
Zm00001eb116420 Zea mays HOM05D002222 ORTHO05D002354 2.9e-07 59.3 75 44.0
FAN27G2803 Fragaria x ananassa HOM05D002222 ORTHO05D002354 4.9e-07 58.5 66 47.0
Atru.chr7.2306 Acer truncatum HOM05D002222 ORTHO05D002354 8.4e-07 57.8 192 30.2
CsaV3_1G002000 Cucumis sativus L. HOM05D002222 ORTHO05D002354 8.4e-07 57.8 64 48.4
Lsat_1_v5_gn_1_49141 Lactuca sativa HOM05D002222 ORTHO05D002354 8.4e-07 57.8 89 38.2
MBI01_g11795_MAGBIO Magnolia biondii HOM05D002222 ORTHO05D002354 8.4e-07 57.8 108 38.9
QL12p030938 Quercus lobata HOM05D002222 ORTHO05D002354 8.4e-07 57.8 74 40.5
COL.COLO4_18715 Corchorus olitorius HOM05D002222 ORTHO05D002354 1.1e-06 57.4 128 36.7
HanXRQChr11g0351601 Helianthus annuus HOM05D002222 ORTHO05D002354 1.4e-06 57.0 128 34.4
ClCG06G016510 Citrullus lanatus HOM05D002222 ORTHO05D002354 1.9e-06 56.6 64 46.9
FAN24G0549 Fragaria x ananassa HOM05D002222 ORTHO05D002354 2.4e-06 56.2 114 36.8
Cfa019021 Carpinus fangiana HOM05D002222 ORTHO05D002354 4.2e-06 55.5 64 46.9
Sed0027457 Sechium edule HOM05D002222 ORTHO05D002354 4.2e-06 55.5 73 43.8
TPR.G12315 Trifolium pratense HOM05D002222 ORTHO05D002354 4.2e-06 55.5 97 38.1
TPR.G38385 Trifolium pratense HOM05D002222 ORTHO05D002354 4.2e-06 55.5 72 44.4
Sabra06G0191700 Salix brachista HOM05D002222 ORTHO05D002354 5.4e-06 55.1 132 34.8
TAR374G1029 Trochodendron aralioides HOM05D002222 ORTHO05D002354 5.4e-06 55.1 154 33.8
VMungo1215G2495 Vigna mungo HOM05D002222 ORTHO05D002354 5.4e-06 55.1 72 45.8
Haze_07398 Corylus avellana HOM05D002222 ORTHO05D002354 7.1e-06 54.7 64 46.9
A09p59590 Brassica napus HOM05D002222 ORTHO05D002354 9.2e-06 54.3 148 35.8
CANSAT25G3233 Cannabis sativa HOM05D002222 ORTHO05D002354 9.2e-06 54.3 195 27.7
CiPaw.08G017000 Carya illinoinensis HOM05D002222 ORTHO05D002354 9.2e-06 54.3 203 30.0
Dinv30237 Davidia involucrata HOM05D002222 ORTHO05D002354 9.2e-06 54.3 124 37.1
Psat4g054320 Pisum sativum HOM05D002222 ORTHO05D002354 9.2e-06 54.3 72 41.7
Psat5g026320 Pisum sativum HOM05D002222 ORTHO05D002354 9.2e-06 54.3 181 29.8
Potri.006G244800 Populus trichocarpa HOM05D002222 ORTHO05D002354 9.2e-06 54.3 130 35.4


User provided reference genes

Program Settings