Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p34120 Brassica napus HOM05D004231 ORTHO05D004814 3.8e-197 691.4 374 100.0
BraA06t26345Z Brassica rapa HOM05D004231 ORTHO05D004814 5.1e-194 681.0 372 98.7
BcaC01g02941 Brassica carinata HOM05D004231 ORTHO05D004814 1.0e-186 656.8 374 96.0
C03p58080 Brassica napus HOM05D004231 ORTHO05D004814 2.3e-186 655.6 374 96.0
BolC3t18081H Brassica oleracea HOM05D004231 ORTHO05D004814 2.3e-186 655.6 374 96.0
BcaB03g16474 Brassica carinata HOM05D004231 ORTHO05D004814 3.2e-180 635.2 374 92.5
A07p03760 Brassica napus HOM05D004231 ORTHO05D004814 2.7e-179 632.1 371 91.9
BraA07t28164Z Brassica rapa HOM05D004231 ORTHO05D004814 2.7e-179 632.1 371 91.9
Sp3g30610 Schrenkiella parvula HOM05D004231 ORTHO05D004814 2.7e-179 632.1 371 93.0
C07p06030 Brassica napus HOM05D004231 ORTHO05D004814 3.5e-179 631.7 371 91.9
Thhalv10022738m.g Eutrema salsugineum HOM05D004231 ORTHO05D004814 5.1e-178 627.9 371 92.5
BcaB03g16478 Brassica carinata HOM05D004231 ORTHO05D004814 1.5e-177 626.3 371 91.1
BolC7t41016H Brassica oleracea HOM05D004231 ORTHO05D004814 1.5e-177 626.3 371 91.1
BcaB07g31737 Brassica carinata HOM05D004231 ORTHO05D004814 5.7e-177 624.4 371 91.6
C09p13290 Brassica napus HOM05D004231 ORTHO05D004814 5.7e-177 624.4 371 91.6
BolC9t54222H Brassica oleracea HOM05D004231 ORTHO05D004814 1.3e-176 623.2 371 91.4
A09p11260 Brassica napus HOM05D004231 ORTHO05D004814 6.3e-176 620.9 371 90.8
BcaC04g22982 Brassica carinata HOM05D004231 ORTHO05D004814 1.1e-175 620.2 371 91.1
AL3G50130 Arabidopsis lyrata HOM05D004231 ORTHO05D004814 1.4e-175 619.8 371 91.1
BraA09t36767Z Brassica rapa HOM05D004231 ORTHO05D004814 1.4e-175 619.8 371 90.6
Carub.0003s3121 Capsella rubella HOM05D004231 ORTHO05D004814 2.6e-174 615.5 371 91.1
AT2G17265 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 4.5e-174 614.8 371 90.0
CARHR293610 Cardamine hirsuta HOM05D004231 ORTHO05D004814 7.9e-171 604.0 371 88.7
Aa31LG2G14870 Aethionema arabicum HOM05D004231 ORTHO05D004814 2.6e-161 572.4 368 85.3
Carub.0007s0500 Capsella rubella HOM05D004231 ORTHO05D004814 6.3e-152 541.2 371 80.9
BcaB03g16477 Brassica carinata HOM05D004231 ORTHO05D004814 6.1e-139 498.0 296 90.9
Duzib052G0175 Durio zibethinus HOM05D004231 ORTHO05D004814 1.3e-136 490.3 361 75.1
Ciclev10028700m.g Citrus clementina HOM05D004231 ORTHO05D004814 1.4e-135 486.9 367 73.0
BcaC06g36249 Brassica carinata HOM05D004231 ORTHO05D004814 1.8e-135 486.5 317 86.1
QL05p043527 Quercus lobata HOM05D004231 ORTHO05D004814 1.8e-135 486.5 351 77.5
Sabra04G0139300 Salix brachista HOM05D004231 ORTHO05D004814 3.1e-135 485.7 370 73.0
Lsat_1_v5_gn_8_121420 Lactuca sativa HOM05D004231 ORTHO05D004814 9.1e-135 484.2 344 78.2
Potri.009G168400 Populus trichocarpa HOM05D004231 ORTHO05D004814 3.5e-134 482.3 368 73.4
Thecc.02G146400 Theobroma cacao HOM05D004231 ORTHO05D004814 7.7e-134 481.1 374 71.4
Potri.004G207000 Populus trichocarpa HOM05D004231 ORTHO05D004814 1.3e-133 480.3 370 72.7
HanXRQChr16g0515121 Helianthus annuus HOM05D004231 ORTHO05D004814 5.0e-133 478.4 344 77.9
Manes.01G017200 Manihot esculenta HOM05D004231 ORTHO05D004814 1.1e-132 477.2 369 73.7
Solyc04g008760.3 Solanum lycopersicum HOM05D004231 ORTHO05D004814 7.2e-132 474.6 336 75.9
FvH4_2g16830 Fragaria vesca HOM05D004231 ORTHO05D004814 1.6e-131 473.4 355 75.5
Sopen04g003940 Solanum pennellii HOM05D004231 ORTHO05D004814 1.6e-131 473.4 334 76.0
Cfa005374 Carpinus fangiana HOM05D004231 ORTHO05D004814 2.1e-131 473.0 336 78.3
CSS0007201 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 2.8e-131 472.6 378 71.2
MD10G1142000 Malus domestica HOM05D004231 ORTHO05D004814 2.8e-131 472.6 355 74.9
PGSC0003DMG400025309 Solanum tuberosum HOM05D004231 ORTHO05D004814 3.6e-131 472.2 334 75.7
TWI75G1214 Tripterygium wilfordii HOM05D004231 ORTHO05D004814 4.7e-131 471.9 372 70.7
SGA_v2.0_scaffold36G14389 Striga asiatica HOM05D004231 ORTHO05D004814 8.0e-131 471.1 363 70.8
Migut.N00847 Erythranthe guttata HOM05D004231 ORTHO05D004814 1.0e-130 470.7 365 70.4
FAN15G0610 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.4e-130 470.3 354 74.9
CAN.G5871.1 Capsicum annuum HOM05D004231 ORTHO05D004814 2.3e-130 469.5 358 71.8
PGR042G2635 Punica granatum HOM05D004231 ORTHO05D004814 2.3e-130 469.5 375 70.1
FAN24G0296 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.2e-129 467.2 352 75.0
RcHm_v2.0_Chr6g0280961 Rosa chinensis HOM05D004231 ORTHO05D004814 2.0e-129 466.5 355 74.9
CiPaw.06G115200 Carya illinoinensis HOM05D004231 ORTHO05D004814 2.6e-129 466.1 363 73.6
Hma1.2p1_0652F.1_g195880 Hydrangea macrophylla HOM05D004231 ORTHO05D004814 2.6e-129 466.1 334 76.6
MSTRG.25000 Avicennia marina HOM05D004231 ORTHO05D004814 4.4e-129 465.3 366 70.8
Actinidia17992 Actinidia chinensis HOM05D004231 ORTHO05D004814 9.8e-129 464.2 365 72.9
Oeu005953.1 Olea europaea HOM05D004231 ORTHO05D004814 1.3e-128 463.8 376 69.4
Dinv14175 Davidia involucrata HOM05D004231 ORTHO05D004814 1.7e-128 463.4 355 73.8
FAN27G2171 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.7e-128 463.4 352 73.9
Nitab4.5_0000783g0100 Nicotiana tabacum HOM05D004231 ORTHO05D004814 2.8e-128 462.6 335 75.8
ClCG02G003360 Citrullus lanatus HOM05D004231 ORTHO05D004814 4.9e-128 461.8 357 72.3
ECA233G1094 Erigeron canadensis HOM05D004231 ORTHO05D004814 4.9e-128 461.8 327 77.7
Prupe.8G180500 Prunus persica HOM05D004231 ORTHO05D004814 8.3e-128 461.1 358 72.9
CANSAT25G0301 Cannabis sativa HOM05D004231 ORTHO05D004814 2.4e-127 459.5 353 72.5
MELO3C015708.2 Cucumis melo HOM05D004231 ORTHO05D004814 2.4e-127 459.5 357 72.0
CsaV3_7G001970 Cucumis sativus L. HOM05D004231 ORTHO05D004814 2.4e-127 459.5 357 72.0
Sc08g0002160 Simmondsia chinensis HOM05D004231 ORTHO05D004814 2.4e-127 459.5 355 72.7
SalBow7G0905 Salvia bowleyana HOM05D004231 ORTHO05D004814 3.1e-127 459.1 328 75.0
Peaxi162Scf00362g00110 Petunia axillaris HOM05D004231 ORTHO05D004814 5.4e-127 458.4 322 76.7
SGA_v2.0_scaffold172G39001 Striga asiatica HOM05D004231 ORTHO05D004814 7.0e-127 458.0 363 69.7
Sed0021373 Sechium edule HOM05D004231 ORTHO05D004814 5.9e-126 454.9 362 71.8
Nn7g36283 Nelumbo nucifera HOM05D004231 ORTHO05D004814 1.0e-125 454.1 347 73.2
Ca_10777_v3 Cicer arietinum L. HOM05D004231 ORTHO05D004814 1.3e-125 453.8 370 69.2
LjContig00081g0001175 Lotus japonicus HOM05D004231 ORTHO05D004814 1.3e-125 453.8 323 77.1
Sopen01g054320 Solanum pennellii HOM05D004231 ORTHO05D004814 1.3e-125 453.8 322 75.8
Lalb_Chr12g0208621 Lupinus albus HOM05D004231 ORTHO05D004814 5.0e-125 451.8 371 69.3
CSS0030147 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 6.6e-125 451.4 363 71.1
CDE05G1267 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 6.6e-125 451.4 339 73.2
Cc11_g00240 Coffea canephora HOM05D004231 ORTHO05D004814 1.1e-124 450.7 355 71.3
Aqoxy1G01703 Aquilegia oxysepala HOM05D004231 ORTHO05D004814 1.9e-124 449.9 334 73.7
CDE05G2018 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 2.5e-124 449.5 341 72.7
DCAR_006270 Daucus carota HOM05D004231 ORTHO05D004814 2.5e-124 449.5 330 74.5
RhsimUnG0022900 Rhododendron simsii HOM05D004231 ORTHO05D004814 3.3e-124 449.1 379 67.8
PGSC0003DMG400014663 Solanum tuberosum HOM05D000109 ORTHO05D004814 3.3e-124 449.1 322 74.8
Lsat_1_v5_gn_4_71321 Lactuca sativa HOM05D004231 ORTHO05D004814 5.6e-124 448.4 349 66.8
Peaxi162Scf00329g00312 Petunia axillaris HOM05D004231 ORTHO05D004814 5.6e-124 448.4 356 69.9
ECA236G1252 Erigeron canadensis HOM05D000103 ORTHO05D000049 7.3e-124 448.0 365 69.6
Sed0027682 Sechium edule HOM05D004231 ORTHO05D004814 1.2e-123 447.2 371 69.8
Nn2g15251 Nelumbo nucifera HOM05D004231 ORTHO05D004814 1.6e-123 446.8 365 71.0
CiPaw.05G093400 Carya illinoinensis HOM05D004231 ORTHO05D004814 4.7e-123 445.3 360 70.6
PSO675G1855 Papaver somniferum HOM05D004231 ORTHO05D004814 6.1e-123 444.9 378 67.7
EL10Ac9g21537 Beta vulgaris HOM05D004231 ORTHO05D004814 1.0e-122 444.1 371 69.3
PSO541G6356 Papaver somniferum HOM05D004231 ORTHO05D004814 1.0e-122 444.1 378 67.7
Lalb_Chr07g0189301 Lupinus albus HOM05D004231 ORTHO05D004814 1.4e-122 443.7 331 72.5
PSO782G1111 Papaver somniferum HOM05D004231 ORTHO05D004814 1.4e-122 443.7 348 71.0
Nitab4.5_0000129g0030 Nicotiana tabacum HOM05D004231 ORTHO05D004814 1.8e-122 443.4 311 76.2
arahy.Tifrunner.gnm1.ann1.9M6UE0 Arachis hypogaea HOM05D004231 ORTHO05D004814 2.3e-122 443.0 353 71.7
arahy.Tifrunner.gnm1.ann1.3XUX0K Arachis hypogaea HOM05D004231 ORTHO05D004814 3.0e-122 442.6 349 71.9
PSO063G5124 Papaver somniferum HOM05D004231 ORTHO05D004814 4.0e-122 442.2 348 71.0
TPR.G5084 Trifolium pratense HOM05D004231 ORTHO05D004814 6.8e-122 441.4 382 65.7
TPR.G18636 Trifolium pratense HOM05D004231 ORTHO05D004814 8.9e-122 441.0 326 73.0
unitig_0.g2083 Utricularia gibba HOM05D004231 ORTHO05D004814 8.9e-122 441.0 329 72.6
Medtr5g099180 Medicago truncatula HOM05D004231 ORTHO05D004814 1.5e-121 440.3 382 67.0
Nitab4.5_0008730g0040 Nicotiana tabacum HOM05D004231 ORTHO05D004814 1.5e-121 440.3 312 75.0
Ah.01g009950 Amaranthus hybridus HOM05D004231 ORTHO05D004814 2.0e-121 439.9 375 67.5
Phvul.008G292300 Phaseolus vulgaris HOM05D004231 ORTHO05D004814 2.6e-121 439.5 373 68.9
Glyma.14G001000 Glycine max HOM05D004231 ORTHO05D004814 4.4e-121 438.7 321 74.8
Gohir.A03G170800 Gossypium hirsutum HOM05D004231 ORTHO05D004814 2.9e-120 436.0 374 66.6
AUR62013177 Chenopodium quinoa HOM05D004231 ORTHO05D004814 6.4e-120 434.9 375 68.5
Gorai.005G216700 Gossypium raimondii HOM05D004231 ORTHO05D004814 2.4e-119 433.0 374 66.0
Gohir.D02G193900 Gossypium hirsutum HOM05D004231 ORTHO05D004814 3.2e-119 432.6 374 66.0
CARHR243620 Cardamine hirsuta HOM05D004231 ORTHO05D004814 4.1e-119 432.2 292 82.5
Psat2g000800 Pisum sativum HOM05D004231 ORTHO05D004814 2.0e-118 429.9 362 67.4
MBI18_g17319_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 1.7e-117 426.8 375 65.6
SHI25239 Sapria himalayana HOM05D004231 ORTHO05D004814 3.6e-115 419.1 349 67.6
Psat2g000680 Pisum sativum HOM05D004231 ORTHO05D004814 1.4e-114 417.2 377 65.5
HPP92_007738 Vanilla planifolia HOM05D004231 ORTHO05D004814 1.7e-112 410.2 380 63.7
ATR0177G062 Amborella trichopoda HOM05D004231 ORTHO05D004814 3.7e-112 409.1 323 69.7
Cpa.g.sc60.14 Carica papaya HOM05D004231 ORTHO05D004814 4.6e-110 402.1 371 65.0
AUR62010176 Chenopodium quinoa HOM05D004231 ORTHO05D004814 3.1e-106 389.4 375 60.5
GSVIVG01023624001 Vitis vinifera HOM05D004231 ORTHO05D004814 5.2e-106 388.7 376 63.3
Pp3c5_14900 Physcomitrium patens HOM05D004231 ORTHO05D004814 3.4e-105 386.0 329 65.3
Os02g0831800 Oryza sativa ssp. japonica HOM05D004231 ORTHO05D004814 1.7e-104 383.6 344 63.4
THA.LOC104807405 Tarenaya hassleriana HOM05D004231 ORTHO05D004814 2.9e-104 382.9 243 87.2
Mapoly0173s0009 Marchantia polymorpha HOM05D004231 ORTHO05D004814 1.2e-102 377.5 326 64.1
Lj9P408T30 Lonicera japonica HOM05D004231 ORTHO05D004814 7.6e-97 358.2 247 80.2
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 2.9e-96 356.3 390 55.1
SMO351G0181 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 2.4e-95 353.2 330 61.5
COL.COLO4_34312 Corchorus olitorius HOM05D000109 ORTHO05D000520 1.2e-86 324.3 335 57.3
MBI10_g41732_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 2.1e-86 323.6 297 59.3
Atru.chr5.3561 Acer truncatum HOM05D004231 ORTHO05D004814 4.8e-83 312.4 206 76.2
Cre02.g082250 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 3.4e-81 306.2 337 54.0
MBI15_g18193_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 1.2e-78 297.7 330 54.8
ATR0810G109 Amborella trichopoda HOM05D004231 ORTHO05D004814 2.5e-76 290.0 324 55.9
SEGI_38009 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 9.9e-73 278.1 242 61.6
TAR625G1260 Trochodendron aralioides HOM05D004231 ORTHO05D004814 3.8e-56 223.0 209 59.3
Cre02.g082200 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 3.0e-53 213.4 261 49.4
Atru.chr5.3560 Acer truncatum HOM05D004231 ORTHO05D004814 2.3e-45 187.2 143 66.4
SMO231G0001 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 6.7e-45 185.7 165 61.2
Dinv20762 Davidia involucrata HOM05D004231 ORTHO05D004814 2.4e-42 177.2 130 71.5
Sabra09G0130700 Salix brachista HOM05D004231 ORTHO05D004814 3.0e-37 160.2 164 59.1
VMungo0331G0717 Vigna mungo HOM05D004231 ORTHO05D004814 5.0e-32 142.9 103 72.8
BcaB08g34718 Brassica carinata HOM05D004231 ORTHO05D004814 6.1e-30 136.0 78 91.0
TAR625G0010 Trochodendron aralioides HOM05D004231 ORTHO05D004814 2.2e-27 127.5 89 68.5
VMungo0647G1050 Vigna mungo HOM05D004231 ORTHO05D004814 2.2e-27 127.5 95 71.6
BcaB08g34717 Brassica carinata HOM05D004231 ORTHO05D004814 4.8e-27 126.3 68 92.6
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 1.3e-24 118.2 110 54.5
Actinidia26328 Actinidia chinensis HOM05D004231 ORTHO05D004814 5.0e-24 116.3 128 50.0
arahy.Tifrunner.gnm1.ann1.H05BEB Arachis hypogaea HOM05D004231 ORTHO05D004814 1.6e-22 111.3 95 62.1
BcaC06g34170 Brassica carinata HOM05D004231 ORTHO05D004814 3.0e-21 107.1 66 83.3
QL03p013131 Quercus lobata HOM05D004231 ORTHO05D004814 5.7e-20 102.8 79 65.8
QL06p003747 Quercus lobata HOM05D003236 ORTHO05D003620 9.8e-20 102.1 114 51.8
QL08p042586 Quercus lobata HOM05D004231 ORTHO05D004814 2.4e-18 97.4 87 59.8
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.0e-16 92.0 284 30.3
MCO14G367 Micromonas commoda HOM05D004231 ORTHO05D004814 2.9e-16 90.5 312 31.4
PRCOL_00006973 Prasinoderma coloniale HOM05D004231 ORTHO05D004814 6.6e-16 89.4 310 31.0
AT4G35295 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 2.3e-13 80.9 63 69.8
Lsat_1_v5_gn_2_1161 Lactuca sativa HOM05D004231 ORTHO05D004814 6.3e-11 72.8 59 62.7
BolC7t43738H Brassica oleracea HOM05D004231 ORTHO05D004814 1.1e-10 72.0 69 62.3
TAR625G0853 Trochodendron aralioides HOM05D000369 ORTHO05D000253 1.1e-10 72.0 177 35.0
FAN07G1153 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.4e-10 71.6 49 69.4
C07p31950 Brassica napus HOM05D004231 ORTHO05D004814 2.4e-10 70.9 73 58.9
FAN15G0284 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.4e-10 70.9 49 69.4
SEGI_37911 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 3.2e-10 70.5 51 66.7
Cre02.g082150 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 1.2e-09 68.6 67 53.7
FAN05G5401 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.6e-09 68.2 50 66.0
FAN05G3570 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.0e-08 65.5 49 65.3
FvH4_3g29830 Fragaria vesca HOM05D004126 ORTHO05D004818 1.7e-08 64.7 44 70.5
BcaB08g35109 Brassica carinata HOM05D004231 ORTHO05D004814 2.3e-08 64.3 43 74.4
FAN25G3338 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.9e-08 63.9 50 62.0
FAN04G2646 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.5e-07 61.6 80 48.8
Ah.03g140200 Amaranthus hybridus HOM05D004231 ORTHO05D004814 2.1e-06 57.8 67 70.1
FAN23G0549 Fragaria x ananassa HOM05D004231 ORTHO05D004814 8.0e-06 55.8 75 49.3
FAN23G1162 Fragaria x ananassa HOM05D004231 ORTHO05D004814 8.0e-06 55.8 75 49.3


User provided reference genes

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