Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p34090 Brassica napus HOM05D000125 ORTHO05D024564 1.7e-44 182.2 84 100.0
C03p58130 Brassica napus HOM05D000125 ORTHO05D024564 1.8e-43 178.7 83 97.6
BolC3t18084H Brassica oleracea HOM05D000125 ORTHO05D024564 1.8e-43 178.7 83 97.6
BcaC01g02937 Brassica carinata HOM05D000125 ORTHO05D000120 1.0e-41 172.9 80 96.2
AT3G13590 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.0e-25 118.2 84 61.9
BcaC01g01588 Brassica carinata HOM05D000125 ORTHO05D000120 6.6e-25 117.1 82 58.5
C03p74360 Brassica napus HOM05D000125 ORTHO05D000120 7.3e-24 113.6 82 57.3
CARHR088270 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.6e-23 112.5 83 59.0
Carub.0007s3012 Capsella rubella HOM05D000125 ORTHO05D000120 2.1e-23 112.1 82 59.8
CARHR088280 Cardamine hirsuta HOM05D000125 ORTHO05D000120 8.1e-23 110.2 83 59.0
A03p36980 Brassica napus HOM05D000125 ORTHO05D000120 4.0e-22 107.8 83 56.6
A05p35820 Brassica napus HOM05D000125 ORTHO05D000120 1.2e-21 106.3 79 57.0
BraA05t22387Z Brassica rapa HOM05D000125 ORTHO05D000120 1.2e-21 106.3 79 57.0
CARHR088290 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.2e-21 106.3 81 60.5
C03p44750 Brassica napus HOM05D000125 ORTHO05D000120 4.4e-21 104.4 83 55.4
BolC3t16738H Brassica oleracea HOM05D000125 ORTHO05D000120 4.4e-21 104.4 83 55.4
BcaC01g04136 Brassica carinata HOM05D000125 ORTHO05D000120 5.8e-21 104.0 83 55.4
BraA03t12860Z Brassica rapa HOM05D000125 ORTHO05D000120 5.8e-21 104.0 83 55.4
BcaC01g06942 Brassica carinata HOM05D000125 ORTHO05D000120 9.9e-21 103.2 84 53.6
Thhalv10028040m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.3e-20 102.8 80 56.2
A08p26190 Brassica napus HOM05D000125 ORTHO05D000120 2.9e-20 101.7 79 50.6
BraA08t34570Z Brassica rapa HOM05D000125 ORTHO05D000120 3.7e-20 101.3 79 50.6
BcaB06g25452 Brassica carinata HOM05D000125 ORTHO05D000120 4.9e-20 100.9 79 57.0
C03p74310 Brassica napus HOM05D000125 ORTHO05D000120 1.1e-19 99.8 79 51.9
BcaB06g25453 Brassica carinata HOM05D000125 ORTHO05D000120 1.9e-19 99.0 79 54.4
A05p35840 Brassica napus HOM05D000125 ORTHO05D000120 1.9e-19 99.0 81 54.3
BraA05t22389Z Brassica rapa HOM05D000125 ORTHO05D000120 1.9e-19 99.0 81 54.3
BcaC05g29171 Brassica carinata HOM05D000125 ORTHO05D000120 2.4e-19 98.6 82 52.4
C05p54290 Brassica napus HOM05D000125 ORTHO05D000120 2.4e-19 98.6 82 52.4
BolC5t34096H Brassica oleracea HOM05D000125 ORTHO05D000120 2.4e-19 98.6 82 52.4
A05p35830 Brassica napus HOM05D000125 ORTHO05D000120 7.1e-19 97.1 79 55.7
Aa31LG8G780 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.2e-18 96.3 80 51.2
BraA05t22392Z Brassica rapa HOM05D000125 ORTHO05D000120 1.2e-18 96.3 82 52.4
A05p35860 Brassica napus HOM05D000125 ORTHO05D000120 2.7e-18 95.1 82 51.2
Thhalv10018463m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.7e-17 92.4 78 53.8
BcaB06g25454 Brassica carinata HOM05D000125 ORTHO05D000120 6.6e-17 90.5 80 50.0
BraA06t26342Z Brassica rapa HOM05D000125 ORTHO05D024564 8.6e-17 90.1 42 95.2
BcaC01g01599 Brassica carinata HOM05D000125 ORTHO05D000120 1.6e-15 85.9 79 44.3
BolC1t01265H Brassica oleracea HOM05D000125 ORTHO05D000120 2.6e-13 78.6 82 37.8
Sp7g01410 Schrenkiella parvula HOM05D000125 ORTHO05D000120 7.6e-13 77.0 83 38.6
BolC3t19687H Brassica oleracea HOM05D000125 ORTHO05D000120 4.9e-12 74.3 54 50.0
Aa31LG4G17400 Aethionema arabicum HOM05D000125 ORTHO05D000120 6.4e-12 73.9 79 43.0
Aa31LG2G5070 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.1e-11 73.2 81 40.7
CARHR148610 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.4e-11 72.8 70 45.7
CARHR211050 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.2e-10 69.7 78 39.7
Thhalv10027671m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.2e-10 69.7 83 37.3
THA.LOC104812543 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 2.1e-10 68.9 79 39.2
BcaNung05586 Brassica carinata HOM05D000125 ORTHO05D000120 3.5e-10 68.2 76 39.5
C06p35520 Brassica napus HOM05D000125 ORTHO05D000120 3.5e-10 68.2 78 41.0
BolC6t38674H Brassica oleracea HOM05D000125 ORTHO05D000120 3.5e-10 68.2 78 41.0
THA.LOC104803981 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 3.5e-10 68.2 76 40.8
Aa31LG4G17710 Aethionema arabicum HOM05D000125 ORTHO05D000120 4.6e-10 67.8 66 47.0
AT3G21210 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.6e-10 67.8 80 33.8
CARHR269170 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.0e-09 66.6 92 34.8
Thhalv10000071m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.0e-09 66.6 77 40.3
Thhalv10012244m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.3e-09 66.2 63 41.3
BcaC05g28264 Brassica carinata HOM05D000125 ORTHO05D000120 1.7e-09 65.9 77 36.4
C05p42570 Brassica napus HOM05D000125 ORTHO05D000120 1.7e-09 65.9 77 36.4
BcaB04g20361 Brassica carinata HOM05D000125 ORTHO05D000120 2.3e-09 65.5 76 38.2
Aa31LG4G17680 Aethionema arabicum HOM05D000125 ORTHO05D000120 3.9e-09 64.7 74 39.2
AT2G13895 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.9e-09 64.7 83 37.3
AT5G43030 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.9e-09 64.7 80 37.5
THA.LOC104819099 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 3.9e-09 64.7 79 36.7
Aa31LG4G13580 Aethionema arabicum HOM05D000125 ORTHO05D000120 5.1e-09 64.3 77 37.7
AL5G16600 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 5.1e-09 64.3 74 41.9
AT1G55420 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 5.1e-09 64.3 80 41.2
Sp2g06340 Schrenkiella parvula HOM05D000125 ORTHO05D000120 5.1e-09 64.3 77 33.8
Aa31LG3G6160 Aethionema arabicum HOM05D000125 ORTHO05D000120 6.6e-09 63.9 70 41.4
Aa31LG4G17750 Aethionema arabicum HOM05D000125 ORTHO05D000120 6.6e-09 63.9 62 40.3
BcaB02g10340 Brassica carinata HOM05D000125 ORTHO05D000120 6.6e-09 63.9 68 39.7
BcaB07g29750 Brassica carinata HOM05D000125 ORTHO05D000120 6.6e-09 63.9 68 39.7
AT5G43040 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 8.7e-09 63.5 80 36.2
Sp4g05840 Schrenkiella parvula HOM05D000125 ORTHO05D000120 8.7e-09 63.5 81 39.5
SpUn0059_0030 Schrenkiella parvula HOM05D000125 ORTHO05D000120 8.7e-09 63.5 81 39.5
Sp6g05515 Schrenkiella parvula HOM05D000125 ORTHO05D000120 1.1e-08 63.2 75 36.0
AL5G15330 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.5e-08 62.8 91 36.3
AT3G26550 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.5e-08 62.8 91 35.2
Carub.0005s0454 Capsella rubella HOM05D000125 ORTHO05D000120 1.9e-08 62.4 92 38.0
Aa31LG11G7430 Aethionema arabicum HOM05D000125 ORTHO05D000120 2.5e-08 62.0 81 38.3
Carub.0002s0320 Capsella rubella HOM05D000125 ORTHO05D000120 2.5e-08 62.0 77 35.1
CARHR221510 Cardamine hirsuta HOM05D000125 ORTHO05D000120 2.5e-08 62.0 77 35.1
CARHR290650 Cardamine hirsuta HOM05D000125 ORTHO05D000120 3.3e-08 61.6 77 37.7
THA.LOC104820140 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 5.6e-08 60.8 77 40.3
AT1G53340 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 7.3e-08 60.5 84 35.7
BcaC02g11666 Brassica carinata HOM05D000125 ORTHO05D000120 7.3e-08 60.5 77 37.7
A02p04590 Brassica napus HOM05D000005 ORTHO05D012291 7.3e-08 60.5 71 36.6
A02p43390 Brassica napus HOM05D000125 ORTHO05D000120 7.3e-08 60.5 61 41.0
C04p12600 Brassica napus HOM05D000125 ORTHO05D000120 7.3e-08 60.5 77 37.7
BraA02t05419Z Brassica rapa HOM05D000125 ORTHO05D012291 7.3e-08 60.5 71 36.6
BraA02t09264Z Brassica rapa HOM05D000125 ORTHO05D000120 7.3e-08 60.5 61 41.0
Carub.0007s3278 Capsella rubella HOM05D000125 ORTHO05D000120 7.3e-08 60.5 81 38.3
BcaC05g27482 Brassica carinata HOM05D000125 ORTHO05D000120 9.6e-08 60.1 78 37.2
C05p34470 Brassica napus HOM05D000125 ORTHO05D000120 9.6e-08 60.1 78 37.2
THA.LOC104802891 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 9.6e-08 60.1 78 34.6
AL7G46380 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.2e-07 59.7 78 35.9
A05p27480 Brassica napus HOM05D000125 ORTHO05D000120 1.2e-07 59.7 76 35.5
A07p34080 Brassica napus HOM05D000125 ORTHO05D000120 1.2e-07 59.7 76 38.2
BolC4t22906H Brassica oleracea HOM05D000125 ORTHO05D000120 1.2e-07 59.7 76 38.2
BraA05t21639Z Brassica rapa HOM05D000125 ORTHO05D000120 1.2e-07 59.7 76 35.5
BraA07t31034Z Brassica rapa HOM05D000125 ORTHO05D024564 1.2e-07 59.7 76 38.2
A05p10230 Brassica napus HOM05D000125 ORTHO05D000120 1.6e-07 59.3 81 35.8
BolC2t06859H Brassica oleracea HOM05D000125 ORTHO05D000120 1.6e-07 59.3 71 36.6
BraA05t19963Z Brassica rapa HOM05D000125 ORTHO05D000120 1.6e-07 59.3 81 35.8
BraA05t20963Z Brassica rapa HOM05D000125 ORTHO05D000120 1.6e-07 59.3 77 36.4
Aa31LG4G17700 Aethionema arabicum HOM05D000125 ORTHO05D000120 2.1e-07 58.9 70 35.7
AT5G55770 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.1e-07 58.9 90 36.7
BcaC02g11655 Brassica carinata HOM05D000125 ORTHO05D000120 2.1e-07 58.9 81 37.0
C04p12680 Brassica napus HOM05D000125 ORTHO05D000120 2.1e-07 58.9 81 37.0
BolC4t22916H Brassica oleracea HOM05D000125 ORTHO05D000120 2.1e-07 58.9 81 37.0
Thhalv10012914m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 2.1e-07 58.9 91 33.0
A03p19620 Brassica napus HOM05D000125 ORTHO05D000120 2.8e-07 58.5 77 36.4
Carub.0004s2223 Capsella rubella HOM05D000125 ORTHO05D000120 2.8e-07 58.5 80 32.5
Thhalv10012961m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 2.8e-07 58.5 79 36.7
Thhalv10023939m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 2.8e-07 58.5 78 39.7
BraA03t11215Z Brassica rapa HOM05D000125 ORTHO05D000120 3.6e-07 58.2 77 35.1
Aa31LG4G17690 Aethionema arabicum HOM05D000125 ORTHO05D000120 4.7e-07 57.8 62 37.1
AL6G11580 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 6.2e-07 57.4 80 37.5
AT5G26190 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 6.2e-07 57.4 68 33.8
BcaC04g22836 Brassica carinata HOM05D000125 ORTHO05D000120 6.2e-07 57.4 78 34.6
C03p22880 Brassica napus HOM05D000125 ORTHO05D000120 6.2e-07 57.4 77 35.1
C09p14810 Brassica napus HOM05D000125 ORTHO05D000120 6.2e-07 57.4 78 34.6
CARHR097090 Cardamine hirsuta HOM05D000125 ORTHO05D000120 6.2e-07 57.4 76 34.2
AT2G02620 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.1e-06 56.6 56 42.9
BcaB03g15188 Brassica carinata HOM05D000125 ORTHO05D000120 1.1e-06 56.6 76 36.8
BcaC01g01519 Brassica carinata HOM05D000125 ORTHO05D000120 1.1e-06 56.6 77 32.5
BolC3t21581H Brassica oleracea HOM05D000125 ORTHO05D000120 1.1e-06 56.6 77 32.5
CARHR159840 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.1e-06 56.6 76 35.5
Aa31LG4G17730 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.4e-06 56.2 70 38.6
BcaB04g20359 Brassica carinata HOM05D000125 ORTHO05D000120 1.4e-06 56.2 68 38.2
BcaNung05074 Brassica carinata HOM05D000125 ORTHO05D000120 1.4e-06 56.2 75 33.3
C02p09510 Brassica napus HOM05D000005 ORTHO05D012291 1.4e-06 56.2 71 35.2
Thhalv10000441m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.4e-06 56.2 77 37.7
AL2G14230 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.8e-06 55.8 78 33.3
AL5G16900 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 2.4e-06 55.5 77 35.1
Carub.0006s0035 Capsella rubella HOM05D000125 ORTHO05D000120 2.4e-06 55.5 75 37.3
BcaB04g20357 Brassica carinata HOM05D000125 ORTHO05D000120 3.1e-06 55.1 62 37.1
C06p42720 Brassica napus HOM05D000125 ORTHO05D000120 3.1e-06 55.1 76 35.5
C07p02230 Brassica napus HOM05D000125 ORTHO05D000120 3.1e-06 55.1 78 37.2
BolC6t39166H Brassica oleracea HOM05D000125 ORTHO05D000120 3.1e-06 55.1 76 35.5
AT1G34480 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.0e-06 54.7 78 32.1
AT5G37620 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.0e-06 54.7 78 30.8
CARHR209970 Cardamine hirsuta HOM05D000125 ORTHO05D000120 4.0e-06 54.7 83 33.7
CARHR269100 Cardamine hirsuta HOM05D000125 ORTHO05D000120 4.0e-06 54.7 86 33.7
BcaC05g29710 Brassica carinata HOM05D000125 ORTHO05D000120 5.2e-06 54.3 80 32.5
Sp6g07250 Schrenkiella parvula HOM05D000125 ORTHO05D000120 5.2e-06 54.3 74 33.8
C06p42760 Brassica napus HOM05D000125 ORTHO05D000120 6.9e-06 53.9 76 35.5
CARHR145130 Cardamine hirsuta HOM05D000125 ORTHO05D000120 6.9e-06 53.9 69 36.2
CARHR217550 Cardamine hirsuta HOM05D000125 ORTHO05D000120 6.9e-06 53.9 82 34.1
CARHR045110 Cardamine hirsuta HOM05D000125 ORTHO05D000120 9.0e-06 53.5 78 34.6


User provided reference genes

Program Settings