Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 1.7e-82 309.3 156 100.0
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 1.7e-82 309.3 156 100.0
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 3.0e-79 298.5 156 96.2
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 3.0e-79 298.5 156 96.2
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 1.5e-78 296.2 156 95.5
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 1.4e-76 289.7 151 96.0
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 3.4e-75 285.0 157 92.4
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 1.7e-74 282.7 156 91.7
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 1.2e-72 276.6 156 91.0
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 1.3e-71 273.1 156 88.5
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 3.9e-71 271.6 158 89.9
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 3.3e-70 268.5 156 89.1
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 9.6e-70 266.9 151 85.4
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 3.4e-67 258.5 157 84.7
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 6.0e-64 247.7 156 82.1
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 6.6e-63 244.2 156 82.1
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 5.6e-62 241.1 151 81.5
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 3.0e-55 218.8 136 80.1
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 5.6e-46 188.0 159 64.8
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 7.4e-46 187.6 176 60.2
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 5.3e-36 154.8 77 92.2
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 2.6e-35 152.5 172 51.7
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 5.0e-34 148.3 171 52.6
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 2.5e-33 146.0 156 52.6
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 2.5e-33 146.0 170 51.8
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 4.2e-33 145.2 173 52.0
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 4.2e-33 145.2 167 53.9
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 5.5e-33 144.8 156 53.8
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 5.5e-33 144.8 145 55.2
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 7.2e-33 144.4 173 51.4
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 3.6e-32 142.1 167 50.3
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 6.1e-32 141.4 155 52.3
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 1.0e-31 140.6 170 50.0
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 8.8e-31 137.5 170 48.2
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 1.1e-30 137.1 138 52.9
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 2.5e-30 136.0 159 52.8
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 2.5e-30 136.0 159 52.8
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 5.7e-30 134.8 146 52.1
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 9.7e-30 134.0 176 45.5
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 1.3e-29 133.7 148 52.0
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 1.3e-29 133.7 175 49.7
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 2.2e-29 132.9 137 56.9
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 8.2e-29 131.0 120 54.2
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 2.4e-28 129.4 165 49.1
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 4.1e-28 128.6 164 49.4
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 6.9e-28 127.9 171 47.4
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 1.2e-27 127.1 131 52.7
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.2e-27 127.1 170 48.2
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 5.9e-27 124.8 126 51.6
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 7.7e-27 124.4 164 43.9
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 7.7e-27 124.4 140 50.7
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.0e-26 124.0 140 49.3
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 2.9e-26 122.5 155 49.0
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 2.9e-26 122.5 165 45.5
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 2.9e-26 122.5 139 51.1
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 8.5e-26 120.9 160 45.0
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 8.5e-26 120.9 160 45.0
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 1.1e-25 120.6 170 42.9
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 3.2e-25 119.0 138 47.8
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 3.2e-25 119.0 161 46.6
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 5.5e-25 118.2 139 48.9
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 1.6e-24 116.7 131 48.9
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 2.1e-24 116.3 178 44.9
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 3.6e-24 115.5 176 43.8
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 3.9e-23 112.1 120 47.5
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 1.5e-22 110.2 139 50.4
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 2.0e-22 109.8 119 50.4
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 2.6e-22 109.4 119 50.4
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 9.7e-22 107.5 133 48.1
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 1.3e-21 107.1 99 49.5
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 1.7e-21 106.7 121 45.5
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 1.7e-21 106.7 87 56.3
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 2.2e-21 106.3 176 42.0
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 2.8e-21 105.9 135 44.4
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 3.7e-21 105.5 159 42.1
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 6.3e-21 104.8 134 44.8
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 6.3e-21 104.8 92 53.3
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 1.4e-20 103.6 131 43.5
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 1.4e-20 103.6 107 52.3
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 2.4e-20 102.8 110 49.1
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 3.1e-20 102.4 160 42.5
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 3.1e-20 102.4 138 41.3
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 7.0e-20 101.3 130 45.4
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 2.0e-19 99.8 136 44.1
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 3.5e-19 99.0 134 41.8
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 4.5e-19 98.6 130 45.4
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 1.7e-18 96.7 104 51.0
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 7.2e-17 91.3 126 39.7
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 1.2e-16 90.5 119 42.9
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 1.8e-15 86.7 62 64.5
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 2.3e-15 86.3 88 46.6
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 5.7e-14 81.6 96 46.9
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 1.1e-12 77.4 94 51.1
ATR0346G001 Amborella trichopoda HOM05D003374 ORTHO05D009470 3.1e-12 75.9 61 57.4
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 7.0e-12 74.7 50 68.0
TPR.G25136 Trifolium pratense HOM05D000373 ORTHO05D001763 2.0e-11 73.2 100 42.0
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 7.7e-11 71.2 98 41.8
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 7.7e-11 71.2 98 41.8
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 6.5e-10 68.2 63 57.1
C04p48750 Brassica napus HOM05D026619 ORTHO05D040354 1.5e-06 57.0 32 78.1
BolC4t26461H Brassica oleracea HOM05D026619 ORTHO05D009470 1.5e-06 57.0 32 78.1
BolC4t26466H Brassica oleracea HOM05D026619 ORTHO05D040354 1.5e-06 57.0 32 78.1
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 4.4e-06 55.5 102 37.3
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 9.7e-06 54.3 66 40.9


User provided reference genes

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