Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p33150 Brassica napus HOM05D004230 ORTHO05D007976 2.3e-151 538.9 270 100.0
BolC5t30511H Brassica oleracea HOM05D004230 ORTHO05D007976 1.7e-135 486.1 257 95.3
BolC2t08696H Brassica oleracea HOM05D004230 ORTHO05D007976 2.7e-120 435.6 228 96.1
BraA06t26245Z Brassica rapa HOM05D004230 ORTHO05D007976 4.4e-115 418.3 208 98.6
C07p50550 Brassica napus HOM05D004230 ORTHO05D007976 7.8e-112 407.5 232 89.7
BolC3t17847H Brassica oleracea HOM05D004230 ORTHO05D007976 9.9e-107 390.6 224 88.4
BcaB06g26529 Brassica carinata HOM05D004230 ORTHO05D007976 3.8e-90 335.5 202 83.2
BcaC05g25838 Brassica carinata HOM05D004230 ORTHO05D007976 5.7e-78 295.0 152 96.1
BcaC03g15070 Brassica carinata HOM05D004230 ORTHO05D007976 9.7e-78 294.3 152 96.7
BcaC02g09042 Brassica carinata HOM05D004230 ORTHO05D007976 4.8e-77 292.0 152 94.7
C06p14020 Brassica napus HOM05D004230 ORTHO05D007976 3.3e-70 269.2 214 67.8
C08p27070 Brassica napus HOM05D004230 ORTHO05D007976 1.8e-68 263.5 148 85.1
BraA06t24715Z Brassica rapa HOM05D004230 ORTHO05D007976 7.0e-68 261.5 206 64.1
C05p44100 Brassica napus HOM05D004230 ORTHO05D007976 2.0e-67 260.0 214 66.8
C01p40550 Brassica napus HOM05D004230 ORTHO05D007976 2.6e-67 259.6 219 60.3
BcaC08g43996 Brassica carinata HOM05D004230 ORTHO05D007976 3.5e-67 259.2 156 82.7
BcaC05g28343 Brassica carinata HOM05D004230 ORTHO05D007976 7.7e-67 258.1 156 81.4
C01p22890 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-66 257.3 206 63.1
C01p22970 Brassica napus HOM05D004230 ORTHO05D007976 2.2e-66 256.5 206 63.6
BcaC09g52278 Brassica carinata HOM05D004230 ORTHO05D007976 1.5e-65 253.8 206 62.6
BolC1t02226H Brassica oleracea HOM05D004230 ORTHO05D007976 1.5e-65 253.8 206 62.6
AL5G11160 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 1.9e-65 253.4 206 60.7
C01p22920 Brassica napus HOM05D004230 ORTHO05D007976 1.9e-65 253.4 206 62.6
BolC4t28062H Brassica oleracea HOM05D004230 ORTHO05D007976 5.2e-63 245.4 206 62.1
BraA01t02220Z Brassica rapa HOM05D004230 ORTHO05D007976 6.7e-63 245.0 204 65.7
Carub.0012s0003 Capsella rubella HOM05D004230 ORTHO05D007976 8.8e-63 244.6 217 58.1
BcaC01g03708 Brassica carinata HOM05D004230 ORTHO05D007976 1.1e-60 237.7 152 81.6
Carub.0007s3043 Capsella rubella HOM05D004230 ORTHO05D007976 1.4e-60 237.3 190 64.2
BcaB01g00472 Brassica carinata HOM05D004230 ORTHO05D007976 1.9e-57 226.9 185 67.0
BcaC07g36911 Brassica carinata HOM05D004230 ORTHO05D007976 5.5e-57 225.3 204 55.4
C08p01070 Brassica napus HOM05D004230 ORTHO05D007976 2.1e-56 223.4 204 54.9
C04p52580 Brassica napus HOM05D004230 ORTHO05D007976 1.8e-55 220.3 156 69.2
BcaB05g23135 Brassica carinata HOM05D004230 ORTHO05D007976 6.8e-55 218.4 156 67.9
BraA09t39059Z Brassica rapa HOM05D004230 ORTHO05D007976 1.2e-54 217.6 204 55.4
A09p35300 Brassica napus HOM05D004230 ORTHO05D007976 7.5e-54 214.9 204 54.9
C07p48530 Brassica napus HOM05D004230 ORTHO05D007976 3.1e-52 209.5 205 55.1
BolC7t45361H Brassica oleracea HOM05D004230 ORTHO05D007976 3.1e-52 209.5 205 55.1
BraA03t15403Z Brassica rapa HOM05D004230 ORTHO05D007976 1.6e-51 207.2 222 50.9
BcaC09g49449 Brassica carinata HOM05D004230 ORTHO05D007976 1.3e-50 204.1 227 49.8
SpUn0171_0010 Schrenkiella parvula HOM05D004230 ORTHO05D007976 6.8e-47 191.8 219 49.3
BcaB05g22709 Brassica carinata HOM05D004230 ORTHO05D007976 1.5e-46 190.7 207 50.7
BcaB07g32504 Brassica carinata HOM05D004230 ORTHO05D007976 2.0e-46 190.3 212 49.5
BolC4t25589H Brassica oleracea HOM05D004230 ORTHO05D007976 2.8e-45 186.4 119 80.7
BraA03t13046Z Brassica rapa HOM05D004230 ORTHO05D007976 1.1e-44 184.5 204 46.1
BcaC03g16826 Brassica carinata HOM05D004230 ORTHO05D007976 2.4e-44 183.3 203 51.7
A06p45730 Brassica napus HOM05D004230 ORTHO05D007976 3.1e-44 183.0 207 47.3
BraA06t26555Z Brassica rapa HOM05D004230 ORTHO05D007976 3.1e-44 183.0 207 47.3
AL7G44480 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 4.1e-44 182.6 182 50.0
BolC8t50322H Brassica oleracea HOM05D004230 ORTHO05D007976 4.1e-44 182.6 108 80.6
C02p00010 Brassica napus HOM05D004230 ORTHO05D007976 7.0e-44 181.8 207 46.9
Carub.0007s3045 Capsella rubella HOM05D004230 ORTHO05D007976 1.3e-42 177.6 152 61.2
BcaC05g28003 Brassica carinata HOM05D004230 ORTHO05D007976 6.6e-42 175.3 207 45.4
C05p40190 Brassica napus HOM05D004230 ORTHO05D007976 1.9e-41 173.7 207 44.9
BolC5t32761H Brassica oleracea HOM05D004230 ORTHO05D007976 1.9e-41 173.7 207 44.9
C01p36620 Brassica napus HOM05D004230 ORTHO05D007976 5.6e-41 172.2 154 57.1
BolC1t03622H Brassica oleracea HOM05D004230 ORTHO05D007976 5.6e-41 172.2 154 57.1
AT3G32904 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 2.8e-40 169.9 164 56.7
Carub.0007s3042 Capsella rubella HOM05D004230 ORTHO05D007976 6.1e-40 168.7 153 60.1
BcaC09g49286 Brassica carinata HOM05D004230 ORTHO05D007976 6.8e-39 165.2 116 73.3
Sp4g02630 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.5e-38 164.1 199 45.2
BcaB06g27526 Brassica carinata HOM05D004230 ORTHO05D007976 7.5e-38 161.8 207 44.9
BcaC02g08615 Brassica carinata HOM05D004230 ORTHO05D007976 2.9e-37 159.8 203 46.8
BraA10t43214Z Brassica rapa HOM05D004230 ORTHO05D007976 2.9e-37 159.8 161 49.1
BcaB07g32180 Brassica carinata HOM05D004230 ORTHO05D007976 5.4e-36 155.6 204 43.1
BolC8t46909H Brassica oleracea HOM05D004230 ORTHO05D007976 5.9e-35 152.1 155 51.0
AL8G19300 Arabidopsis lyrata HOM05D004230 ORTHO05D000037 2.9e-34 149.8 105 73.3
BcaC06g34422 Brassica carinata HOM05D004230 ORTHO05D007976 1.5e-33 147.5 206 41.7
AL8G23470 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 2.5e-33 146.7 131 58.0
BolC2t08058H Brassica oleracea HOM05D004230 ORTHO05D007976 2.5e-33 146.7 148 48.0
CARHR145800 Cardamine hirsuta HOM05D004230 ORTHO05D007976 3.3e-33 146.4 139 54.7
BolC7t42083H Brassica oleracea HOM05D004230 ORTHO05D007976 5.6e-33 145.6 148 48.0
C07p15900 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-32 144.4 148 47.3
BolC6t36485H Brassica oleracea HOM05D004230 ORTHO05D007976 5.2e-31 139.0 203 43.3
Carub.0007s3044 Capsella rubella HOM05D004230 ORTHO05D007976 5.2e-31 139.0 160 51.9
A03p38990 Brassica napus HOM05D004230 ORTHO05D007976 2.6e-30 136.7 204 39.7
A06p20520 Brassica napus HOM05D004230 ORTHO05D007976 2.6e-30 136.7 204 39.7
C03p27680 Brassica napus HOM05D004230 ORTHO05D007976 5.8e-30 135.6 202 42.6
BcaC09g49284 Brassica carinata HOM05D004230 ORTHO05D007976 7.5e-30 135.2 127 52.0
A03p63250 Brassica napus HOM05D004230 ORTHO05D007976 7.5e-30 135.2 114 61.4
Sp5g19020 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.3e-29 134.4 206 41.3
C02p19260 Brassica napus HOM05D004230 ORTHO05D007976 1.4e-28 131.0 128 49.2
Sp3g24280 Schrenkiella parvula HOM05D004230 ORTHO05D007976 4.6e-27 125.9 173 45.1
BolC5t33361H Brassica oleracea HOM05D004230 ORTHO05D007976 5.0e-26 122.5 193 40.9
Sp2g07590 Schrenkiella parvula HOM05D004230 ORTHO05D007976 3.4e-22 109.8 79 64.6
AT3G30520 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 7.5e-22 108.6 121 49.6
BcaC03g18110 Brassica carinata HOM05D004230 ORTHO05D007976 1.7e-21 107.5 112 47.3
CARHR102540 Cardamine hirsuta HOM05D004230 ORTHO05D007976 1.7e-21 107.5 147 41.5
AT1G35820 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 2.2e-21 107.1 157 39.5
BolC3t20706H Brassica oleracea HOM05D004230 ORTHO05D007976 1.9e-20 104.0 125 50.4
BcaC01g00380 Brassica carinata HOM05D004230 ORTHO05D007976 4.6e-19 99.4 105 43.8
BolC4t26773H Brassica oleracea HOM05D004230 ORTHO05D007976 6.0e-19 99.0 92 50.0
CARHR034450 Cardamine hirsuta HOM05D004230 ORTHO05D007976 1.5e-17 94.4 81 53.1
Carub.0007s3014 Capsella rubella HOM05D004230 ORTHO05D007976 1.9e-17 94.0 72 61.1
C07p28690 Brassica napus HOM05D004230 ORTHO05D007976 2.5e-17 93.6 75 56.0
BolC7t43407H Brassica oleracea HOM05D004230 ORTHO05D007976 2.5e-17 93.6 75 56.0
BcaC09g49346 Brassica carinata HOM05D004230 ORTHO05D024011 9.5e-17 91.7 95 51.6
Sp4g09110 Schrenkiella parvula HOM05D004230 ORTHO05D000563 9.5e-17 91.7 122 37.7
Sp3g29180 Schrenkiella parvula HOM05D004230 ORTHO05D007976 8.1e-16 88.6 156 35.9
C01p41050 Brassica napus HOM05D004230 ORTHO05D024011 1.1e-15 88.2 102 50.0
BolC1t04060H Brassica oleracea HOM05D004230 ORTHO05D024011 1.1e-15 88.2 102 50.0
BolC2t12233H Brassica oleracea HOM05D004230 ORTHO05D007976 2.3e-15 87.0 128 37.5
AT5G36080 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 5.2e-15 85.9 78 51.3
A01p37400 Brassica napus HOM05D004230 ORTHO05D021768 1.9e-12 77.4 88 40.9
BolC3t20148H Brassica oleracea HOM05D004230 ORTHO05D007976 1.9e-12 77.4 123 36.6
THA.LOC104819338 Tarenaya hassleriana HOM05D004230 ORTHO05D014126 2.7e-11 73.6 141 31.9
BraA09t39106Z Brassica rapa HOM05D004230 ORTHO05D007976 1.7e-10 70.9 73 45.2
CARHR113870 Cardamine hirsuta HOM05D004230 ORTHO05D007976 3.0e-10 70.1 64 54.7
C01p41060 Brassica napus HOM05D004230 ORTHO05D021768 3.9e-10 69.7 96 40.6
BcaC04g20691 Brassica carinata HOM05D006735 ORTHO05D009558 4.3e-09 66.2 183 26.2
BcaB05g23937 Brassica carinata HOM05D004230 ORTHO05D021768 9.6e-09 65.1 63 49.2
BcaC07g38146 Brassica carinata HOM05D006735 ORTHO05D009558 1.2e-08 64.7 183 26.2
BcaC09g51566 Brassica carinata HOM05D006735 ORTHO05D009558 4.7e-08 62.8 174 27.0
C07p04500 Brassica napus HOM05D004230 ORTHO05D007976 2.4e-07 60.5 100 35.0
A09p42550 Brassica napus HOM05D006735 ORTHO05D009558 3.1e-07 60.1 173 25.4
AL5G20550 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 5.2e-07 59.3 60 51.7
BcaC03g15864 Brassica carinata HOM05D006735 ORTHO05D009558 6.8e-07 58.9 179 26.3
BcaC08g45821 Brassica carinata HOM05D006735 ORTHO05D009558 8.9e-07 58.5 186 26.3
C07p53510 Brassica napus HOM05D004230 ORTHO05D027608 1.2e-06 58.2 58 58.6
C08p29240 Brassica napus HOM05D004230 ORTHO05D027608 1.2e-06 58.2 58 58.6
Carub.0005s0823 Capsella rubella HOM05D004230 ORTHO05D007976 1.2e-06 58.2 44 61.4
Sp1g33580 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.2e-06 58.2 105 40.0
BolC2t07759H Brassica oleracea HOM05D006735 ORTHO05D009558 2.0e-06 57.4 102 32.4
BcaC09g51945 Brassica carinata HOM05D006735 ORTHO05D009558 3.4e-06 56.6 179 24.6
BolC7t40845H Brassica oleracea HOM05D004230 ORTHO05D007976 3.4e-06 56.6 100 34.0
C09p40570 Brassica napus HOM05D006735 ORTHO05D009558 4.4e-06 56.2 144 27.1
BcaC09g48693 Brassica carinata HOM05D006735 ORTHO05D009558 7.6e-06 55.5 105 29.5


User provided reference genes

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