Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p32780 Brassica napus HOM05D007502 ORTHO05D011692 1.7e-158 562.8 309 100.0
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 1.1e-136 490.3 301 89.4
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 8.6e-131 470.7 307 84.4
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 8.6e-131 470.7 307 84.4
BcaB02g09909 Brassica carinata HOM05D007502 ORTHO05D010230 1.2e-50 204.5 170 74.7
BcaB02g09908 Brassica carinata HOM05D007502 ORTHO05D011692 3.7e-49 199.5 137 81.8
AT5G65925 Arabidopsis thaliana HOM05D007502 ORTHO05D011692 4.1e-48 196.1 133 76.7
AL8G43640 Arabidopsis lyrata HOM05D007502 ORTHO05D011692 5.4e-48 195.7 136 80.1
A02p44110 Brassica napus HOM05D007502 ORTHO05D011692 5.9e-47 192.2 134 77.6
BolC2t12501H Brassica oleracea HOM05D007502 ORTHO05D011692 5.9e-47 192.2 134 77.6
BraA02t09334Z Brassica rapa HOM05D007502 ORTHO05D011692 5.9e-47 192.2 134 77.6
C02p64370 Brassica napus HOM05D007502 ORTHO05D011692 1.7e-46 190.7 134 78.4
Sp2g29000 Schrenkiella parvula HOM05D007502 ORTHO05D011692 1.5e-45 187.6 133 79.7
Thhalv10005632m.g Eutrema salsugineum HOM05D007502 ORTHO05D011692 1.8e-43 180.6 134 74.6
Carub.0008s2682 Capsella rubella HOM05D007502 ORTHO05D011692 2.6e-42 176.8 135 73.3
CARHR279950 Cardamine hirsuta HOM05D007502 ORTHO05D010230 9.8e-42 174.9 162 66.7
CARHR279940 Cardamine hirsuta HOM05D007502 ORTHO05D011692 1.1e-40 171.4 133 70.7
Thhalv10005075m.g Eutrema salsugineum HOM05D007502 ORTHO05D010230 1.5e-37 161.0 148 66.2
BcaC03g18361 Brassica carinata HOM05D007502 ORTHO05D011692 4.3e-37 159.5 110 77.3
AT5G67640 Arabidopsis thaliana HOM05D007502 ORTHO05D010230 2.3e-35 153.7 188 60.1
Carub.0008s2683 Capsella rubella HOM05D007502 ORTHO05D010230 1.2e-34 151.4 185 56.2
AL8G43660 Arabidopsis lyrata HOM05D007502 ORTHO05D010230 2.5e-29 133.7 143 60.8
Thhalv10011022m.g Eutrema salsugineum HOM05D007502 ORTHO05D011692 5.6e-29 132.5 131 60.3
AT3G49820 Arabidopsis thaliana HOM05D007502 ORTHO05D011692 2.0e-26 124.0 133 57.9
A01p24440 Brassica napus HOM05D007502 ORTHO05D011692 2.6e-26 123.6 130 56.9
BraA01t02357Z Brassica rapa HOM05D007502 ORTHO05D011692 4.4e-26 122.9 130 56.9
BcaC09g49977 Brassica carinata HOM05D007502 ORTHO05D011692 7.5e-26 122.1 130 56.2
C01p30460 Brassica napus HOM05D007502 ORTHO05D011692 7.5e-26 122.1 130 56.2
BolC1t02989H Brassica oleracea HOM05D007502 ORTHO05D011692 7.5e-26 122.1 130 56.2
AL5G29820 Arabidopsis lyrata HOM05D007502 ORTHO05D011692 2.2e-25 120.6 132 55.3
Sp5g12270 Schrenkiella parvula HOM05D007502 ORTHO05D011692 4.6e-23 112.8 132 53.0
BcaC03g15504 Brassica carinata HOM05D007502 ORTHO05D011692 2.3e-22 110.5 75 73.3
BcaB05g23165 Brassica carinata HOM05D007502 ORTHO05D011692 5.1e-22 109.4 132 53.8
Carub.0005s1617 Capsella rubella HOM05D007502 ORTHO05D011692 3.6e-20 103.2 132 55.3
CARHR158890 Cardamine hirsuta HOM05D007502 ORTHO05D011692 1.8e-19 100.9 137 51.1
Ciclev10027603m.g Citrus clementina HOM05D007502 ORTHO05D010230 4.4e-18 96.3 167 43.7
Aa31LG1G16180 Aethionema arabicum HOM05D007502 ORTHO05D010230 2.4e-16 90.5 157 45.2
Cpa.g.c26343.2 Carica papaya HOM05D007502 ORTHO05D010230 2.1e-15 87.4 169 44.4
Gorai.007G225000 Gossypium raimondii HOM05D007502 ORTHO05D010230 1.2e-12 78.2 170 47.6
Lalb_Chr05g0213781 Lupinus albus HOM05D007502 ORTHO05D010230 3.1e-11 73.6 154 39.0
Gohir.D11G209800 Gossypium hirsutum HOM05D007502 ORTHO05D010230 6.9e-11 72.4 168 45.8
CSS0024819 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 1.2e-10 71.6 171 38.0
RcHm_v2.0_Chr2g0108411 Rosa chinensis HOM05D007502 ORTHO05D010230 1.5e-10 71.2 160 38.1
PGSC0003DMG401021412 Solanum tuberosum HOM05D007502 ORTHO05D010230 2.0e-10 70.9 147 48.3
Eucgr.I00691 Eucalyptus grandis HOM05D007502 ORTHO05D010230 3.4e-10 70.1 183 42.6
Potri.007G006000 Populus trichocarpa HOM05D007502 ORTHO05D010230 3.4e-10 70.1 178 39.9
Prupe.6G218900 Prunus persica HOM05D007502 ORTHO05D010230 3.4e-10 70.1 166 42.2
CiPaw.01G003100 Carya illinoinensis HOM05D007502 ORTHO05D010230 4.4e-10 69.7 164 36.0
QL06p039372 Quercus lobata HOM05D007502 ORTHO05D010230 4.4e-10 69.7 161 47.8
MD15G1299000 Malus domestica HOM05D007502 ORTHO05D010230 5.8e-10 69.3 174 39.1
Thecc.01G074400 Theobroma cacao HOM05D007502 ORTHO05D010230 9.9e-10 68.6 168 46.4
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 1.7e-09 67.8 331 27.5
Gohir.A11G213400 Gossypium hirsutum HOM05D007502 ORTHO05D010230 2.2e-09 67.4 166 45.2
Duzib187G0517 Durio zibethinus HOM05D007502 ORTHO05D010230 3.8e-09 66.6 181 43.1
CANSAT01G3167 Cannabis sativa HOM05D007502 ORTHO05D010230 1.9e-08 64.3 156 37.8
COL.COLO4_11595 Corchorus olitorius HOM05D007502 ORTHO05D010230 2.4e-08 63.9 161 42.2
Glyma.05G107000 Glycine max HOM05D001896 ORTHO05D001862 3.2e-08 63.5 143 35.0
Glyma.11G046600 Glycine max HOM05D007502 ORTHO05D010230 3.2e-08 63.5 156 35.3
Cfa004764 Carpinus fangiana HOM05D007502 ORTHO05D010230 5.4e-08 62.8 177 39.0
Cc07_g07260 Coffea canephora HOM05D007502 ORTHO05D010230 5.4e-08 62.8 160 35.0
Solyc02g092200.3 Solanum lycopersicum HOM05D007502 ORTHO05D010230 5.4e-08 62.8 164 43.3
CSS0004026 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 9.3e-08 62.0 143 39.2
CAN.G1075.51 Capsicum annuum HOM05D001896 ORTHO05D001862 1.6e-07 61.2 133 37.6
Medtr5g015230 Medicago truncatula HOM05D007502 ORTHO05D010230 3.5e-07 60.1 161 36.0
Actinidia11971 Actinidia chinensis HOM05D007502 ORTHO05D010230 6.0e-07 59.3 166 40.4
Haze_10361 Corylus avellana HOM05D007502 ORTHO05D010230 7.8e-07 58.9 167 40.7
Phvul.002G009800 Phaseolus vulgaris HOM05D007502 ORTHO05D010230 1.3e-06 58.2 152 32.2
Sopen02g036770 Solanum pennellii HOM05D007502 ORTHO05D010230 1.3e-06 58.2 170 41.2
Lj2g0008607 Lotus japonicus HOM05D007502 ORTHO05D010230 3.0e-06 57.0 188 34.0
CANSAT01G1870 Cannabis sativa HOM05D001896 ORTHO05D001862 3.9e-06 56.6 140 32.1
Sabra07G0004300 Salix brachista HOM05D007502 ORTHO05D010230 3.9e-06 56.6 166 37.3
Actinidia36426 Actinidia chinensis HOM05D001896 ORTHO05D001862 5.1e-06 56.2 288 28.8
TAR628G1349 Trochodendron aralioides HOM05D007502 ORTHO05D010230 6.6e-06 55.8 161 39.8
vmacro05426 Vaccinium macrocarpon HOM05D007502 ORTHO05D010230 6.6e-06 55.8 169 34.3
CDE06G1988 Ceratophyllum demersum HOM05D007502 ORTHO05D010230 8.7e-06 55.5 98 39.8
DCAR_025816 Daucus carota HOM05D007502 ORTHO05D010230 8.7e-06 55.5 160 33.8
MD02G1188200 Malus domestica HOM05D001896 ORTHO05D001862 8.7e-06 55.5 145 36.6
Psat2g171920 Pisum sativum HOM05D007502 ORTHO05D010230 8.7e-06 55.5 134 34.3


User provided reference genes

Program Settings