Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p31670 Brassica napus HOM05D012887 ORTHO05D008511 3.5e-56 221.9 156 100.0
BraA06t26102Z Brassica rapa HOM05D012887 ORTHO05D008511 7.9e-56 220.7 156 99.4
BcaC01g02721 Brassica carinata HOM05D012887 ORTHO05D008511 1.9e-49 199.5 156 78.2
C03p61290 Brassica napus HOM05D012887 ORTHO05D008511 1.9e-49 199.5 156 78.2
BolC3t18390H Brassica oleracea HOM05D012887 ORTHO05D008511 1.9e-49 199.5 156 78.2
BcaB02g09838 Brassica carinata HOM05D012887 ORTHO05D008511 3.7e-45 185.3 116 81.9
Sp2g27960 Schrenkiella parvula HOM05D012887 ORTHO05D008511 1.9e-38 162.9 165 73.9
CARHR278890 Cardamine hirsuta HOM05D012887 ORTHO05D008511 1.8e-36 156.4 165 57.0
AT5G64880 Arabidopsis thaliana HOM05D012887 ORTHO05D008511 3.8e-34 148.7 165 52.7
AL8G42370 Arabidopsis lyrata HOM05D012887 ORTHO05D008511 6.5e-34 147.9 166 53.0
Carub.0008s2571 Capsella rubella HOM05D012887 ORTHO05D008511 4.8e-29 131.7 160 50.6
Aa31LG1G17050 Aethionema arabicum HOM05D012887 ORTHO05D008511 7.4e-22 107.8 166 65.1
THA.LOC104799256 Tarenaya hassleriana HOM05D012887 ORTHO05D008511 5.3e-12 75.1 110 48.2
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 7.2e-09 64.7 157 29.9
Potri.005G083900 Populus trichocarpa HOM05D007384 ORTHO05D008511 4.0e-07 58.9 161 35.4
CsaV3_2G017570 Cucumis sativus L. HOM05D007384 ORTHO05D008511 1.2e-06 57.4 159 27.7
Manes.12G142100 Manihot esculenta HOM05D007384 ORTHO05D008511 1.2e-06 57.4 84 45.2
Duzib147G1655 Durio zibethinus HOM05D007384 ORTHO05D008511 1.5e-06 57.0 102 36.3
TWI74G0307 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 1.5e-06 57.0 100 36.0
CANSAT01G1949 Cannabis sativa HOM05D007384 ORTHO05D008511 2.6e-06 56.2 97 35.1
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 2.6e-06 56.2 156 30.1
Manes.13G077680 Manihot esculenta HOM05D007384 ORTHO05D008511 5.7e-06 55.1 71 45.1
FAN23G2853 Fragaria x ananassa HOM05D007384 ORTHO05D008511 9.7e-06 54.3 153 35.3
Sabra05G0069000 Salix brachista HOM05D007384 ORTHO05D008511 9.7e-06 54.3 155 28.4


User provided reference genes

Program Settings