Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p31630 Brassica napus HOM05D006130 ORTHO05D007491 5.5e-196 687.6 376 100.0
C03p61330 Brassica napus HOM05D006130 ORTHO05D007491 3.2e-180 635.2 376 87.0
BraA06t26099Z Brassica rapa HOM05D006130 ORTHO05D007491 3.9e-178 628.2 370 94.1
BolC3t18393H Brassica oleracea HOM05D006130 ORTHO05D007491 3.1e-175 618.6 376 90.2
BcaC01g02716 Brassica carinata HOM05D006130 ORTHO05D007491 3.0e-170 602.1 363 86.0
BcaB02g09834 Brassica carinata HOM05D006130 ORTHO05D007491 2.2e-165 585.9 380 87.4
Sp2g27910 Schrenkiella parvula HOM05D006130 ORTHO05D007491 2.0e-161 572.8 385 83.6
Thhalv10004393m.g Eutrema salsugineum HOM05D006130 ORTHO05D007491 7.2e-156 554.3 384 77.6
AL8G42310 Arabidopsis lyrata HOM05D006130 ORTHO05D007491 1.0e-154 550.4 385 81.0
CARHR278840 Cardamine hirsuta HOM05D006130 ORTHO05D007491 1.8e-154 549.7 380 81.1
Carub.0008s2566 Capsella rubella HOM05D006130 ORTHO05D007491 2.5e-148 529.3 380 78.4
Aa31LG1G17100 Aethionema arabicum HOM05D006130 ORTHO05D007491 1.0e-117 427.6 370 60.8
THA.LOC104818474 Tarenaya hassleriana HOM05D006130 ORTHO05D007491 8.1e-115 417.9 394 56.3
AT5G64830 Arabidopsis thaliana HOM05D006130 ORTHO05D007491 9.6e-92 341.3 283 78.8
Cpa.g.sc191.11 Carica papaya HOM05D006130 ORTHO05D007491 1.1e-87 327.8 382 49.2
TWI74G0604 Tripterygium wilfordii HOM05D006130 ORTHO05D007491 1.6e-86 323.9 395 49.6
FAN23G0816 Fragaria x ananassa HOM05D006130 ORTHO05D007491 6.0e-86 322.0 376 47.3
FAN19G1269 Fragaria x ananassa HOM05D006130 ORTHO05D007491 1.8e-85 320.5 376 47.3
QL06p031976 Quercus lobata HOM05D006130 ORTHO05D007491 3.0e-85 319.7 380 47.4
Ciclev10026167m.g Citrus clementina HOM05D006130 ORTHO05D007491 6.7e-85 318.5 376 51.3
MD15G1331600 Malus domestica HOM05D006130 ORTHO05D007491 8.7e-85 318.2 373 48.0
PGR102G0730 Punica granatum HOM05D006130 ORTHO05D007491 7.4e-84 315.1 380 47.4
RcHm_v2.0_Chr2g0117041 Rosa chinensis HOM05D006130 ORTHO05D007491 9.6e-84 314.7 380 46.6
Haze_25050 Corylus avellana HOM05D006130 ORTHO05D007491 1.6e-83 313.9 394 46.4
Thecc.01G113900 Theobroma cacao HOM05D006130 ORTHO05D007491 6.3e-83 312.0 383 46.5
Cfa002758 Carpinus fangiana HOM05D006130 ORTHO05D007491 1.4e-82 310.8 395 45.8
MBI05_g29098_MAGBIO Magnolia biondii HOM05D006130 ORTHO05D007491 4.1e-82 309.3 376 44.7
CANSAT80G2857 Cannabis sativa HOM05D006130 ORTHO05D007491 3.4e-81 306.2 375 46.1
Dinv42687 Davidia involucrata HOM05D006130 ORTHO05D007491 1.3e-80 304.3 384 45.6
Prupe.6G171600 Prunus persica HOM05D006130 ORTHO05D007491 1.3e-80 304.3 374 46.3
Dinv19481 Davidia involucrata HOM05D006130 ORTHO05D007491 1.7e-80 303.9 383 45.4
Gorai.007G244700 Gossypium raimondii HOM05D006130 ORTHO05D007491 5.0e-80 302.4 385 45.2
Sabra07G0067600 Salix brachista HOM05D006130 ORTHO05D007491 1.9e-79 300.4 387 45.5
Gohir.D11G231600 Gossypium hirsutum HOM05D006130 ORTHO05D007491 2.5e-79 300.1 385 45.7
Manes.12G143200 Manihot esculenta HOM05D006130 ORTHO05D007491 2.5e-79 300.1 381 44.1
Lj2C566T4 Lonicera japonica HOM05D006130 ORTHO05D007491 4.2e-79 299.3 371 45.3
Duzib264G0573 Durio zibethinus HOM05D006130 ORTHO05D007491 7.2e-79 298.5 385 46.5
Cc07_g16320 Coffea canephora HOM05D006130 ORTHO05D007491 2.7e-78 296.6 385 44.9
Gohir.A11G197900 Gossypium hirsutum HOM05D006130 ORTHO05D007491 2.7e-78 296.6 385 45.2
CiPaw.04G091300 Carya illinoinensis HOM05D006130 ORTHO05D007491 4.6e-78 295.8 379 43.8
Potri.007G080500 Populus trichocarpa HOM05D006130 ORTHO05D007491 7.9e-78 295.0 377 45.1
CAN.G347.1 Capsicum annuum HOM05D006130 ORTHO05D007491 1.0e-77 294.7 372 46.2
Atru.chr4.339 Acer truncatum HOM05D006130 ORTHO05D007491 3.0e-77 293.1 384 46.4
FAN26G2148 Fragaria x ananassa HOM05D006130 ORTHO05D007491 3.9e-77 292.7 375 45.1
Rhsim08G0006100 Rhododendron simsii HOM05D006130 ORTHO05D007491 8.7e-77 291.6 372 44.1
ClCG11G005560 Citrullus lanatus HOM05D006130 ORTHO05D007491 1.5e-76 290.8 379 44.3
Solyc04g051780.3 Solanum lycopersicum HOM05D006130 ORTHO05D007491 1.9e-76 290.4 379 48.5
Sopen04g023130 Solanum pennellii HOM05D006130 ORTHO05D007491 1.9e-76 290.4 370 50.3
PGSC0003DMG400031208 Solanum tuberosum HOM05D006130 ORTHO05D007491 4.3e-76 289.3 375 50.4
Ca_16897_v3 Cicer arietinum L. HOM05D006130 ORTHO05D007491 7.4e-76 288.5 382 47.9
CsaV3_6G002440 Cucumis sativus L. HOM05D006130 ORTHO05D007491 2.2e-75 287.0 378 43.1
Sed0017229 Sechium edule HOM05D006130 ORTHO05D007491 2.2e-75 287.0 375 44.3
Duzib147G1554 Durio zibethinus HOM05D006130 ORTHO05D007491 3.7e-75 286.2 350 47.4
MELO3C025043.2 Cucumis melo HOM05D006130 ORTHO05D007491 6.3e-75 285.4 378 42.9
Oeu028522.1 Olea europaea HOM05D006130 ORTHO05D007491 8.2e-75 285.0 370 43.5
Eucgr.H04843 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.1e-74 284.6 386 43.0
Psat5g066000 Pisum sativum HOM05D006130 ORTHO05D007491 1.1e-74 284.6 383 46.2
TPR.G23729 Trifolium pratense HOM05D006130 ORTHO05D007491 1.1e-74 284.6 377 46.4
Lalb_Chr11g0068091 Lupinus albus HOM05D006130 ORTHO05D007491 6.9e-74 282.0 393 42.5
PSO170G1695 Papaver somniferum HOM05D006130 ORTHO05D007491 9.0e-74 281.6 381 44.1
Nitab4.5_0004840g0040 Nicotiana tabacum HOM05D006130 ORTHO05D007491 2.0e-73 280.4 374 46.5
ECA238G3253 Erigeron canadensis HOM05D006130 ORTHO05D007491 4.5e-73 279.3 369 44.2
AUR62016283 Chenopodium quinoa HOM05D006130 ORTHO05D007491 1.7e-72 277.3 382 44.0
Glyma.04G218800 Glycine max HOM05D006130 ORTHO05D007491 2.2e-72 276.9 389 42.9
Lsat_1_v5_gn_2_67140 Lactuca sativa HOM05D006130 ORTHO05D007491 3.8e-72 276.2 367 45.2
Nitab4.5_0015691g0010 Nicotiana tabacum HOM05D006130 ORTHO05D007491 3.8e-72 276.2 380 44.5
Phvul.009G139000 Phaseolus vulgaris HOM05D006130 ORTHO05D007491 8.5e-72 275.0 383 43.6
PSO210G3121 Papaver somniferum HOM05D006130 ORTHO05D007491 1.4e-71 274.2 377 41.4
EL10Ac6g14758 Beta vulgaris HOM05D006130 ORTHO05D007491 3.2e-71 273.1 383 42.8
Lj1g0022742 Lotus japonicus HOM05D006130 ORTHO05D007491 3.2e-71 273.1 376 45.2
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 7.2e-71 271.9 367 44.7
GSVIVG01022236001 Vitis vinifera HOM05D006130 ORTHO05D007491 1.6e-70 270.8 382 42.1
AUR62003302 Chenopodium quinoa HOM05D006130 ORTHO05D007491 2.7e-70 270.0 384 43.8
Aqoxy7G04042 Aquilegia oxysepala HOM05D006130 ORTHO05D007491 4.6e-70 269.2 379 42.0
DCAR_001374 Daucus carota HOM05D006130 ORTHO05D007491 6.1e-70 268.9 413 38.3
Nn5g28889 Nelumbo nucifera HOM05D006130 ORTHO05D007491 7.9e-70 268.5 388 42.5
HPP92_027147 Vanilla planifolia HOM05D006130 ORTHO05D007491 1.5e-68 264.2 375 42.4
HPP92_016462 Vanilla planifolia HOM05D006130 ORTHO05D007491 2.0e-68 263.8 382 41.4
MSTRG.15753 Avicennia marina HOM05D006130 ORTHO05D007491 3.3e-68 263.1 371 42.3
VMungo1309G1738 Vigna mungo HOM05D006130 ORTHO05D007491 4.3e-68 262.7 364 43.7
Eucgr.H04852 Eucalyptus grandis HOM05D006130 ORTHO05D007491 5.7e-68 262.3 385 41.6
Medtr3g095020 Medicago truncatula HOM05D006130 ORTHO05D007491 1.3e-67 261.2 373 45.0
vmacro18637 Vaccinium macrocarpon HOM05D006130 ORTHO05D007491 3.7e-67 259.6 352 46.0
HanXRQChr14g0445741 Helianthus annuus HOM05D006130 ORTHO05D007491 4.8e-67 259.2 367 42.8
Peaxi162Scf00106g00208 Petunia axillaris HOM05D006130 ORTHO05D007491 6.3e-67 258.8 374 43.3
Migut.L00069 Erythranthe guttata HOM05D006130 ORTHO05D007491 8.2e-67 258.5 376 42.3
ATR0665G503 Amborella trichopoda HOM05D006130 ORTHO05D007491 5.3e-66 255.8 387 40.3
Os04g0640800 Oryza sativa ssp. japonica HOM05D006130 ORTHO05D007491 1.7e-64 250.8 383 43.9
SEGI_25559 Sequoiadendron giganteum HOM05D006130 ORTHO05D007491 1.7e-64 250.8 395 38.0
SalBow5G2487 Salvia bowleyana HOM05D006130 ORTHO05D007491 5.0e-64 249.2 375 42.1
arahy.Tifrunner.gnm1.ann1.JIC903 Arachis hypogaea HOM05D006130 ORTHO05D007491 6.5e-64 248.8 379 40.6
SGA_v2.0_scaffold47G17703 Striga asiatica HOM05D006130 ORTHO05D007491 1.1e-63 248.1 377 41.6
CDE09G1360 Ceratophyllum demersum HOM05D006130 ORTHO05D007491 2.7e-62 243.4 377 38.7
SMO358G0378 Selaginella moellendorffii HOM05D006130 ORTHO05D007491 3.6e-62 243.0 397 36.5
Zm00001eb431860 Zea mays HOM05D006130 ORTHO05D007491 1.8e-61 240.7 374 41.2
Eucgr.H04859 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.3e-61 240.4 385 38.7
arahy.Tifrunner.gnm1.ann1.S5QZ0Z Arachis hypogaea HOM05D006130 ORTHO05D007491 3.0e-61 240.0 384 39.8
Eucgr.H04856 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.6e-60 236.9 382 40.8
FvH4_1g22740 Fragaria vesca HOM05D006130 ORTHO05D007491 9.7e-60 235.0 317 43.5
Hund03536 Selenicereus undatus HOM05D006130 ORTHO05D007491 4.8e-59 232.6 403 40.2
unitig_62.g23431 Utricularia gibba HOM05D006130 ORTHO05D007491 1.2e-57 228.0 372 40.3
GSVIVG01022231001 Vitis vinifera HOM05D006130 ORTHO05D007491 5.5e-55 219.2 371 36.9
Eucgr.H04846 Eucalyptus grandis HOM05D006130 ORTHO05D007491 5.2e-53 212.6 345 40.6
Mapoly0014s0114 Marchantia polymorpha HOM05D006130 ORTHO05D007491 6.7e-53 212.2 380 36.6
Pp3c16_16240 Physcomitrium patens HOM05D006130 ORTHO05D007491 2.8e-51 206.8 383 34.5
Ah.14g080600 Amaranthus hybridus HOM05D006130 ORTHO05D007491 4.1e-50 203.0 353 38.2
TAR628G0645 Trochodendron aralioides HOM05D006130 ORTHO05D007491 2.9e-48 196.8 280 42.5
COL.COLO4_11003 Corchorus olitorius HOM05D006130 ORTHO05D007491 1.1e-47 194.9 373 35.4
Hma1.2p1_0375F.1_g138770 Hydrangea macrophylla HOM05D006130 ORTHO05D007491 5.5e-47 192.6 313 39.3
Actinidia12211 Actinidia chinensis HOM05D006130 ORTHO05D007491 7.2e-47 192.2 264 43.2
Ah.03g141370 Amaranthus hybridus HOM05D006130 ORTHO05D007491 1.2e-46 191.4 298 42.3
Sc03g0004370 Simmondsia chinensis HOM05D006130 ORTHO05D007491 8.0e-46 188.7 274 43.1
Eucgr.H04861 Eucalyptus grandis HOM05D006130 ORTHO05D007491 6.3e-43 179.1 190 50.5
Glyma.06G147000 Glycine max HOM05D006130 ORTHO05D007491 1.2e-41 174.9 158 57.6
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-40 168.7 182 51.1
CBR_g30690 Chara braunii HOM05D006130 ORTHO05D007491 1.5e-39 167.9 481 31.0
AagrBONN_evm.TU.Sc2ySwM_228.1847 Anthoceros agrestis HOM05D006130 ORTHO05D007491 7.8e-25 119.0 138 44.9
SGA_v2.0_scaffold34G13625 Striga asiatica HOM05D006130 ORTHO05D007491 5.8e-20 102.8 87 55.2
AagrBONN_evm.TU.Sc2ySwM_228.1848 Anthoceros agrestis HOM05D006130 ORTHO05D007491 1.9e-18 97.8 85 56.5
MCO11G927 Micromonas commoda HOM05D006130 ORTHO05D007491 4.1e-18 96.7 429 26.8
Actinidia35264 Actinidia chinensis HOM05D006130 ORTHO05D007491 2.8e-14 84.0 93 50.5
SGA_v2.0_scaffold32G12965 Striga asiatica HOM05D006130 ORTHO05D007491 3.7e-11 73.6 81 51.9
Sed0013075 Sechium edule HOM05D005189 ORTHO05D006093 1.9e-10 71.2 356 22.8
Cre14.g608500 Chlamydomonas reinhardtii HOM05D006130 ORTHO05D007491 2.4e-10 70.9 122 32.0
PSO765G0055 Papaver somniferum HOM05D005189 ORTHO05D006093 2.7e-09 67.4 353 24.9
Aqoxy2G02861 Aquilegia oxysepala HOM05D005189 ORTHO05D006093 3.5e-09 67.0 354 23.2
PSO782G1813 Papaver somniferum HOM05D005189 ORTHO05D006093 3.5e-09 67.0 351 25.6
FAN16G0469 Fragaria x ananassa HOM05D005189 ORTHO05D006093 1.0e-08 65.5 344 23.0
ClCG03G014110 Citrullus lanatus HOM05D005189 ORTHO05D006093 1.7e-08 64.7 356 21.6
CSS0046497 Camellia sinensis var. sinensis HOM05D005189 ORTHO05D006093 2.3e-08 64.3 333 22.2
FAN21G1757 Fragaria x ananassa HOM05D005189 ORTHO05D006093 2.3e-08 64.3 346 23.4
TWI23G0603 Tripterygium wilfordii HOM05D005189 ORTHO05D006093 2.3e-08 64.3 352 22.2
Aa31LG5G1890 Aethionema arabicum HOM05D005189 ORTHO05D006093 3.9e-08 63.5 349 24.9
MBI19_g05150_MAGBIO Magnolia biondii HOM05D005189 ORTHO05D006093 3.9e-08 63.5 353 23.2
HPP92_013737 Vanilla planifolia HOM05D005189 ORTHO05D006093 3.9e-08 63.5 371 22.6
CSS0031632 Camellia sinensis var. sinensis HOM05D005189 ORTHO05D006093 5.1e-08 63.2 350 22.9
AUR62024701 Chenopodium quinoa HOM05D005189 ORTHO05D006093 6.6e-08 62.8 369 23.8
ATR0665G541 Amborella trichopoda HOM05D005189 ORTHO05D006093 8.6e-08 62.4 349 22.9
Lj5C676G0 Lonicera japonica HOM05D005189 ORTHO05D006093 8.6e-08 62.4 99 34.3
RcHm_v2.0_Chr5g0024021 Rosa chinensis HOM05D005189 ORTHO05D006093 8.6e-08 62.4 345 22.9
TAR365G0047 Trochodendron aralioides HOM05D005189 ORTHO05D006093 8.6e-08 62.4 351 23.4
MELO3C015632.2 Cucumis melo HOM05D005189 ORTHO05D006093 1.5e-07 61.6 349 21.5
AL6G50910 Arabidopsis lyrata HOM05D005189 ORTHO05D006093 1.9e-07 61.2 345 23.5
AT4G02220 Arabidopsis thaliana HOM05D005189 ORTHO05D006093 1.9e-07 61.2 347 23.9
FvH4_3g14570 Fragaria vesca HOM05D005189 ORTHO05D006093 2.5e-07 60.8 347 23.1
FAN11G2688 Fragaria x ananassa HOM05D005189 ORTHO05D006093 3.3e-07 60.5 181 28.2
Glyma.09G081700 Glycine max HOM05D005189 ORTHO05D006093 4.3e-07 60.1 348 22.1
GSVIVG01028059001 Vitis vinifera HOM05D005189 ORTHO05D006093 4.3e-07 60.1 356 22.5
Aqoxy22s002 Aquilegia oxysepala HOM05D005189 ORTHO05D006093 5.6e-07 59.7 171 27.5
CiPaw.01G112900 Carya illinoinensis HOM05D005189 ORTHO05D006093 5.6e-07 59.7 367 22.1
DCAR_006919 Daucus carota HOM05D005189 ORTHO05D006093 5.6e-07 59.7 338 22.5
Duzib128G0399 Durio zibethinus HOM05D005189 ORTHO05D006093 7.3e-07 59.3 341 24.3
CBR_g22284 Chara braunii HOM05D005189 ORTHO05D006093 9.5e-07 58.9 103 33.0
QL06p006883 Quercus lobata HOM05D005189 ORTHO05D006093 9.5e-07 58.9 346 22.3
Carub.0006s3494 Capsella rubella HOM05D005189 ORTHO05D006093 1.6e-06 58.2 349 22.6
Potri.002G201200 Populus trichocarpa HOM05D005189 ORTHO05D006093 1.6e-06 58.2 357 21.3
Actinidia25825 Actinidia chinensis HOM05D005189 ORTHO05D006093 2.1e-06 57.8 348 21.3
CsaV3_1G042140 Cucumis sativus L. HOM05D005189 ORTHO05D006093 2.8e-06 57.4 343 21.9
Nn8g40249 Nelumbo nucifera HOM05D005189 ORTHO05D006093 2.8e-06 57.4 334 23.4
Thhalv10028689m.g Eutrema salsugineum HOM05D005189 ORTHO05D006093 3.6e-06 57.0 340 22.6
DCAR_005781 Daucus carota HOM05D005189 ORTHO05D006093 4.7e-06 56.6 338 21.6
SalBow6G1077 Salvia bowleyana HOM05D005189 ORTHO05D006093 4.7e-06 56.6 358 20.9
EL10Ac2g03409 Beta vulgaris HOM05D005189 ORTHO05D006093 6.2e-06 56.2 353 23.2
HanXRQChr08g0218711 Helianthus annuus HOM05D006130 ORTHO05D007491 8.1e-06 55.8 49 51.0


User provided reference genes

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