Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p30480 Brassica napus HOM05D007733 ORTHO05D009786 1.6e-32 142.1 72 100.0
BraA06t25997Z Brassica rapa HOM05D007733 ORTHO05D009786 1.8e-31 138.7 72 97.2
BcaC01g02637 Brassica carinata HOM05D007733 ORTHO05D009786 7.9e-27 123.2 72 90.3
BcaB02g09770 Brassica carinata HOM05D007733 ORTHO05D009786 2.4e-23 111.7 62 83.9
Aa31LG1G18010 Aethionema arabicum HOM05D007733 ORTHO05D009786 4.5e-22 107.5 70 77.1
Thhalv10005241m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 4.5e-22 107.5 70 77.1
Thhalv10015230m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 6.5e-21 103.6 62 82.3
AL6G19610 Arabidopsis lyrata HOM05D007733 ORTHO05D009786 1.9e-20 102.1 70 77.1
BcaB05g21564 Brassica carinata HOM05D007733 ORTHO05D009786 1.9e-20 102.1 70 70.0
Carub.0006s0778 Capsella rubella HOM05D007733 ORTHO05D009786 2.5e-20 101.7 70 77.1
CARHR204200 Cardamine hirsuta HOM05D007733 ORTHO05D009786 2.5e-20 101.7 66 77.3
AT5G09225 Arabidopsis thaliana HOM05D007733 ORTHO05D009786 4.2e-20 100.9 69 78.3
BraA02t04971Z Brassica rapa HOM05D007733 ORTHO05D009786 1.6e-19 99.0 69 71.0
Sp6g34080 Schrenkiella parvula HOM05D007733 ORTHO05D009786 2.7e-19 98.2 69 68.1
THA.LOC104819346 Tarenaya hassleriana HOM05D007733 ORTHO05D009786 2.7e-19 98.2 59 78.0
BcaC03g13244 Brassica carinata HOM05D007733 ORTHO05D009786 3.5e-19 97.8 69 68.1
C02p03760 Brassica napus HOM05D007733 ORTHO05D009786 3.5e-19 97.8 69 68.1
BolC2t06337H Brassica oleracea HOM05D007733 ORTHO05D009786 3.5e-19 97.8 69 68.1
Oeu063785.1 Olea europaea HOM05D007733 ORTHO05D009786 1.6e-16 89.0 52 78.8
Migut.J01653 Erythranthe guttata HOM05D007733 ORTHO05D009786 2.2e-16 88.6 53 73.6
Potri.016G036400 Populus trichocarpa HOM05D007733 ORTHO05D009786 4.8e-16 87.4 52 76.9
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.1e-15 86.3 51 72.5
FAN06G4775 Fragaria x ananassa HOM05D007733 ORTHO05D009786 1.1e-15 86.3 51 72.5
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.1e-15 86.3 51 72.5
Potri.006G039100 Populus trichocarpa HOM05D007733 ORTHO05D009786 1.8e-15 85.5 55 69.1
RcHm_v2.0_Chr1g0328411 Rosa chinensis HOM05D007733 ORTHO05D009786 1.8e-15 85.5 47 76.6
SGA_v2.0_scaffold105G30286 Striga asiatica HOM05D007733 ORTHO05D009786 1.8e-15 85.5 58 69.0
Manes.01G136000 Manihot esculenta HOM05D007733 ORTHO05D009786 2.4e-15 85.1 52 73.1
PGSC0003DMG401008361 Solanum tuberosum HOM05D007733 ORTHO05D009786 2.4e-15 85.1 52 75.0
MD00G1018100 Malus domestica HOM05D007733 ORTHO05D009786 4.1e-15 84.3 51 74.5
CsaV3_4G029620 Cucumis sativus L. HOM05D007733 ORTHO05D009786 6.9e-15 83.6 52 73.1
Lalb_Chr06g0173691 Lupinus albus HOM05D007733 ORTHO05D009786 6.9e-15 83.6 52 75.0
PGR031G3673 Punica granatum HOM05D007733 ORTHO05D009786 6.9e-15 83.6 61 63.9
Solyc10g078420.2 Solanum lycopersicum HOM05D007733 ORTHO05D009786 9.0e-15 83.2 52 73.1
arahy.Tifrunner.gnm1.ann1.2TE5XM Arachis hypogaea HOM05D007733 ORTHO05D009786 1.2e-14 82.8 60 66.7
RcHm_v2.0_Chr1g0328511 Rosa chinensis HOM05D007733 ORTHO05D009786 1.2e-14 82.8 51 68.6
SGA_v2.0_scaffold3G01720 Striga asiatica HOM05D007733 ORTHO05D009786 1.2e-14 82.8 53 71.7
Atru.chr1.1436 Acer truncatum HOM05D007733 ORTHO05D009786 1.5e-14 82.4 55 67.3
Gohir.A11G247101 Gossypium hirsutum HOM05D007733 ORTHO05D009786 1.5e-14 82.4 53 69.8
Sed0021033 Sechium edule HOM05D007733 ORTHO05D009786 1.5e-14 82.4 52 71.2
MELO3C019082.2 Cucumis melo HOM05D007733 ORTHO05D009786 2.0e-14 82.0 52 71.2
MD12G1095600 Malus domestica HOM05D007733 ORTHO05D009786 2.0e-14 82.0 59 62.7
RcHm_v2.0_Chr1g0328381 Rosa chinensis HOM05D007733 ORTHO05D009786 2.0e-14 82.0 47 74.5
Thecc.01G129600 Theobroma cacao HOM05D007733 ORTHO05D009786 2.0e-14 82.0 46 78.3
CAN.G960.60 Capsicum annuum HOM05D007733 ORTHO05D009786 2.6e-14 81.6 52 71.2
Glyma.13G315500 Glycine max HOM05D007733 ORTHO05D009786 2.6e-14 81.6 61 65.6
Peaxi162Scf00696g00026 Petunia axillaris HOM05D007733 ORTHO05D009786 2.6e-14 81.6 51 72.5
Phvul.005G122800 Phaseolus vulgaris HOM05D007733 ORTHO05D009786 2.6e-14 81.6 59 66.1
Prupe.7G032300 Prunus persica HOM05D007733 ORTHO05D009786 2.6e-14 81.6 51 72.5
CSS0016184 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 3.4e-14 81.3 61 62.3
CSS0036430 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 3.4e-14 81.3 61 62.3
Hma1.2p1_0757F.1_g213300 Hydrangea macrophylla HOM05D007733 ORTHO05D009786 3.4e-14 81.3 51 72.5
Medtr1g069390 Medicago truncatula HOM05D007733 ORTHO05D009786 3.4e-14 81.3 53 67.9
Psat4g102040 Pisum sativum HOM05D007733 ORTHO05D009786 3.4e-14 81.3 53 69.8
CSS0035024 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 4.5e-14 80.9 61 63.9
CiPaw.09G048000 Carya illinoinensis HOM05D007733 ORTHO05D009786 4.5e-14 80.9 63 63.5
TWI74G1577 Tripterygium wilfordii HOM05D007733 ORTHO05D009786 4.5e-14 80.9 65 64.6
Os11g0136701 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 5.9e-14 80.5 54 70.4
Glyma.12G186000 Glycine max HOM05D007733 ORTHO05D009786 7.7e-14 80.1 61 63.9
Duzib264G0681 Durio zibethinus HOM05D007733 ORTHO05D009786 1.0e-13 79.7 53 69.8
PSO384G4410 Papaver somniferum HOM05D007733 ORTHO05D009786 1.3e-13 79.3 46 71.7
CDE04G2892 Ceratophyllum demersum HOM05D007733 ORTHO05D009786 1.7e-13 79.0 61 63.9
Cc06_g19360 Coffea canephora HOM05D007733 ORTHO05D009786 2.9e-13 78.2 52 67.3
COL.COLO4_35702 Corchorus olitorius HOM05D007733 ORTHO05D009786 2.9e-13 78.2 41 82.9
Oeu022972.2 Olea europaea HOM05D007733 ORTHO05D009786 2.9e-13 78.2 41 82.9
Os12g0133600 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 2.9e-13 78.2 54 68.5
Aqoxy1G00180 Aquilegia oxysepala HOM05D007733 ORTHO05D009786 3.8e-13 77.8 50 68.0
FAN01G2779 Fragaria x ananassa HOM05D000072 ORTHO05D000026 3.8e-13 77.8 49 67.3
arahy.Tifrunner.gnm1.ann1.05QC9F Arachis hypogaea HOM05D007733 ORTHO05D009786 6.5e-13 77.0 46 73.9
vmacro07790 Vaccinium macrocarpon HOM05D007733 ORTHO05D009786 6.5e-13 77.0 47 70.2
GSVIVG01004069001 Vitis vinifera HOM05D007733 ORTHO05D009786 6.5e-13 77.0 67 56.7
CANSAT64G1685 Cannabis sativa HOM05D007733 ORTHO05D009786 1.1e-12 76.3 44 75.0
Sc19g0008160 Simmondsia chinensis HOM05D007733 ORTHO05D009786 1.1e-12 76.3 41 78.0
Gohir.D11G257301 Gossypium hirsutum HOM05D007733 ORTHO05D009786 1.9e-12 75.5 41 78.0
Gorai.007G275700 Gossypium raimondii HOM05D007733 ORTHO05D009786 1.9e-12 75.5 41 78.0
Nitab4.5_0004588g0050 Nicotiana tabacum HOM05D007733 ORTHO05D009786 1.9e-12 75.5 42 78.6
HanXRQChr01g0008231 Helianthus annuus HOM05D007733 ORTHO05D009786 3.2e-12 74.7 42 73.8
Nitab4.5_0000812g0080 Nicotiana tabacum HOM05D007733 ORTHO05D009786 5.5e-12 73.9 41 78.0
Lsat_1_v5_gn_5_157040 Lactuca sativa HOM05D007733 ORTHO05D009786 9.4e-12 73.2 52 65.4
Peaxi162Scf00848g00014 Petunia axillaris HOM05D007733 ORTHO05D009786 1.6e-11 72.4 41 75.6
MBI19_g20791_MAGBIO Magnolia biondii HOM05D007733 ORTHO05D009786 3.6e-11 71.2 44 68.2
SalBow7G0067 Salvia bowleyana HOM05D007733 ORTHO05D009786 7.9e-11 70.1 53 60.4
Hund24585 Selenicereus undatus HOM05D007733 ORTHO05D009786 1.0e-10 69.7 42 69.0
Manes.02G094502 Manihot esculenta HOM05D007733 ORTHO05D009786 2.3e-10 68.6 41 70.7
Zm00001eb093420 Zea mays HOM05D007733 ORTHO05D009786 5.1e-10 67.4 45 60.0
Peaxi162Scf00696g00024 Petunia axillaris HOM05D007733 ORTHO05D009786 6.7e-10 67.0 39 74.4
HPP92_015863 Vanilla planifolia HOM05D007733 ORTHO05D009786 2.0e-09 65.5 52 53.8
HPP92_015865 Vanilla planifolia HOM05D007733 ORTHO05D009786 2.0e-09 65.5 52 53.8
DCAR_027120 Daucus carota HOM05D000958 ORTHO05D000786 8.2e-08 60.1 34 76.5
RcHm_v2.0_Chr1g0328311 Rosa chinensis HOM05D007733 ORTHO05D009786 3.1e-07 58.2 30 76.7
Mapoly0009s0018 Marchantia polymorpha HOM05D007733 ORTHO05D009786 1.5e-06 55.8 64 43.8
Gohir.A11G247151 Gossypium hirsutum HOM05D007733 ORTHO05D009786 3.4e-06 54.7 53 56.6


User provided reference genes

Program Settings