Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 3.0e-159 565.1 279 100.0
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.3e-154 549.7 274 99.6
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 5.0e-138 494.6 276 89.1
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 6.2e-136 487.6 276 87.7
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 1.9e-121 439.5 276 81.5
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 3.3e-105 385.6 274 72.6
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 1.3e-104 383.6 274 73.7
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 2.1e-104 382.9 274 72.3
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 1.2e-102 377.1 274 72.6
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 1.9e-100 369.8 266 72.6
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 3.0e-90 335.9 219 79.0
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 8.7e-90 334.3 219 78.5
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 8.7e-90 334.3 219 78.5
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 8.5e-85 317.8 178 86.5
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 1.0e-74 284.3 257 61.9
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 3.0e-74 282.7 204 73.5
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 2.0e-73 280.0 206 72.8
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 2.8e-72 276.2 257 60.7
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 3.1e-71 272.7 200 73.0
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 9.4e-60 234.6 170 74.7
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 1.0e-58 231.1 179 66.5
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 1.3e-53 214.2 126 83.3
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 1.0e-50 204.5 165 67.9
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 1.8e-50 203.8 163 68.1
BraA09t39372Z Brassica rapa HOM05D007694 ORTHO05D018628 3.0e-50 203.0 132 81.1
A01p18710 Brassica napus HOM05D007694 ORTHO05D018628 1.1e-47 194.5 134 79.1
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 2.4e-47 193.4 178 60.1
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 2.3e-42 176.8 200 51.0
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 4.0e-42 176.0 236 44.9
BolC6t39327H Brassica oleracea HOM05D007694 ORTHO05D019925 4.0e-42 176.0 97 85.6
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 6.8e-42 175.3 193 52.3
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 6.8e-42 175.3 198 51.0
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 7.0e-39 165.2 198 51.5
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 9.2e-39 164.9 201 51.7
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 1.3e-37 161.0 200 48.5
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 1.3e-37 161.0 200 48.5
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 4.7e-35 152.5 136 63.2
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 1.3e-32 144.4 168 50.0
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 9.2e-31 138.3 172 48.3
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 1.3e-29 134.4 186 45.7
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 8.6e-29 131.7 189 43.9
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 1.1e-28 131.3 189 43.9
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 2.5e-28 130.2 148 52.0
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 3.3e-28 129.8 148 52.0
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 3.3e-28 129.8 143 51.7
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 6.2e-27 125.6 189 43.9
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 1.8e-26 124.0 189 42.3
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 4.4e-25 119.4 168 44.6
BcaC04g22328 Brassica carinata HOM05D000013 ORTHO05D000011 6.4e-24 115.5 58 91.4
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 4.6e-22 109.4 128 50.0
BcaC05g27972 Brassica carinata HOM05D007694 ORTHO05D039545 5.0e-21 105.9 70 72.9
C05p39740 Brassica napus HOM05D007694 ORTHO05D039545 1.1e-20 104.8 66 75.8
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 1.2e-19 101.3 105 53.3
C09p20570 Brassica napus HOM05D007694 ORTHO05D040657 2.8e-19 100.1 52 88.5
BcaB05g23971 Brassica carinata HOM05D007694 ORTHO05D092126 6.2e-19 99.0 78 62.8
C07p27460 Brassica napus HOM05D007694 ORTHO05D019969 1.8e-18 97.4 99 56.6
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 3.1e-18 96.7 199 35.2
BolC6t39117H Brassica oleracea HOM05D007694 ORTHO05D040657 1.2e-17 94.7 51 84.3
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 1.5e-17 94.4 99 55.6
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 1.5e-17 94.4 99 55.6
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 2.0e-17 94.0 102 52.0
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 7.5e-17 92.0 150 39.3
BcaC05g28459 Brassica carinata HOM05D007694 ORTHO05D092653 1.3e-16 91.3 68 66.2
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 1.3e-16 91.3 99 54.5
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 4.9e-16 89.4 99 53.5
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 2.4e-15 87.0 89 49.4
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 2.4e-15 87.0 102 52.9
C01p52730 Brassica napus HOM05D009681 ORTHO05D013235 4.1e-15 86.3 242 32.6
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 9.2e-15 85.1 249 31.3
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 2.7e-14 83.6 235 31.1
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 2.7e-14 83.6 183 32.8
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 1.3e-13 81.3 151 37.7
BcaC02g10860 Brassica carinata HOM05D009681 ORTHO05D013235 5.1e-13 79.3 186 34.9
BcaB03g15520 Brassica carinata HOM05D009681 ORTHO05D013235 1.1e-12 78.2 214 32.7
BcaB01g05936 Brassica carinata HOM05D009681 ORTHO05D013235 1.5e-12 77.8 132 40.2
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 2.5e-12 77.0 101 44.6
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 2.5e-12 77.0 101 44.6
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 2.5e-12 77.0 155 34.2
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 3.3e-12 76.6 99 44.4
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 3.3e-12 76.6 99 44.4
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 5.6e-12 75.9 101 43.6
C03p14360 Brassica napus HOM05D009681 ORTHO05D013235 9.5e-12 75.1 230 31.3
BcaC01g03734 Brassica carinata HOM05D009681 ORTHO05D013235 1.2e-11 74.7 187 34.2
BcaC01g04122 Brassica carinata HOM05D009681 ORTHO05D013235 2.1e-11 73.9 124 41.1
BcaNung03237 Brassica carinata HOM05D007694 ORTHO05D092031 3.6e-11 73.2 61 63.9
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 4.7e-11 72.8 99 43.4
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 4.7e-11 72.8 88 51.1
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 6.2e-11 72.4 167 31.1
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 8.1e-11 72.0 85 50.6
BcaB03g14933 Brassica carinata HOM05D007694 ORTHO05D095207 3.1e-10 70.1 66 54.5
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 4.0e-10 69.7 99 41.4
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 5.2e-10 69.3 197 31.0
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 1.2e-09 68.2 78 48.7
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 1.2e-09 68.2 78 48.7
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 1.5e-09 67.8 81 43.2
A09p45490 Brassica napus HOM05D009681 ORTHO05D013235 1.7e-08 64.3 119 38.7
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 2.9e-08 63.5 58 56.9
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 2.9e-08 63.5 58 56.9
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 3.8e-08 63.2 59 54.2
BraA09t40010Z Brassica rapa HOM05D009681 ORTHO05D013235 4.9e-08 62.8 119 37.8
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 6.4e-08 62.4 78 44.9
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 8.4e-08 62.0 75 49.3
A02p13980 Brassica napus HOM05D007694 ORTHO05D098099 1.4e-07 61.2 53 64.2


User provided reference genes

Program Settings