Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p28240 Brassica napus HOM05D009821 ORTHO05D005964 0.0e+00 1702.6 879 100.0
BraA06t25767Z Brassica rapa HOM05D009821 ORTHO05D005964 0.0e+00 1702.6 879 100.0
BcaB02g09591 Brassica carinata HOM05D009821 ORTHO05D005964 0.0e+00 1370.1 904 82.5
C03p65560 Brassica napus HOM05D009821 ORTHO05D005964 0.0e+00 1368.2 904 82.5
BolC3t18811H Brassica oleracea HOM05D009821 ORTHO05D005964 0.0e+00 1362.4 911 82.4
BcaC01g02410 Brassica carinata HOM05D009821 ORTHO05D005964 0.0e+00 1361.7 904 82.2
Sp5g12600 Schrenkiella parvula HOM05D009821 ORTHO05D005964 4.9e-288 994.6 937 64.6
Carub.0005s1582 Capsella rubella HOM05D009821 ORTHO05D005964 1.9e-279 966.1 959 62.5
CARHR158490 Cardamine hirsuta HOM05D009821 ORTHO05D005964 3.9e-277 958.4 957 63.1
AL5G29280 Arabidopsis lyrata HOM05D009821 ORTHO05D005964 3.2e-263 912.1 948 60.1
AT3G49490 Arabidopsis thaliana HOM05D009821 ORTHO05D005964 2.7e-262 909.1 967 60.1
BcaB05g23119 Brassica carinata HOM05D009821 ORTHO05D005964 7.4e-252 874.4 937 58.6
BcaB01g00702 Brassica carinata HOM05D009821 ORTHO05D005964 3.1e-242 842.4 924 60.7
C01p30840 Brassica napus HOM05D009821 ORTHO05D005964 6.5e-232 808.1 935 55.8
BcaC09g49952 Brassica carinata HOM05D009821 ORTHO05D005964 4.4e-220 768.8 934 54.4
BolC1t03016H Brassica oleracea HOM05D009821 ORTHO05D005964 6.3e-219 765.0 892 55.6
A01p24720 Brassica napus HOM05D009821 ORTHO05D005964 2.1e-206 723.4 923 52.1
BraA01t02384Z Brassica rapa HOM05D009821 ORTHO05D005964 2.1e-206 723.4 923 52.1
BolC8t50069H Brassica oleracea HOM05D009821 ORTHO05D005964 1.9e-199 700.3 934 54.2
C08p24510 Brassica napus HOM05D009821 ORTHO05D005964 3.3e-199 699.5 934 54.1
BcaC07g39413 Brassica carinata HOM05D009821 ORTHO05D005964 1.2e-188 664.5 920 52.7
A06p18270 Brassica napus HOM05D009821 ORTHO05D005964 7.5e-180 635.2 931 51.7
BraA06t24910Z Brassica rapa HOM05D009821 ORTHO05D005964 1.7e-179 634.0 936 51.0
THA.LOC104799674 Tarenaya hassleriana HOM05D009821 ORTHO05D005964 4.4e-111 406.8 1054 36.5
Aa31LG11G3790 Aethionema arabicum HOM05D009821 ORTHO05D005964 4.8e-102 376.7 925 36.9
Duzib205G0597 Durio zibethinus HOM05D006657 ORTHO05D005964 8.7e-27 126.7 311 34.1
THA.LOC104803312 Tarenaya hassleriana HOM05D009821 ORTHO05D005964 1.8e-24 119.0 191 41.4
Duzib068G0081 Durio zibethinus HOM05D006657 ORTHO05D005964 6.5e-22 110.5 255 31.0
Duzib084G0166 Durio zibethinus HOM05D006657 ORTHO05D005964 2.1e-20 105.5 251 31.9
Gorai.004G125800 Gossypium raimondii HOM05D006657 ORTHO05D005964 2.1e-20 105.5 303 27.4
Thecc.03G210000 Theobroma cacao HOM05D006657 ORTHO05D005964 1.8e-19 102.4 369 29.3
Dinv17292 Davidia involucrata HOM05D006657 ORTHO05D005964 3.0e-19 101.7 303 31.0
Gohir.D08G117100 Gossypium hirsutum HOM05D006657 ORTHO05D005964 3.0e-19 101.7 504 26.2
COL.COLO4_14382 Corchorus olitorius HOM05D006657 ORTHO05D005964 1.1e-18 99.8 186 34.9
Sabra12G0008600 Salix brachista HOM05D006657 ORTHO05D005964 1.9e-18 99.0 391 26.3
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 2.5e-18 98.6 218 35.3
Lalb_Chr23g0272001 Lupinus albus HOM05D006657 ORTHO05D005964 1.3e-17 96.3 343 27.4
Sabra12G0004100 Salix brachista HOM05D006657 ORTHO05D005964 4.8e-17 94.4 430 24.9
Atru.chr12.2479 Acer truncatum HOM05D006657 ORTHO05D005964 6.3e-17 94.0 231 32.9
Potri.012G007000 Populus trichocarpa HOM05D006657 ORTHO05D005964 8.2e-17 93.6 390 25.1
Potri.015G003700 Populus trichocarpa HOM05D006657 ORTHO05D005964 1.8e-16 92.4 242 28.9
FAN10G2847 Fragaria x ananassa HOM05D006657 ORTHO05D005964 2.0e-15 89.0 263 28.5
Dinv29204 Davidia involucrata HOM05D006657 ORTHO05D005964 3.4e-15 88.2 290 28.6
FAN10G1617 Fragaria x ananassa HOM05D006657 ORTHO05D005964 5.9e-15 87.4 210 31.0
TWI14G0251 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 7.6e-15 87.0 323 25.4
CANSAT21G0900 Cannabis sativa HOM05D006657 ORTHO05D005964 1.0e-14 86.7 287 28.2
FvH4_7g33030 Fragaria vesca HOM05D006657 ORTHO05D005964 1.0e-14 86.7 210 30.5
FAN01G2018 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.3e-14 86.3 210 31.0
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 1.3e-14 86.3 727 23.1
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.7e-14 85.9 363 28.7
Prupe.2G320100 Prunus persica HOM05D006657 ORTHO05D005964 2.2e-14 85.5 319 27.9
RcHm_v2.0_Chr1g0383041 Rosa chinensis HOM05D006657 ORTHO05D005964 2.2e-14 85.5 226 28.8
Glyma.04G227100 Glycine max HOM05D006657 ORTHO05D005964 2.9e-14 85.1 464 24.6
Actinidia34275 Actinidia chinensis HOM05D006657 ORTHO05D005964 6.5e-14 84.0 244 29.5
MD01G1229500 Malus domestica HOM05D006657 ORTHO05D005964 6.5e-14 84.0 222 31.5
Ciclev10018632m.g Citrus clementina HOM05D006657 ORTHO05D005964 8.5e-14 83.6 306 27.1
FAN03G1526 Fragaria x ananassa HOM05D006657 ORTHO05D005964 8.5e-14 83.6 208 30.3
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 1.4e-13 82.8 234 28.2
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 1.9e-13 82.4 225 30.2
Manes.01G044100 Manihot esculenta HOM05D006657 ORTHO05D005964 4.2e-13 81.3 488 24.8
SalBow4G2934 Salvia bowleyana HOM05D006657 ORTHO05D005964 4.2e-13 81.3 253 26.9
SGA_v2.0_scaffold44G16853 Striga asiatica HOM05D006657 ORTHO05D005964 4.2e-13 81.3 181 32.0
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 4.2e-13 81.3 239 28.0
Phvul.009G038600 Phaseolus vulgaris HOM05D006657 ORTHO05D005964 7.2e-13 80.5 245 27.3
Rhsim03G0216600 Rhododendron simsii HOM05D006657 ORTHO05D005964 7.2e-13 80.5 256 28.5
SalBow4G2342 Salvia bowleyana HOM05D006657 ORTHO05D005964 7.2e-13 80.5 253 27.7
Cc07_g20200 Coffea canephora HOM05D006657 ORTHO05D005964 1.2e-12 79.7 464 27.2
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 2.1e-12 79.0 214 30.4
Cpa.g.sc9.388 Carica papaya HOM05D006657 ORTHO05D005964 2.7e-12 78.6 112 43.8
Eucgr.K00044 Eucalyptus grandis HOM05D006657 ORTHO05D005964 2.7e-12 78.6 190 30.0
VMungo1309G0886 Vigna mungo HOM05D006657 ORTHO05D005964 2.7e-12 78.6 205 31.7
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 4.6e-12 77.8 296 25.3
Cpa.g.sc3.164 Carica papaya HOM05D006657 ORTHO05D005964 4.6e-12 77.8 60 61.7
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea HOM05D006657 ORTHO05D005964 7.9e-12 77.0 204 32.4
vmacro10166 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 7.9e-12 77.0 186 31.7
MD07G1301500 Malus domestica HOM05D006657 ORTHO05D005964 1.0e-11 76.6 354 26.0
Psat5g071280 Pisum sativum HOM05D006657 ORTHO05D005964 1.0e-11 76.6 257 27.2
PGSC0003DMG400000558 Solanum tuberosum HOM05D006657 ORTHO05D005964 1.0e-11 76.6 232 29.7
QL09p006779 Quercus lobata HOM05D006657 ORTHO05D005964 1.3e-11 76.3 527 23.7
Sed0019147 Sechium edule HOM05D006657 ORTHO05D005964 1.3e-11 76.3 295 25.4
ECA233G2144 Erigeron canadensis HOM05D006657 ORTHO05D005964 1.8e-11 75.9 160 30.6
Sabra15G0002400 Salix brachista HOM05D006657 ORTHO05D005964 1.8e-11 75.9 241 28.2
TAR629G3494 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.8e-11 75.9 134 38.8
SGA_v2.0_scaffold18G08476 Striga asiatica HOM05D006657 ORTHO05D005964 3.9e-11 74.7 310 24.2
Peaxi162Scf00912g00114 Petunia axillaris HOM05D006657 ORTHO05D005964 5.1e-11 74.3 214 29.4
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 6.7e-11 73.9 199 31.2
CiPaw.06G040100 Carya illinoinensis HOM05D006657 ORTHO05D005964 6.7e-11 73.9 329 24.9
Lalb_Chr11g0067471 Lupinus albus HOM05D006657 ORTHO05D005964 6.7e-11 73.9 475 21.9
Hund23980 Selenicereus undatus HOM05D006657 ORTHO05D005964 6.7e-11 73.9 197 31.5
CsaV3_4G008600 Cucumis sativus L. HOM05D006657 ORTHO05D005964 8.7e-11 73.6 396 24.5
Lj1g0002697 Lotus japonicus HOM05D006657 ORTHO05D005964 8.7e-11 73.6 199 29.1
Oeu055400.1 Olea europaea HOM05D006657 ORTHO05D005964 1.1e-10 73.2 219 29.2
Solyc03g080140.3 Solanum lycopersicum HOM05D006657 ORTHO05D005964 1.5e-10 72.8 228 27.6
AUR62028098 Chenopodium quinoa HOM05D006657 ORTHO05D005964 2.5e-10 72.0 313 25.2
Eucgr.A00967 Eucalyptus grandis HOM05D006657 ORTHO05D005964 2.5e-10 72.0 209 29.7
HanXRQChr08g0226001 Helianthus annuus HOM05D006657 ORTHO05D005964 2.5e-10 72.0 205 31.7
unitig_0.g2439 Utricularia gibba HOM05D006657 ORTHO05D005964 2.5e-10 72.0 346 24.3
Potri.001G452300 Populus trichocarpa HOM05D011672 ORTHO05D011012 7.4e-10 70.5 196 27.0
Sopen03g021870 Solanum pennellii HOM05D006657 ORTHO05D005964 7.4e-10 70.5 226 27.4
PGR042G1854 Punica granatum HOM05D006657 ORTHO05D005964 1.3e-09 69.7 74 45.9
CiPaw.05G206100 Carya illinoinensis HOM05D006657 ORTHO05D005964 1.6e-09 69.3 235 27.2
TWI23G1261 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 1.6e-09 69.3 306 23.5
Aqoxy5G04358 Aquilegia oxysepala HOM05D006657 ORTHO05D005964 2.2e-09 68.9 233 29.6
Rhsim09G0210400 Rhododendron simsii HOM05D006657 ORTHO05D005964 2.2e-09 68.9 261 27.2
Ah.07g204540 Amaranthus hybridus HOM05D006657 ORTHO05D005964 2.8e-09 68.6 338 26.9
Glyma.06G138000 Glycine max HOM05D006657 ORTHO05D005964 2.8e-09 68.6 198 30.3
Haze_00307 Corylus avellana HOM05D006657 ORTHO05D005964 4.8e-09 67.8 436 24.8
Sc13g0010540 Simmondsia chinensis HOM05D006657 ORTHO05D005964 6.3e-09 67.4 276 27.2
AUR62005972 Chenopodium quinoa HOM05D006657 ORTHO05D005964 8.2e-09 67.0 457 23.6
Lsat_1_v5_gn_2_134840 Lactuca sativa HOM05D006657 ORTHO05D005964 1.1e-08 66.6 166 32.5
DCAR_020382 Daucus carota HOM05D006657 ORTHO05D005964 1.8e-08 65.9 207 27.1
MSTRG.26967 Avicennia marina HOM05D006657 ORTHO05D005964 2.4e-08 65.5 287 25.4
Cc00_g14340 Coffea canephora HOM05D006657 ORTHO05D005964 2.4e-08 65.5 67 49.3
Cfa016147 Carpinus fangiana HOM05D006657 ORTHO05D005964 5.3e-08 64.3 465 23.4
Sabra16G0305400 Salix brachista HOM05D011672 ORTHO05D011012 6.9e-08 63.9 175 28.0
Ca_16789_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 9.1e-08 63.5 451 22.6
Ca_16805_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 9.1e-08 63.5 451 22.6
DCAR_008990 Daucus carota HOM05D006657 ORTHO05D005964 9.1e-08 63.5 206 27.2
Nitab4.5_0006821g0010 Nicotiana tabacum HOM05D006657 ORTHO05D005964 2.0e-07 62.4 227 29.1
Ah.13g070870 Amaranthus hybridus HOM05D006657 ORTHO05D005964 3.4e-07 61.6 187 27.8
EL10Ac3g05155 Beta vulgaris HOM05D006657 ORTHO05D005964 4.5e-07 61.2 170 28.2
Nitab4.5_0000021g0080 Nicotiana tabacum HOM05D006657 ORTHO05D005964 4.5e-07 61.2 227 29.5
Medtr3g093000 Medicago truncatula HOM05D006657 ORTHO05D005964 7.7e-07 60.5 52 53.8
CDE02G0079 Ceratophyllum demersum HOM05D006657 ORTHO05D005964 1.0e-06 60.1 288 24.3
TPR.G33400 Trifolium pratense HOM05D006657 ORTHO05D005964 1.0e-06 60.1 268 23.5
Migut.F00140 Erythranthe guttata HOM05D006657 ORTHO05D005964 3.8e-06 58.2 448 23.2
ATR0579G071 Amborella trichopoda HOM05D006657 ORTHO05D005964 6.5e-06 57.4 237 24.5


User provided reference genes

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