Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p27250 Brassica napus HOM05D003537 ORTHO05D004180 2.0e-60 235.7 135 100.0
A01p25800 Brassica napus HOM05D003537 ORTHO05D004180 2.8e-33 145.6 94 90.4
BraA01t02496Z Brassica rapa HOM05D003537 ORTHO05D004180 2.8e-33 145.6 94 90.4
BraA06t25666Z Brassica rapa HOM05D003537 ORTHO05D004180 8.9e-32 140.6 96 88.5
Sp5g14270 Schrenkiella parvula HOM05D003537 ORTHO05D004180 2.6e-31 139.0 96 86.5
BolC1t03207H Brassica oleracea HOM05D003537 ORTHO05D004180 1.7e-30 136.3 94 88.3
BcaB02g10692 Brassica carinata HOM05D003537 ORTHO05D004180 2.9e-30 135.6 96 85.4
BcaC01g02287 Brassica carinata HOM05D003537 ORTHO05D004180 8.4e-30 134.0 97 74.2
Thhalv10010812m.g Eutrema salsugineum HOM05D003537 ORTHO05D004180 4.2e-29 131.7 96 84.4
BcaB01g00893 Brassica carinata HOM05D003537 ORTHO05D004180 7.1e-29 131.0 96 65.6
BcaC09g49812 Brassica carinata HOM05D003537 ORTHO05D004180 2.7e-28 129.0 94 85.1
C01p32690 Brassica napus HOM05D003537 ORTHO05D004180 2.7e-28 129.0 94 85.1
BcaB05g23065 Brassica carinata HOM05D003537 ORTHO05D004180 4.6e-28 128.3 94 83.0
AL5G26940 Arabidopsis lyrata HOM05D003537 ORTHO05D004180 2.3e-27 125.9 97 62.9
A06p19950 Brassica napus HOM05D003537 ORTHO05D004180 5.1e-27 124.8 93 80.6
BraA06t25078Z Brassica rapa HOM05D003537 ORTHO05D004180 5.1e-27 124.8 93 80.6
BcaC01g01786 Brassica carinata HOM05D003537 ORTHO05D004180 6.6e-27 124.4 96 78.1
AT3G47650 Arabidopsis thaliana HOM05D003537 ORTHO05D004180 1.1e-26 123.6 97 77.3
CARHR156330 Cardamine hirsuta HOM05D003537 ORTHO05D004180 2.5e-26 122.5 96 74.0
Aa31LG8G16720 Aethionema arabicum HOM05D003537 ORTHO05D004180 8.1e-25 117.5 96 62.5
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 1.2e-23 113.6 97 70.1
Atru.chr7.1160 Acer truncatum HOM05D003537 ORTHO05D004180 5.8e-23 111.3 91 71.4
Potri.018G068300 Populus trichocarpa HOM05D003537 ORTHO05D004180 5.8e-23 111.3 107 54.2
Glyma.04G147800 Glycine max HOM05D003537 ORTHO05D004180 7.6e-23 110.9 92 72.8
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 1.3e-22 110.2 88 58.0
C03p71880 Brassica napus HOM05D003537 ORTHO05D004180 1.3e-22 110.2 96 72.9
HPP92_000667 Vanilla planifolia HOM05D003537 ORTHO05D004180 1.7e-22 109.8 89 75.3
Nitab4.5_0010481g0030 Nicotiana tabacum HOM05D003537 ORTHO05D004180 2.9e-22 109.0 126 54.0
TWI34G1168 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 3.8e-22 108.6 132 56.1
Manes.06G058601 Manihot esculenta HOM05D003537 ORTHO05D004180 4.9e-22 108.2 95 54.7
Nitab4.5_0002658g0060 Nicotiana tabacum HOM05D003537 ORTHO05D004180 4.9e-22 108.2 126 50.0
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 6.4e-22 107.8 124 49.2
Eucgr.C01175 Eucalyptus grandis HOM05D003537 ORTHO05D004180 1.1e-21 107.1 91 54.9
Lalb_Chr07g0178961 Lupinus albus HOM05D003537 ORTHO05D004180 1.1e-21 107.1 87 75.9
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.1e-21 107.1 89 74.2
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 1.9e-21 106.3 91 53.8
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 1.9e-21 106.3 86 57.0
Peaxi162Scf00157g01525 Petunia axillaris HOM05D003537 ORTHO05D004180 1.9e-21 106.3 125 54.4
THA.LOC104815279 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 1.9e-21 106.3 101 66.3
CsaV3_2G002870 Cucumis sativus L. HOM05D003537 ORTHO05D004180 3.2e-21 105.5 88 59.1
Solyc12g009440.2 Solanum lycopersicum HOM05D003537 ORTHO05D004180 3.2e-21 105.5 89 71.9
Sopen12g004440 Solanum pennellii HOM05D003537 ORTHO05D004180 3.2e-21 105.5 89 71.9
arahy.Tifrunner.gnm1.ann1.4IXQ36 Arachis hypogaea HOM05D003537 ORTHO05D004180 4.2e-21 105.1 90 64.4
arahy.Tifrunner.gnm1.ann1.EPB35R Arachis hypogaea HOM05D003537 ORTHO05D004180 4.2e-21 105.1 90 64.4
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 4.2e-21 105.1 90 64.4
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 4.2e-21 105.1 96 55.2
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 4.2e-21 105.1 97 54.6
Nn2g12030 Nelumbo nucifera HOM05D003537 ORTHO05D004180 4.2e-21 105.1 97 68.0
Sed0005083 Sechium edule HOM05D003537 ORTHO05D004180 7.1e-21 104.4 100 62.0
ClCG11G003050 Citrullus lanatus HOM05D003537 ORTHO05D004180 9.3e-21 104.0 88 70.5
Gohir.A06G055900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.2e-20 103.6 97 54.6
Gohir.D06G054550 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.2e-20 103.6 97 54.6
Glyma.17G114800 Glycine max HOM05D003537 ORTHO05D004180 2.1e-20 102.8 124 46.0
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 2.7e-20 102.4 114 53.5
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 2.7e-20 102.4 123 48.8
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 3.5e-20 102.1 97 52.6
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 3.5e-20 102.1 97 52.6
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 4.6e-20 101.7 97 52.6
THA.LOC104808988 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 4.6e-20 101.7 122 53.3
Medtr4g114180 Medicago truncatula HOM05D003537 ORTHO05D004180 6.0e-20 101.3 124 45.2
Carub.0005s1378 Capsella rubella HOM05D003537 ORTHO05D004180 1.3e-19 100.1 90 73.3
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 1.3e-19 100.1 125 47.2
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 1.3e-19 100.1 91 68.1
GSVIVG01015532001 Vitis vinifera HOM05D003537 ORTHO05D004180 1.3e-19 100.1 96 54.2
Oeu018469.1 Olea europaea HOM05D003537 ORTHO05D004180 2.3e-19 99.4 93 67.7
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 5.1e-19 98.2 97 52.6
AUR62011130 Chenopodium quinoa HOM05D003537 ORTHO05D004180 8.7e-19 97.4 91 67.0
AUR62013357 Chenopodium quinoa HOM05D003537 ORTHO05D004180 8.7e-19 97.4 91 67.0
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 8.7e-19 97.4 91 51.6
FvH4_1g03260 Fragaria vesca HOM05D003537 ORTHO05D004180 8.7e-19 97.4 91 67.0
FAN19G1671 Fragaria x ananassa HOM05D003537 ORTHO05D004180 8.7e-19 97.4 91 67.0
Lsat_1_v5_gn_8_58621 Lactuca sativa HOM05D003537 ORTHO05D004180 8.7e-19 97.4 82 58.5
FAN23G0028 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.1e-18 97.1 89 53.9
QL02p021910 Quercus lobata HOM05D003537 ORTHO05D004180 1.1e-18 97.1 95 50.5
SGA_v2.0_scaffold12G06124 Striga asiatica HOM05D003537 ORTHO05D004180 1.1e-18 97.1 117 45.3
FAN28G2448 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.5e-18 96.7 91 65.9
RcHm_v2.0_Chr2g0088401 Rosa chinensis HOM05D003537 ORTHO05D004180 1.9e-18 96.3 136 52.9
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 3.3e-18 95.5 91 65.9
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 3.3e-18 95.5 99 45.5
Prupe.7G243100 Prunus persica HOM05D003537 ORTHO05D004180 3.3e-18 95.5 134 53.0
Migut.K00479 Erythranthe guttata HOM05D003537 ORTHO05D004180 5.6e-18 94.7 91 52.7
unitig_26.g9662 Utricularia gibba HOM05D003537 ORTHO05D004180 5.6e-18 94.7 82 57.3
Ca_21681_v3 Cicer arietinum L. HOM05D003537 ORTHO05D004180 7.4e-18 94.4 87 51.7
MSTRG.21979 Avicennia marina HOM05D003537 ORTHO05D004180 9.6e-18 94.0 99 44.4
Nn8g39452 Nelumbo nucifera HOM05D003537 ORTHO05D004180 9.6e-18 94.0 91 63.7
Eucgr.C02783 Eucalyptus grandis HOM05D003537 ORTHO05D004180 1.3e-17 93.6 90 56.7
Gohir.A06G143050 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.3e-17 93.6 97 50.5
MD02G1031600 Malus domestica HOM05D003537 ORTHO05D004180 1.3e-17 93.6 97 49.5
Gorai.010G063900 Gossypium raimondii HOM05D003537 ORTHO05D004180 1.6e-17 93.2 97 50.5
Psat4g040120 Pisum sativum HOM05D003537 ORTHO05D004180 1.6e-17 93.2 124 47.6
ECA240G1743 Erigeron canadensis HOM05D003537 ORTHO05D004180 2.1e-17 92.8 96 61.5
Potri.018G028500 Populus trichocarpa HOM05D003537 ORTHO05D004180 2.1e-17 92.8 90 63.3
arahy.Tifrunner.gnm1.ann1.DMU7Q7 Arachis hypogaea HOM05D003537 ORTHO05D004180 3.6e-17 92.0 95 49.5
MD15G1173100 Malus domestica HOM05D003537 ORTHO05D004180 3.6e-17 92.0 125 56.8
Phvul.003G164500 Phaseolus vulgaris HOM05D003537 ORTHO05D004180 3.6e-17 92.0 112 59.8
Sabra18G0030700 Salix brachista HOM05D003537 ORTHO05D004180 3.6e-17 92.0 82 67.1
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 3.6e-17 92.0 133 46.6
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 3.6e-17 92.0 91 58.2
arahy.Tifrunner.gnm1.ann1.9FI3T7 Arachis hypogaea HOM05D003537 ORTHO05D004180 4.8e-17 91.7 95 49.5
CDE06G2093 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 4.8e-17 91.7 85 68.2
Ciclev10009876m.g Citrus clementina HOM05D003537 ORTHO05D004180 4.8e-17 91.7 96 49.0
Migut.K00478 Erythranthe guttata HOM05D003537 ORTHO05D004180 4.8e-17 91.7 100 47.0
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 6.2e-17 91.3 91 51.6
Lj4g0026965 Lotus japonicus HOM05D003537 ORTHO05D004180 6.2e-17 91.3 99 48.5
CANSAT25G1571 Cannabis sativa HOM05D003537 ORTHO05D004180 8.1e-17 90.9 80 53.8
Pp3c18_21980 Physcomitrium patens HOM05D003537 ORTHO05D004180 8.1e-17 90.9 74 56.8
Glyma.06G222000 Glycine max HOM05D003537 ORTHO05D004180 1.4e-16 90.1 123 53.7
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 2.4e-16 89.4 101 49.5
MBI01_g36269_MAGBIO Magnolia biondii HOM05D003537 ORTHO05D004180 2.4e-16 89.4 92 65.2
Rhsim01G0071100 Rhododendron simsii HOM05D003537 ORTHO05D004180 2.4e-16 89.4 92 64.1
RhsimUnG0194700 Rhododendron simsii HOM05D003537 ORTHO05D004180 2.4e-16 89.4 92 64.1
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 3.1e-16 89.0 97 49.5
C03p67010 Brassica napus HOM05D003537 ORTHO05D004180 5.3e-16 88.2 96 54.2
BolC3t18976H Brassica oleracea HOM05D003537 ORTHO05D004180 5.3e-16 88.2 96 54.2
COL.COLO4_18845 Corchorus olitorius HOM05D003537 ORTHO05D004180 6.9e-16 87.8 126 40.5
HanXRQChr16g0505371 Helianthus annuus HOM05D003537 ORTHO05D004180 1.2e-15 87.0 102 45.1
VMungo1215G2386 Vigna mungo HOM05D003537 ORTHO05D004180 1.2e-15 87.0 99 59.6
CDE04G0424 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 1.5e-15 86.7 104 59.6
Ah.14g079820 Amaranthus hybridus HOM05D003537 ORTHO05D004180 2.0e-15 86.3 90 48.9
vmacro20557 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 2.6e-15 85.9 93 61.3
SGA_v2.0_scaffold17G08031 Striga asiatica HOM05D003537 ORTHO05D004180 3.4e-15 85.5 80 51.2
Lsat_1_v5_gn_7_45281 Lactuca sativa HOM05D003537 ORTHO05D004180 4.5e-15 85.1 134 39.6
Hund09242 Selenicereus undatus HOM05D003537 ORTHO05D004180 5.8e-15 84.7 93 59.1
Aqoxy7G02181 Aquilegia oxysepala HOM05D003537 ORTHO05D004180 7.6e-15 84.3 92 60.9
ECA246G5170 Erigeron canadensis HOM05D003537 ORTHO05D004180 7.6e-15 84.3 94 46.8
Lalb_Chr13g0301861 Lupinus albus HOM05D003537 ORTHO05D004180 9.9e-15 84.0 107 57.0
Mapoly0035s0118 Marchantia polymorpha HOM05D002896 ORTHO05D003263 9.9e-15 84.0 77 59.7
Os06g0332800 Oryza sativa ssp. japonica HOM05D003537 ORTHO05D004180 1.3e-14 83.6 125 52.8
Peaxi162Scf00256g00035 Petunia axillaris HOM05D003537 ORTHO05D004180 1.3e-14 83.6 107 43.0
PSO170G5454 Papaver somniferum HOM05D003537 ORTHO05D004180 1.7e-14 83.2 96 47.9
SMO145G0190 Selaginella moellendorffii HOM05D003537 ORTHO05D004180 1.7e-14 83.2 69 53.6
TPR.G10724 Trifolium pratense HOM05D003537 ORTHO05D004180 2.9e-14 82.4 99 44.4
ATR1120G202 Amborella trichopoda HOM05D003537 ORTHO05D004180 4.9e-14 81.6 93 45.2
PSO455G0045 Papaver somniferum HOM05D003537 ORTHO05D004180 4.9e-14 81.6 110 43.6
Dinv18245 Davidia involucrata HOM05D003537 ORTHO05D004180 8.4e-14 80.9 95 53.7
GSVIVG01015534001 Vitis vinifera HOM05D003537 ORTHO05D004180 8.4e-14 80.9 59 62.7
Oeu007500.1 Olea europaea HOM05D003537 ORTHO05D004180 1.1e-13 80.5 93 61.3
vmacro23102 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 1.1e-13 80.5 83 65.1
FAN26G0344 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.4e-13 80.1 59 64.4
CiPaw.08G011800 Carya illinoinensis HOM05D003537 ORTHO05D004180 3.2e-13 79.0 103 54.4
Psat0s2233g0360 Pisum sativum HOM05D003537 ORTHO05D004180 3.2e-13 79.0 102 46.1
Thecc.09G026400 Theobroma cacao HOM05D003537 ORTHO05D004180 3.2e-13 79.0 123 48.0
VMungo1309G0037 Vigna mungo HOM05D003537 ORTHO05D004180 3.2e-13 79.0 90 44.4
Atru.BG.3.p Acer truncatum HOM05D003537 ORTHO05D004180 4.2e-13 78.6 68 52.9
Cpa.g.sc259.5 Carica papaya HOM05D003537 ORTHO05D004180 4.2e-13 78.6 80 65.0
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 4.2e-13 78.6 91 47.3
CsaV3_3G046470 Cucumis sativus L. HOM05D003537 ORTHO05D004180 5.5e-13 78.2 82 46.3
Lalb_Chr08g0244061 Lupinus albus HOM05D003537 ORTHO05D004180 5.5e-13 78.2 90 57.8
CSS0014531 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 7.1e-13 77.8 100 40.0
Glyma.06G069100 Glycine max HOM05D003537 ORTHO05D004180 9.3e-13 77.4 81 64.2
GSVIVG01035845001 Vitis vinifera HOM05D003537 ORTHO05D004180 9.3e-13 77.4 80 65.0
Haze_21529 Corylus avellana HOM05D003537 ORTHO05D004180 1.2e-12 77.0 103 39.8
Dinv15950 Davidia involucrata HOM05D003537 ORTHO05D004180 1.2e-12 77.0 80 58.8
Manes.16G121200 Manihot esculenta HOM05D003537 ORTHO05D004180 1.2e-12 77.0 90 57.8
ClCG05G016980 Citrullus lanatus HOM05D003537 ORTHO05D004180 2.1e-12 76.3 82 51.2
Ciclev10009875m.g Citrus clementina HOM05D003537 ORTHO05D004180 2.1e-12 76.3 94 54.3
Glyma.04G067500 Glycine max HOM05D003537 ORTHO05D004180 2.7e-12 75.9 78 62.8
Lj1g0012711 Lotus japonicus HOM05D003537 ORTHO05D004180 3.5e-12 75.5 91 45.1
Gorai.010G114400 Gossypium raimondii HOM05D003537 ORTHO05D004180 4.6e-12 75.1 81 49.4
Gohir.A06G098204 Gossypium hirsutum HOM05D003537 ORTHO05D004180 7.9e-12 74.3 132 38.6
Medtr3g107397 Medicago truncatula HOM05D003537 ORTHO05D004180 7.9e-12 74.3 82 52.4
TPR.G3106 Trifolium pratense HOM05D003537 ORTHO05D004180 7.9e-12 74.3 82 53.7
MELO3C004506.2 Cucumis melo HOM05D003537 ORTHO05D004180 1.8e-11 73.2 101 43.6
HanXRQChr09g0242821 Helianthus annuus HOM05D003537 ORTHO05D004180 1.8e-11 73.2 113 53.1
PGR044G0105 Punica granatum HOM05D003537 ORTHO05D004180 3.0e-11 72.4 96 54.2
Sed0007274 Sechium edule HOM05D003537 ORTHO05D004180 3.0e-11 72.4 75 45.3
RcHm_v2.0_Chr6g0298061 Rosa chinensis HOM05D003537 ORTHO05D004180 3.9e-11 72.0 79 59.5
SalBow1G5494 Salvia bowleyana HOM05D003537 ORTHO05D004180 1.9e-10 69.7 66 53.0
DCAR_003091 Daucus carota HOM05D003537 ORTHO05D004180 2.5e-10 69.3 81 44.4
FvH4_2g29200 Fragaria vesca HOM05D003537 ORTHO05D004180 4.3e-10 68.6 87 52.9
FAN15G0527 Fragaria x ananassa HOM05D003537 ORTHO05D004180 4.3e-10 68.6 87 52.9
Prupe.1G480000 Prunus persica HOM05D003537 ORTHO05D004180 4.3e-10 68.6 88 52.3
Duzib168G0240 Durio zibethinus HOM05D003537 ORTHO05D004180 9.6e-10 67.4 113 40.7
Lsat_1_v5_gn_5_30800 Lactuca sativa HOM05D003537 ORTHO05D004180 9.6e-10 67.4 59 54.2
MD15G1124500 Malus domestica HOM05D003537 ORTHO05D004180 2.8e-09 65.9 69 44.9
FAN27G1347 Fragaria x ananassa HOM05D003537 ORTHO05D004180 6.2e-09 64.7 142 38.7
SEGI_36836 Sequoiadendron giganteum HOM05D003537 ORTHO05D004180 1.1e-08 63.9 81 42.0
Cc08_g00790 Coffea canephora HOM05D003537 ORTHO05D004180 3.1e-08 62.4 86 37.2
Gohir.D08G087900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 4.0e-08 62.0 59 52.5
Gohir.A10G061300 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.6e-07 59.3 31 80.6
CSS0006865 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 5.8e-07 58.2 31 74.2
CSS0026750 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 5.8e-07 58.2 31 74.2
FAN24G0346 Fragaria x ananassa HOM05D003537 ORTHO05D004180 3.8e-06 55.5 53 47.2


User provided reference genes

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