Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p26550 Brassica napus HOM05D020142 ORTHO05D017523 2.1e-79 298.9 143 100.0
A03p09340 Brassica napus HOM05D020142 ORTHO05D017523 1.4e-62 243.0 120 95.8
A05p17840 Brassica napus HOM05D020142 ORTHO05D017523 1.4e-62 243.0 120 95.8
A03p53790 Brassica napus HOM05D020142 ORTHO05D017523 8.8e-62 240.4 120 95.0
BraA03t14446Z Brassica rapa HOM05D020142 ORTHO05D017523 1.6e-55 219.5 121 89.3
BolC2t07240H Brassica oleracea HOM05D027386 ORTHO05D017523 1.9e-32 142.9 136 59.6
BraA03t10253Z Brassica rapa HOM05D020142 ORTHO05D017523 4.1e-19 98.6 48 93.8
BcaB02g10990 Brassica carinata HOM05D000313 ORTHO05D017523 5.8e-13 78.2 87 55.2
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 8.3e-12 74.3 137 35.8
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-11 72.8 136 36.0
BolC4t27877H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-11 72.8 92 43.5
BcaC07g37360 Brassica carinata HOM05D000313 ORTHO05D000065 7.1e-11 71.2 136 35.3
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 7.1e-11 71.2 136 35.3
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-10 70.5 136 35.3
C04p46180 Brassica napus HOM05D034099 ORTHO05D017523 1.6e-10 70.1 117 40.2
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-10 69.7 103 39.8
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-10 68.9 163 30.7
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-10 68.9 163 30.7
BcaC02g07753 Brassica carinata HOM05D000313 ORTHO05D000065 4.6e-10 68.6 136 33.8
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 4.6e-10 68.6 136 35.3
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 4.6e-10 68.6 136 34.6
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 4.6e-10 68.6 136 35.3
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-09 67.4 144 34.0
BolC4t23669H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-09 67.4 106 37.7
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-09 66.6 104 39.4
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-09 66.6 124 37.1
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-09 66.2 163 29.4
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-09 65.5 54 57.4
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 3.9e-09 65.5 54 57.4
BcaB02g11080 Brassica carinata HOM05D000313 ORTHO05D000065 5.1e-09 65.1 54 55.6
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 5.1e-09 65.1 138 31.2
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 5.1e-09 65.1 138 31.2
BraA10t43815Z Brassica rapa HOM05D000313 ORTHO05D000065 5.1e-09 65.1 134 33.6
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-09 64.7 134 35.1
C06p09070 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-09 64.7 90 42.2
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-09 64.7 134 35.1
BcaB01g01233 Brassica carinata HOM05D000313 ORTHO05D000065 8.6e-09 64.3 54 55.6
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 8.6e-09 64.3 163 30.1
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-09 64.3 136 31.6
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-09 64.3 163 30.1
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-08 63.9 54 53.7
BcaC07g37625 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-08 63.9 49 59.2
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-08 63.9 54 53.7
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-08 63.9 54 53.7
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-08 63.9 54 53.7
BolC8t47994H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-08 63.9 49 59.2
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-08 63.5 55 56.4
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-08 63.2 137 32.1
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-08 63.2 136 33.1
BcaC08g44117 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-08 62.8 112 34.8
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-08 62.8 131 32.8
C07p20830 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-08 62.8 98 37.8
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-08 62.8 51 58.8
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-08 62.4 136 30.9
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-08 62.4 50 56.0
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 3.3e-08 62.4 136 34.6
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-08 62.0 136 32.4
BcaC05g27414 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-08 62.0 113 36.3
C03p91860 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-08 62.0 54 51.9
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-08 61.6 121 36.4
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 5.6e-08 61.6 121 36.4
C04p21440 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-08 60.8 52 53.8
A01p17050 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 60.5 50 54.0
BolC2t09854H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-07 60.5 55 49.1
C02p48770 Brassica napus HOM05D000285 ORTHO05D005607 1.6e-07 60.1 105 37.1
A03p45920 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-07 59.7 136 31.6
BcaC01g04173 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-07 59.3 114 39.5
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-07 59.3 50 54.0
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-07 59.3 136 30.1
C03p44260 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-07 59.3 114 39.5
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-07 59.3 48 54.2
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 2.8e-07 59.3 54 50.0
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-07 58.9 55 50.9
C03p69800 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-07 58.9 51 52.9
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-07 58.9 48 54.2
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-07 58.9 136 30.9
C06p50290 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-07 58.9 54 50.0
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-07 58.5 53 50.9
A02p26880 Brassica napus HOM05D000313 ORTHO05D019939 4.7e-07 58.5 56 53.6
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-07 58.5 53 50.9
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-07 58.5 52 51.9
BolC1t03161H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-07 58.5 52 51.9
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-07 58.5 52 51.9
BolC7t43682H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-07 58.5 75 41.3
BraA02t07699Z Brassica rapa HOM05D000313 ORTHO05D019939 4.7e-07 58.5 56 53.6
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 6.2e-07 58.2 164 30.5
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 6.2e-07 58.2 136 30.9
A02p13460 Brassica napus HOM05D000313 ORTHO05D000065 8.1e-07 57.8 50 52.0
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 8.1e-07 57.8 67 46.3
BraA02t06404Z Brassica rapa HOM05D000313 ORTHO05D000065 8.1e-07 57.8 50 52.0
BcaB01g02353 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-06 57.4 62 48.4
BcaC01g01986 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-06 57.4 49 53.1
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-06 57.0 138 29.7
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-06 57.0 174 29.3
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-06 57.0 174 29.3
C01p38920 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-06 56.6 54 51.9
BolC1t03842H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-06 56.6 54 51.9
C09p33280 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-06 55.8 76 42.1
BolC9t56164H Brassica oleracea HOM05D000313 ORTHO05D000065 3.1e-06 55.8 76 42.1
BraA06t24100Z Brassica rapa HOM05D000313 ORTHO05D000065 3.1e-06 55.8 92 38.0
BraA09t40157Z Brassica rapa HOM05D000313 ORTHO05D000065 3.1e-06 55.8 54 50.0
C02p57090 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-06 55.5 108 30.6
C07p00620 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-06 55.5 55 47.3
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-06 55.1 76 39.5
BcaC05g27194 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-06 55.1 48 54.2
BolC5t31824H Brassica oleracea HOM05D000313 ORTHO05D000065 5.2e-06 55.1 48 54.2
BcaC03g13942 Brassica carinata HOM05D000313 ORTHO05D000065 6.8e-06 54.7 157 29.9
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 6.8e-06 54.7 161 29.8
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 6.8e-06 54.7 136 30.1
A09p47000 Brassica napus HOM05D000313 ORTHO05D000065 6.8e-06 54.7 136 30.1
A10p14410 Brassica napus HOM05D000313 ORTHO05D000065 6.8e-06 54.7 55 49.1
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 6.8e-06 54.7 136 30.1
BolC2t09079H Brassica oleracea HOM05D000313 ORTHO05D000065 8.9e-06 54.3 98 35.7


User provided reference genes

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