Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p24320 Brassica napus HOM05D006450 ORTHO05D001777 2.4e-59 231.9 109 100.0
A06p25330 Brassica napus HOM05D006450 ORTHO05D001777 1.3e-52 209.5 108 91.7
A06p24330 Brassica napus HOM05D006450 ORTHO05D001777 2.2e-52 208.8 106 92.5
A09p31260 Brassica napus HOM05D006450 ORTHO05D001777 1.3e-49 199.5 110 88.2
A06p25420 Brassica napus HOM05D006450 ORTHO05D001777 2.2e-49 198.7 108 87.0
A07p06160 Brassica napus HOM05D006450 ORTHO05D001777 2.2e-49 198.7 108 87.0
A05p22370 Brassica napus HOM05D006450 ORTHO05D001777 2.9e-49 198.4 115 84.3
A06p24400 Brassica napus HOM05D006450 ORTHO05D001777 2.9e-49 198.4 115 84.3
A06p24520 Brassica napus HOM05D006450 ORTHO05D001777 5.5e-48 194.1 108 87.0
A06p23620 Brassica napus HOM05D006450 ORTHO05D001777 5.7e-45 184.1 108 83.3
BNapus_Darmor_BZH_scaffold_107p00140 Brassica napus HOM05D006450 ORTHO05D001777 1.2e-42 176.4 108 80.6
BNapus_Darmor_BZH_scaffold_107p00070 Brassica napus HOM05D006450 ORTHO05D001777 1.6e-42 176.0 89 92.1
BNapus_Darmor_BZH_scaffold_192p00010 Brassica napus HOM05D006450 ORTHO05D001777 1.0e-41 173.3 87 92.0
A06p23730 Brassica napus HOM05D006450 ORTHO05D001777 2.9e-41 171.8 108 77.8
A06p24890 Brassica napus HOM05D006450 ORTHO05D001777 3.8e-41 171.4 108 78.7
A09p31040 Brassica napus HOM05D006450 ORTHO05D001777 1.2e-37 159.8 108 74.1
A06p24610 Brassica napus HOM05D006450 ORTHO05D001777 4.4e-37 157.9 79 93.7
A06p23840 Brassica napus HOM05D006450 ORTHO05D001777 1.3e-36 156.4 78 93.6
A09p30950 Brassica napus HOM05D006450 ORTHO05D001777 8.2e-36 153.7 79 91.1
A05p22240 Brassica napus HOM05D006450 ORTHO05D001777 1.8e-35 152.5 79 89.9
A06p23850 Brassica napus HOM05D006450 ORTHO05D001777 3.5e-34 148.3 78 88.5
arahy.Tifrunner.gnm1.ann1.W08C9D Arachis hypogaea HOM05D006450 ORTHO05D001777 4.5e-34 147.9 111 71.2
A06p24560 Brassica napus HOM05D006450 ORTHO05D001777 5.9e-34 147.5 79 89.9
A06p23720 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-32 143.3 70 94.3
A06p23660 Brassica napus HOM05D006450 ORTHO05D001777 1.5e-32 142.9 72 91.7
A06p24630 Brassica napus HOM05D006450 ORTHO05D001777 4.7e-31 137.9 70 91.4
Sc14g0004240 Simmondsia chinensis HOM05D006450 ORTHO05D001777 2.3e-30 135.6 89 74.2
BNapus_Darmor_BZH_scaffold_107p00040 Brassica napus HOM05D000099 ORTHO05D000205 1.7e-28 129.4 65 90.8
A05p22630 Brassica napus HOM05D000099 ORTHO05D000205 2.2e-28 129.0 91 73.6
A06p25060 Brassica napus HOM05D000099 ORTHO05D000205 1.1e-27 126.7 65 87.7
CAN.G13509.1 Capsicum annuum HOM05D007851 ORTHO05D007849 1.1e-27 126.7 89 69.7
arahy.Tifrunner.gnm1.ann1.XK9GFX Arachis hypogaea HOM05D006450 ORTHO05D001777 3.1e-27 125.2 117 60.7
BNapus_Darmor_BZH_scaffold_268p00020 Brassica napus HOM05D006450 ORTHO05D001777 5.4e-27 124.4 80 77.5
A09p30690 Brassica napus HOM05D006450 ORTHO05D001777 3.8e-25 118.2 58 96.6
arahy.Tifrunner.gnm1.ann1.HX86U3 Arachis hypogaea HOM05D006450 ORTHO05D001777 2.5e-24 115.5 105 63.8
BNapus_Darmor_BZH_scaffold_181p00010 Brassica napus HOM05D006450 ORTHO05D001777 3.3e-24 115.2 65 81.5
arahy.Tifrunner.gnm1.ann1.IBA4PL Arachis hypogaea HOM05D006450 ORTHO05D001777 4.2e-24 114.8 116 59.5
Cpa.g.sc2112.1 Carica papaya HOM05D007851 ORTHO05D007849 2.8e-23 112.1 55 96.4
Migut.A01237 Erythranthe guttata HOM05D006450 ORTHO05D001777 4.0e-22 108.2 55 92.7
RhsimUnG0208900 Rhododendron simsii HOM05D006450 ORTHO05D001777 1.2e-21 106.7 55 90.9
Sc14g0003720 Simmondsia chinensis HOM05D013320 ORTHO05D387512 2.0e-21 105.9 53 92.5
A05p22460 Brassica napus HOM05D006450 ORTHO05D001777 4.4e-21 104.8 53 90.6
A06p24770 Brassica napus HOM05D006450 ORTHO05D001777 4.4e-21 104.8 76 72.4
arahy.Tifrunner.gnm1.ann1.4EJ54G Arachis hypogaea HOM05D006450 ORTHO05D001777 3.7e-20 101.7 58 86.2
arahy.Tifrunner.gnm1.ann1.59N28G Arachis hypogaea HOM05D006450 ORTHO05D007849 3.7e-20 101.7 58 86.2
arahy.Tifrunner.gnm1.ann1.CY7VGA Arachis hypogaea HOM05D006450 ORTHO05D001777 3.7e-20 101.7 58 86.2
arahy.Tifrunner.gnm1.ann1.DW5R15 Arachis hypogaea HOM05D006450 ORTHO05D007849 3.7e-20 101.7 58 86.2
arahy.Tifrunner.gnm1.ann1.FM2NH1 Arachis hypogaea HOM05D006450 ORTHO05D001777 3.7e-20 101.7 58 86.2
arahy.Tifrunner.gnm1.ann1.N4E4FQ Arachis hypogaea HOM05D006450 ORTHO05D001777 3.7e-20 101.7 58 86.2
arahy.Tifrunner.gnm1.ann1.U7NBP2 Arachis hypogaea HOM05D006450 ORTHO05D001777 3.7e-20 101.7 58 86.2
arahy.Tifrunner.gnm1.ann1.Y3V93U Arachis hypogaea HOM05D006450 ORTHO05D001777 3.7e-20 101.7 58 86.2
arahy.Tifrunner.gnm1.ann1.JLZP6T Arachis hypogaea HOM05D006450 ORTHO05D001777 4.9e-20 101.3 57 86.0
arahy.Tifrunner.gnm1.ann1.DBUY86 Arachis hypogaea HOM05D006450 ORTHO05D001777 6.3e-20 100.9 58 86.2
arahy.Tifrunner.gnm1.ann1.PJI1IR Arachis hypogaea HOM05D006450 ORTHO05D001777 1.8e-19 99.4 58 84.5
arahy.Tifrunner.gnm1.ann1.IKKG03 Arachis hypogaea HOM05D006450 ORTHO05D001777 2.4e-19 99.0 58 84.5
Duzib093G1336 Durio zibethinus HOM05D006450 ORTHO05D001777 3.1e-19 98.6 55 85.5
LjContig00372g0003179 Lotus japonicus HOM05D006450 ORTHO05D001777 3.1e-19 98.6 108 51.9
LjContig00479g0011945 Lotus japonicus HOM05D006450 ORTHO05D001777 3.1e-19 98.6 108 51.9
unitig_124.g30877 Utricularia gibba HOM05D006450 ORTHO05D001777 3.1e-19 98.6 57 84.2
unitig_245.g35376 Utricularia gibba HOM05D006450 ORTHO05D007849 3.1e-19 98.6 57 84.2
unitig_579.g34820 Utricularia gibba HOM05D007851 ORTHO05D007849 3.1e-19 98.6 57 84.2
unitig_587.g34769 Utricularia gibba HOM05D007851 ORTHO05D007849 3.1e-19 98.6 57 84.2
unitig_644.g34716 Utricularia gibba HOM05D006450 ORTHO05D001777 3.1e-19 98.6 57 84.2
unitig_668.g29656 Utricularia gibba HOM05D006450 ORTHO05D001777 3.1e-19 98.6 57 84.2
unitig_807.g34415 Utricularia gibba HOM05D006450 ORTHO05D001777 3.1e-19 98.6 57 84.2
arahy.Tifrunner.gnm1.ann1.GBJ0Q2 Arachis hypogaea HOM05D006450 ORTHO05D001777 5.4e-19 97.8 58 84.5
arahy.Tifrunner.gnm1.ann1.Y74ICM Arachis hypogaea HOM05D006450 ORTHO05D001777 5.4e-19 97.8 58 84.5
RhsimUnG0208400 Rhododendron simsii HOM05D000099 ORTHO05D000205 5.4e-19 97.8 50 90.0
arahy.Tifrunner.gnm1.ann1.VCF5QC Arachis hypogaea HOM05D000099 ORTHO05D000205 7.0e-19 97.4 73 72.6
arahy.Tifrunner.gnm1.ann1.M1SIGC Arachis hypogaea HOM05D006450 ORTHO05D001777 1.2e-18 96.7 58 82.8
LjContig00006g0004286 Lotus japonicus HOM05D006450 ORTHO05D001777 1.6e-18 96.3 108 50.9
unitig_836.g33490 Utricularia gibba HOM05D011479 ORTHO05D007849 3.5e-18 95.1 66 75.8
unitig_96.g33467 Utricularia gibba HOM05D011479 ORTHO05D007849 3.5e-18 95.1 66 75.8
Duzib093G0876 Durio zibethinus HOM05D006450 ORTHO05D001777 1.0e-17 93.6 55 81.8
unitig_813.g34363 Utricularia gibba HOM05D006450 ORTHO05D001777 1.0e-17 93.6 51 88.2
Nn061s42067 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.7e-17 92.8 117 50.4
Nn069s42367 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.7e-17 92.8 117 50.4
Nn098s43115 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.7e-17 92.8 117 50.4
Nn119s43472 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.7e-17 92.8 117 50.4
Nn139s43902 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.7e-17 92.8 117 50.4
Nn185s44669 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.7e-17 92.8 117 50.4
Nn208s45111 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.7e-17 92.8 117 50.4
Nn227s45449 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.7e-17 92.8 117 50.4
Nn247s45810 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.7e-17 92.8 117 50.4
Nn273s46056 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.7e-17 92.8 117 50.4
Nn5g28945 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.7e-17 92.8 117 50.4
unitig_8.g4071 Utricularia gibba HOM05D006450 ORTHO05D001777 5.0e-17 91.3 66 69.7
Cpa.g.sc121.11 Carica papaya HOM05D006450 ORTHO05D001777 6.6e-17 90.9 49 85.7
Medtr0055s0140 Medicago truncatula HOM05D000099 ORTHO05D000205 1.1e-16 90.1 99 52.5
A06p23510 Brassica napus HOM05D006450 ORTHO05D101706 1.5e-16 89.7 50 82.0
Sed0026508 Sechium edule HOM05D003742 ORTHO05D001777 1.5e-16 89.7 44 93.2
Sopen00g002280 Solanum pennellii HOM05D000099 ORTHO05D000205 2.5e-16 89.0 63 69.8
Duzib093G0575 Durio zibethinus HOM05D006450 ORTHO05D001777 3.3e-16 88.6 61 72.1
arahy.Tifrunner.gnm1.ann1.FM8SZR Arachis hypogaea HOM05D006450 ORTHO05D001777 4.3e-16 88.2 58 70.7
Medtr0055s0050 Medicago truncatula HOM05D000099 ORTHO05D000205 5.6e-16 87.8 99 53.5
LjContig00547g0007783 Lotus japonicus HOM05D007851 ORTHO05D007849 9.5e-16 87.0 57 77.2
Lj5g0003833 Lotus japonicus HOM05D007851 ORTHO05D007849 1.6e-15 86.3 68 67.6
Medtr0052s0090 Medicago truncatula HOM05D006450 ORTHO05D001777 1.6e-15 86.3 108 50.0
LjContig00371g0016194 Lotus japonicus HOM05D000099 ORTHO05D000205 3.6e-15 85.1 41 95.1
unitig_102.g31719 Utricularia gibba HOM05D006450 ORTHO05D001777 2.3e-14 82.4 40 92.5
BNapus_Darmor_BZH_scaffold_268p00070 Brassica napus HOM05D006450 ORTHO05D033266 2.2e-12 75.9 65 63.1
Sopen07g009520 Solanum pennellii HOM05D000099 ORTHO05D000205 3.7e-12 75.1 54 66.7
BcaNung05352 Brassica carinata HOM05D006450 ORTHO05D001777 8.3e-12 73.9 75 60.0
Duzib147G1173 Durio zibethinus HOM05D000099 ORTHO05D000205 8.3e-12 73.9 53 64.2
BcaC03g17349 Brassica carinata HOM05D000099 ORTHO05D000205 1.6e-10 69.7 53 67.9
Duzib250G0002 Durio zibethinus HOM05D000099 ORTHO05D000205 2.7e-10 68.9 36 91.7
unitig_813.g34373 Utricularia gibba HOM05D000099 ORTHO05D002059 2.7e-10 68.9 42 78.6
A06p23820 Brassica napus HOM05D006450 ORTHO05D001777 6.0e-10 67.8 48 70.8
Nn3g16078 Nelumbo nucifera HOM05D002905 ORTHO05D031518 6.0e-10 67.8 59 59.3
A06p25830 Brassica napus HOM05D000099 ORTHO05D000205 1.0e-09 67.0 32 96.9
Mapoly0011s0192 Marchantia polymorpha HOM05D006450 ORTHO05D001777 1.0e-09 67.0 44 72.7
Medtr0152s0120 Medicago truncatula HOM05D000099 ORTHO05D000205 1.3e-09 66.6 34 85.3
Lj2g0016942 Lotus japonicus HOM05D000099 ORTHO05D000205 2.3e-09 65.9 47 70.2
LjContig00098g0020910 Lotus japonicus HOM05D000099 ORTHO05D000205 3.9e-09 65.1 37 81.1
arahy.Tifrunner.gnm1.ann1.6AY1PL Arachis hypogaea HOM05D000099 ORTHO05D000205 6.6e-09 64.3 39 79.5
Medtr0152s0090 Medicago truncatula HOM05D000099 ORTHO05D000205 6.6e-09 64.3 109 41.3
BNapus_Darmor_BZH_scaffold_107p00250 Brassica napus HOM05D006450 ORTHO05D001777 1.9e-08 62.8 60 61.7
Dinv01605 Davidia involucrata HOM05D000099 ORTHO05D000205 4.3e-08 61.6 31 90.3
Nn252s45879 Nelumbo nucifera HOM05D002905 ORTHO05D001777 5.6e-08 61.2 61 52.5
Lalb_Chr01g0023261 Lupinus albus HOM05D007653 ORTHO05D009670 9.5e-08 60.5 50 52.0
Rhsim05G0123400 Rhododendron simsii HOM05D006450 ORTHO05D018518 1.2e-07 60.1 31 87.1
SHI27865 Sapria himalayana HOM05D000099 ORTHO05D000205 2.8e-07 58.9 48 60.4
SHI35529 Sapria himalayana HOM05D000099 ORTHO05D000205 2.8e-07 58.9 33 81.8
SHI35534 Sapria himalayana HOM05D000099 ORTHO05D000205 2.8e-07 58.9 33 81.8
SHI35537 Sapria himalayana HOM05D000099 ORTHO05D000205 2.8e-07 58.9 33 81.8
SHI38617 Sapria himalayana HOM05D000099 ORTHO05D000205 2.8e-07 58.9 33 81.8
SHI38620 Sapria himalayana HOM05D000099 ORTHO05D000205 2.8e-07 58.9 33 81.8
SHI39807 Sapria himalayana HOM05D000099 ORTHO05D000205 2.8e-07 58.9 33 81.8
SHI39842 Sapria himalayana HOM05D000099 ORTHO05D000205 2.8e-07 58.9 33 81.8
SHI41311 Sapria himalayana HOM05D000099 ORTHO05D000205 2.8e-07 58.9 33 81.8
BNapus_Darmor_BZH_scaffold_107p00390 Brassica napus HOM05D006450 ORTHO05D001777 8.0e-07 57.4 36 77.8
Lj2g0005038 Lotus japonicus HOM05D000099 ORTHO05D000205 8.0e-07 57.4 29 86.2
CAN.G1991.2 Capsicum annuum HOM05D000099 ORTHO05D000205 1.1e-06 57.0 33 78.8
SHI17753 Sapria himalayana HOM05D000099 ORTHO05D000205 1.1e-06 57.0 76 39.5
DCAR_032322 Daucus carota HOM05D006450 ORTHO05D001777 8.9e-06 53.9 41 68.3


User provided reference genes

Program Settings