Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 1.0e-176 623.2 303 100.0
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 1.9e-175 619.0 303 99.3
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 2.3e-168 595.5 303 95.4
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 1.4e-165 586.3 303 94.4
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 1.4e-165 586.3 303 94.4
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 3.1e-149 531.9 298 86.6
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 5.8e-148 527.7 312 84.0
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 1.9e-143 512.7 312 82.7
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 8.2e-142 507.3 301 83.7
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 2.1e-137 492.7 292 80.8
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 1.5e-132 476.5 289 79.6
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 2.5e-130 469.2 384 65.4
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 3.2e-130 468.8 312 77.2
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 2.5e-122 442.6 299 72.9
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 5.7e-111 404.8 286 67.1
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 2.4e-109 399.4 300 63.7
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 9.1e-109 397.5 291 65.6
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 3.5e-108 395.6 285 66.0
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 7.7e-108 394.4 293 64.2
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 8.5e-107 391.0 288 66.7
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 8.5e-107 391.0 289 65.1
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 3.2e-106 389.0 287 65.2
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 7.2e-106 387.9 286 63.6
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 9.4e-106 387.5 286 63.6
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 9.4e-106 387.5 286 64.3
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 1.2e-105 387.1 288 64.2
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 2.1e-105 386.3 287 63.8
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 3.6e-105 385.6 286 64.0
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 6.1e-105 384.8 287 62.7
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 6.1e-105 384.8 286 62.9
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 6.1e-105 384.8 291 64.3
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 1.4e-104 383.6 286 63.3
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 1.4e-104 383.6 290 65.5
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 1.4e-104 383.6 290 62.8
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.8e-104 383.3 286 63.6
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 2.3e-104 382.9 294 64.3
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 3.0e-104 382.5 290 65.2
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 6.8e-104 381.3 285 63.5
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 6.8e-104 381.3 283 64.0
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 6.8e-104 381.3 294 63.3
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 6.8e-104 381.3 296 62.2
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 1.2e-103 380.6 282 64.2
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 1.5e-103 380.2 284 64.1
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 2.0e-103 379.8 284 64.1
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 2.6e-103 379.4 297 62.6
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 3.4e-103 379.0 286 63.3
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 4.4e-103 378.6 296 61.5
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 7.5e-103 377.9 291 62.9
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 1.3e-102 377.1 287 62.4
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 1.7e-102 376.7 288 63.9
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 3.7e-102 375.6 294 60.9
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 6.3e-102 374.8 287 63.1
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 8.3e-102 374.4 287 64.8
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 8.3e-102 374.4 286 63.6
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 8.3e-102 374.4 286 63.6
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 1.1e-101 374.0 280 63.6
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 1.4e-101 373.6 286 64.3
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.4e-101 372.9 282 63.8
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 3.1e-101 372.5 290 62.1
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 4.1e-101 372.1 286 62.6
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 1.2e-100 370.5 290 63.8
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 2.0e-100 369.8 289 60.9
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.3e-99 366.3 280 64.3
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 2.3e-99 366.3 282 63.5
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 2.3e-99 366.3 286 62.9
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 2.9e-99 365.9 284 60.9
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 3.8e-99 365.5 310 59.0
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 6.5e-99 364.8 286 62.9
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 2.5e-98 362.8 289 61.9
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 3.2e-98 362.5 308 59.1
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 4.2e-98 362.1 285 60.4
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 7.2e-98 361.3 317 56.8
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 1.2e-97 360.5 281 63.0
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 2.8e-97 359.4 286 61.5
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 6.1e-97 358.2 292 61.0
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 6.1e-97 358.2 284 59.5
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 1.0e-96 357.5 290 59.0
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 4.0e-96 355.5 346 53.2
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 1.2e-95 354.0 289 60.2
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 2.0e-95 353.2 289 61.6
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 8.3e-94 347.8 291 60.1
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 1.1e-93 347.4 285 58.9
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 9.2e-93 344.4 293 57.7
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 1.6e-89 333.6 260 61.5
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.3e-88 329.7 284 59.5
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 2.0e-87 326.6 285 57.2
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.7e-83 313.5 183 82.5
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 3.0e-83 312.8 286 56.6
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 5.0e-83 312.0 281 55.2
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 2.5e-82 309.7 290 54.5
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 3.3e-82 309.3 282 53.5
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 4.7e-81 305.4 278 56.1
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.4e-80 303.9 276 57.2
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.3e-80 303.1 280 54.6
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 3.1e-80 302.8 281 55.2
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.5e-79 300.4 285 54.7
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 5.8e-79 298.5 228 62.7
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 1.9e-77 293.5 218 65.1
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 1.0e-75 287.7 287 50.9
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 2.6e-71 273.1 205 63.9
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 2.6e-71 273.1 261 52.9
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 1.2e-68 264.2 441 38.8
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 5.6e-66 255.4 179 65.9
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 4.0e-64 249.2 341 41.1
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 6.8e-64 248.4 285 47.0
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 9.2e-61 238.0 283 45.9
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.1e-53 214.5 173 59.5
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 3.5e-52 209.5 197 54.3
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 8.1e-49 198.4 159 60.4
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.3e-30 137.9 143 51.7
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.4e-29 134.4 108 62.0
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 4.2e-29 132.9 261 31.8
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 3.5e-28 129.8 108 58.3
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 1.5e-26 124.4 204 37.3
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 3.7e-25 119.8 249 32.1
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 2.1e-20 104.0 71 71.8
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 5.9e-15 85.9 67 55.2
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 1.6e-12 77.8 54 77.8
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.3e-11 73.9 53 69.8
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 6.7e-11 72.4 59 62.7


User provided reference genes

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