Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p20890 Brassica napus HOM05D001899 ORTHO05D001858 1.6e-58 229.2 115 100.0
A02p21350 Brassica napus HOM05D001899 ORTHO05D001858 6.0e-29 131.0 65 96.9
C08p03920 Brassica napus HOM05D001899 ORTHO05D001858 6.0e-29 131.0 65 96.9
C08p27130 Brassica napus HOM05D001899 ORTHO05D001858 6.0e-29 131.0 65 96.9
C08p23100 Brassica napus HOM05D001899 ORTHO05D001858 1.8e-28 129.4 65 95.4
C02p46420 Brassica napus HOM05D001899 ORTHO05D001858 2.3e-28 129.0 64 96.9
BcaC09g51287 Brassica carinata HOM05D001899 ORTHO05D001858 5.1e-28 127.9 65 95.4
BcaNung05132 Brassica carinata HOM05D001899 ORTHO05D001858 5.1e-28 127.9 65 95.4
C01p14770 Brassica napus HOM05D001899 ORTHO05D001858 5.1e-28 127.9 65 95.4
C06p15720 Brassica napus HOM05D001899 ORTHO05D001858 5.1e-28 127.9 65 95.4
BraA02t07954Z Brassica rapa HOM05D001899 ORTHO05D001858 6.7e-28 127.5 64 95.3
BcaC03g16765 Brassica carinata HOM05D001899 ORTHO05D001858 1.9e-27 125.9 64 95.3
A02p29250 Brassica napus HOM05D001899 ORTHO05D001858 2.5e-27 125.6 64 93.8
BcaC03g16770 Brassica carinata HOM05D001899 ORTHO05D001858 5.7e-27 124.4 64 92.2
BcaB07g30441 Brassica carinata HOM05D001899 ORTHO05D001858 1.4e-25 119.8 64 89.1
BraA02t08031Z Brassica rapa HOM05D001899 ORTHO05D001858 5.9e-24 114.4 56 98.2
BolC2t10696H Brassica oleracea HOM05D001899 ORTHO05D001858 3.8e-23 111.7 57 93.0
BraA03t11347Z Brassica rapa HOM05D001899 ORTHO05D014741 4.6e-21 104.8 52 96.2
CARHR176520 Cardamine hirsuta HOM05D001899 ORTHO05D001858 1.8e-20 102.8 64 78.1
CARHR176530 Cardamine hirsuta HOM05D001899 ORTHO05D001858 3.9e-20 101.7 64 76.6
BcaC06g31548 Brassica carinata HOM05D001899 ORTHO05D001858 6.7e-20 100.9 64 70.3
A06p46580 Brassica napus HOM05D001899 ORTHO05D001858 1.5e-19 99.8 64 79.7
AL8G13220 Arabidopsis lyrata HOM05D001899 ORTHO05D001858 1.9e-19 99.4 64 73.4
BraA06t27532Z Brassica rapa HOM05D001899 ORTHO05D001858 2.5e-19 99.0 64 78.1
Carub.0008s0252 Capsella rubella HOM05D001899 ORTHO05D001858 4.3e-19 98.2 66 77.3
BolC2t10694H Brassica oleracea HOM05D001899 ORTHO05D001858 5.7e-19 97.8 49 95.9
AT5G45500 Arabidopsis thaliana HOM05D001899 ORTHO05D001858 7.4e-19 97.4 64 70.3
BcaC06g34430 Brassica carinata HOM05D001899 ORTHO05D001858 1.1e-17 93.6 64 73.4
C07p28570 Brassica napus HOM05D001899 ORTHO05D001858 1.1e-17 93.6 64 73.4
BolC7t43395H Brassica oleracea HOM05D001899 ORTHO05D001858 1.1e-17 93.6 64 73.4
Thhalv10000788m.g Eutrema salsugineum HOM05D001899 ORTHO05D001858 1.5e-16 89.7 63 73.0
THA.LOC104798669 Tarenaya hassleriana HOM05D001899 ORTHO05D001858 2.0e-16 89.4 64 65.6
THA.LOC104807149 Tarenaya hassleriana HOM05D001899 ORTHO05D001858 2.0e-16 89.4 64 65.6
BcaC06g31547 Brassica carinata HOM05D001899 ORTHO05D001858 1.7e-15 86.3 64 68.8
BcaNung04015 Brassica carinata HOM05D001899 ORTHO05D001858 6.7e-12 74.3 64 56.2
C02p46440 Brassica napus HOM05D001899 ORTHO05D001858 2.0e-11 72.8 35 97.1
AL7G35010 Arabidopsis lyrata HOM05D001899 ORTHO05D001858 9.7e-11 70.5 64 51.6
Thhalv10024687m.g Eutrema salsugineum HOM05D001899 ORTHO05D001858 3.7e-10 68.6 64 53.1
BcaC03g16767 Brassica carinata HOM05D001899 ORTHO05D001858 6.9e-09 64.3 31 93.5
Carub.0008s0250 Capsella rubella HOM05D001899 ORTHO05D001858 2.0e-08 62.8 64 50.0
AL8G13350 Arabidopsis lyrata HOM05D001899 ORTHO05D001858 3.4e-08 62.0 64 51.6
Carub.0008s0261 Capsella rubella HOM05D001899 ORTHO05D001858 2.2e-07 59.3 64 48.4
AL8G13180 Arabidopsis lyrata HOM05D001899 ORTHO05D001858 3.2e-06 55.5 64 46.9
BcaC06g34428 Brassica carinata HOM05D001899 ORTHO05D001858 4.2e-06 55.1 64 45.3
C07p28610 Brassica napus HOM05D001899 ORTHO05D001858 4.2e-06 55.1 64 45.3
BolC7t43399H Brassica oleracea HOM05D001899 ORTHO05D001858 4.2e-06 55.1 64 45.3
Atru.chr2.1017 Acer truncatum HOM05D001899 ORTHO05D001858 5.5e-06 54.7 64 48.4
A06p46560 Brassica napus HOM05D001899 ORTHO05D001858 5.5e-06 54.7 64 45.3
Thhalv10000749m.g Eutrema salsugineum HOM05D001899 ORTHO05D001858 5.5e-06 54.7 64 45.3
Sp2g10420 Schrenkiella parvula HOM05D001899 ORTHO05D001858 5.5e-06 54.7 64 45.3
BraA06t27530Z Brassica rapa HOM05D001899 ORTHO05D001858 7.2e-06 54.3 64 45.3
Atru.chr2.1041 Acer truncatum HOM05D001899 ORTHO05D001858 9.4e-06 53.9 84 39.3
Aa31LG9G7500 Aethionema arabicum HOM05D001899 ORTHO05D001858 9.4e-06 53.9 64 43.8


User provided reference genes

Program Settings