Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 2.8e-123 445.3 225 100.0
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 1.8e-122 442.6 225 99.1
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 1.8e-122 442.6 225 99.1
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 4.5e-121 438.0 225 98.2
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 4.5e-121 438.0 225 98.2
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 4.5e-121 438.0 225 98.2
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 3.4e-116 421.8 225 92.9
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 2.9e-112 408.7 225 88.4
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 1.1e-111 406.8 231 87.9
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 1.5e-111 406.4 231 89.2
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 2.5e-111 405.6 232 87.9
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 2.7e-110 402.1 236 86.0
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 3.6e-110 401.7 234 86.3
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 1.7e-107 392.9 229 84.7
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 2.6e-100 369.0 228 79.8
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 1.5e-84 316.6 228 68.4
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 4.9e-83 311.6 228 66.7
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 7.1e-82 307.8 238 61.8
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 3.5e-81 305.4 236 64.4
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 6.0e-81 304.7 238 62.2
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 1.7e-80 303.1 236 64.0
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 2.3e-80 302.8 239 61.5
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 1.9e-79 299.7 238 63.4
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 4.3e-79 298.5 237 59.9
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 7.3e-79 297.7 228 61.0
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 2.1e-78 296.2 229 63.8
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 2.1e-78 296.2 228 61.4
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 4.7e-78 295.0 238 60.1
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 4.7e-78 295.0 234 60.3
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 8.1e-78 294.3 230 60.4
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 3.1e-77 292.4 238 59.7
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 5.2e-77 291.6 228 60.1
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 1.5e-76 290.0 232 61.6
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 4.4e-76 288.5 228 59.6
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 5.8e-76 288.1 238 61.3
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.7e-75 285.4 224 59.8
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 8.4e-75 284.3 230 58.7
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 3.2e-74 282.3 233 61.8
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 4.1e-74 282.0 238 59.7
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 4.6e-73 278.5 238 57.1
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 7.8e-73 277.7 239 59.8
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 1.0e-72 277.3 237 57.4
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.3e-72 276.9 223 62.3
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 3.0e-72 275.8 229 56.3
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 3.9e-72 275.4 238 56.7
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 5.1e-72 275.0 235 60.4
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 6.6e-72 274.6 237 60.3
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 1.1e-71 273.9 231 58.0
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 2.5e-71 272.7 221 62.0
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 3.3e-71 272.3 238 55.5
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 1.6e-70 270.0 235 56.2
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 4.7e-70 268.5 224 58.5
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 8.1e-70 267.7 234 59.4
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 8.1e-70 267.7 228 56.1
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 1.4e-69 266.9 244 55.3
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 2.4e-69 266.2 235 58.3
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 4.0e-69 265.4 240 52.9
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 6.8e-69 264.6 229 55.9
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 2.6e-68 262.7 239 58.2
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 3.4e-68 262.3 235 54.0
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 4.4e-68 261.9 234 55.1
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 5.8e-68 261.5 233 56.7
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 5.8e-68 261.5 233 58.4
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 9.9e-68 260.8 196 63.8
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 1.3e-67 260.4 229 57.2
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 1.7e-67 260.0 235 53.6
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 2.2e-67 259.6 239 56.5
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 1.1e-66 257.3 229 53.7
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 3.2e-66 255.8 238 52.1
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 3.0e-64 249.2 180 67.2
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 3.9e-64 248.8 180 67.2
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 5.1e-64 248.4 195 61.0
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 2.1e-62 243.0 233 54.1
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 1.1e-61 240.7 231 50.6
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 2.4e-61 239.6 238 51.3
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 3.1e-61 239.2 240 52.5
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 3.1e-61 239.2 205 59.5
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 2.0e-60 236.5 194 60.8
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 1.3e-59 233.8 180 65.6
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 1.7e-59 233.4 229 51.5
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 2.9e-59 232.6 225 51.1
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 1.4e-58 230.3 192 57.3
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 5.4e-58 228.4 236 50.4
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 1.8e-53 213.4 179 59.8
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 9.0e-53 211.1 214 53.3
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 2.0e-52 209.9 216 50.5
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 3.4e-52 209.1 176 60.2
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 4.6e-49 198.7 201 51.2
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 8.7e-48 194.5 142 66.2
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.5e-47 193.7 177 57.6
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 5.3e-45 185.3 115 80.9
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 1.0e-43 181.0 333 32.7
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 6.7e-40 168.3 129 64.3
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 6.7e-40 168.3 170 51.8
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 1.5e-31 140.6 272 32.4
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 7.4e-31 138.3 239 33.1
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 3.1e-29 132.9 225 38.7
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 9.0e-29 131.3 227 37.0
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.5e-28 130.6 174 43.7
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 9.4e-26 121.3 89 62.9
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 7.9e-25 118.2 208 38.0
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 7.4e-23 111.7 267 28.1
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 1.0e-16 91.3 96 53.1
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 6.7e-16 88.6 79 53.2
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 1.5e-15 87.4 120 39.2
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 1.6e-09 67.4 124 29.8
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 8.0e-09 65.1 65 49.2
MCO13G538 Micromonas commoda HOM05D006594 ORTHO05D008383 8.2e-06 55.1 234 23.5


User provided reference genes

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