Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 3.1e-174 615.1 335 100.0
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 3.1e-174 615.1 335 100.0
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 6.9e-158 560.8 339 93.5
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 6.9e-158 560.8 339 93.5
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 1.9e-155 552.7 339 92.6
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 1.3e-151 540.0 336 89.3
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 3.7e-135 485.3 341 82.7
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 3.6e-114 415.6 338 72.8
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 2.8e-111 406.0 338 71.9
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 1.1e-107 394.0 335 70.4
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 1.1e-107 394.0 339 71.4
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 7.5e-104 381.3 280 79.3
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 3.4e-96 355.9 339 67.8
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 7.5e-88 328.2 319 66.1
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 1.2e-74 284.3 351 55.3
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 2.2e-71 273.5 368 52.2
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 1.1e-49 201.4 381 43.3
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 5.3e-49 199.1 373 45.6
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 3.4e-48 196.4 370 43.2
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 5.8e-48 195.7 370 45.4
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 4.9e-47 192.6 373 42.4
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 2.4e-46 190.3 361 43.8
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 3.2e-46 189.9 367 44.7
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 6.0e-45 185.7 372 42.7
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 1.3e-44 184.5 375 43.2
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 1.3e-44 184.5 380 40.5
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.8e-44 184.1 370 42.7
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 2.3e-44 183.7 369 43.1
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 5.1e-44 182.6 370 43.8
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 6.7e-44 182.2 371 43.9
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 6.7e-44 182.2 381 42.3
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 1.9e-43 180.6 377 43.0
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.5e-43 180.3 370 42.2
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 3.3e-43 179.9 377 41.4
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 3.3e-43 179.9 369 42.8
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 3.3e-43 179.9 365 42.5
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 5.6e-43 179.1 387 41.6
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 7.4e-43 178.7 377 41.1
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.3e-42 177.9 373 41.8
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 4.8e-42 176.0 363 41.9
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 1.1e-41 174.9 361 44.6
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 1.8e-41 174.1 372 41.7
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 4.0e-41 172.9 367 42.2
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 6.9e-41 172.2 356 41.9
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 1.3e-39 167.9 374 41.2
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 1.7e-39 167.5 359 41.8
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.2e-39 167.2 375 40.5
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 8.4e-39 165.2 366 42.6
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 8.4e-39 165.2 376 41.2
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 1.1e-38 164.9 434 38.5
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 1.1e-38 164.9 379 41.7
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 1.1e-38 164.9 355 40.3
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 1.9e-38 164.1 360 40.8
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 3.2e-38 163.3 358 39.1
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 9.3e-38 161.8 370 40.5
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 1.2e-37 161.4 361 42.1
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 1.6e-37 161.0 352 43.2
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 7.9e-37 158.7 357 39.5
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 1.0e-36 158.3 365 41.1
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 1.3e-36 157.9 367 40.3
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 2.3e-36 157.1 377 40.1
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 6.7e-36 155.6 376 38.8
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 6.7e-36 155.6 376 40.2
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 6.7e-36 155.6 384 38.5
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 8.7e-36 155.2 367 38.7
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 1.9e-35 154.1 367 39.0
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 1.9e-35 154.1 317 42.9
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 2.5e-35 153.7 373 37.3
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 9.6e-35 151.8 356 41.0
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 1.3e-34 151.4 466 34.3
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 1.3e-34 151.4 358 39.9
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 1.6e-34 151.0 365 39.2
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 2.8e-34 150.2 396 38.1
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.6e-32 143.7 405 37.3
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 2.6e-32 143.7 302 40.1
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 1.3e-31 141.4 354 38.4
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 8.4e-31 138.7 410 32.7
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 1.4e-30 137.9 408 32.6
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 9.3e-30 135.2 311 38.9
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 1.3e-28 131.3 355 34.9
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 1.3e-28 131.3 355 34.9
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 3.9e-28 129.8 302 40.1
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 6.7e-28 129.0 349 34.7
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 1.1e-27 128.3 400 34.8
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 1.1e-27 128.3 353 38.0
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 9.7e-27 125.2 422 34.4
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 2.2e-26 124.0 383 33.4
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 1.1e-25 121.7 293 36.5
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 2.6e-24 117.1 297 39.1
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 5.5e-22 109.4 364 33.2
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 3.3e-19 100.1 360 31.1
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 5.7e-19 99.4 339 33.6
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 6.3e-18 95.9 348 31.6
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 4.1e-17 93.2 397 31.0
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 1.5e-16 91.3 352 33.2
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 3.4e-16 90.1 352 33.2
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 5.9e-16 89.4 353 32.6
BcaNung06177 Brassica carinata HOM05D006327 ORTHO05D007952 7.7e-16 89.0 65 76.9
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 2.2e-15 87.4 307 30.0
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 2.9e-15 87.0 352 32.1
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 1.4e-14 84.7 156 47.4
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 1.0e-12 78.6 259 29.7
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.6e-11 73.9 48 68.8
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.6e-11 73.9 48 68.8
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 3.3e-11 73.6 52 59.6
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.3e-11 73.6 48 68.8
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.3e-11 73.6 48 68.8
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 7.4e-11 72.4 48 66.7
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 9.7e-11 72.0 47 68.1
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 2.8e-10 70.5 335 27.2
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 3.7e-10 70.1 240 34.2
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 4.8e-10 69.7 48 64.6
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.3e-10 69.3 48 64.6
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.3e-10 69.3 48 64.6
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 2.4e-09 67.4 214 34.6
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 7.0e-09 65.9 354 28.5
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.2e-08 65.1 106 38.7
SMO361G0693 Selaginella moellendorffii HOM05D006327 ORTHO05D007952 1.4e-06 58.2 206 25.7
Migut.B01064 Erythranthe guttata HOM05D006327 ORTHO05D007952 2.5e-06 57.4 58 53.4
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 3.2e-06 57.0 158 33.5


User provided reference genes

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