Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p19180 Brassica napus HOM05D011956 ORTHO05D014041 1.7e-262 908.7 431 100.0
BraA06t25001Z Brassica rapa HOM05D011956 ORTHO05D014041 6.2e-260 900.2 432 99.3
BcaC07g39335 Brassica carinata HOM05D011956 ORTHO05D014041 2.8e-220 768.5 431 87.9
C08p23510 Brassica napus HOM05D011956 ORTHO05D014041 3.3e-213 745.0 431 86.1
CARHR157320 Cardamine hirsuta HOM05D011956 ORTHO05D014041 5.0e-145 518.5 433 64.4
AL5G28140 Arabidopsis lyrata HOM05D011956 ORTHO05D014041 1.9e-131 473.4 485 53.6
C02p30570 Brassica napus HOM05D011956 ORTHO05D014041 1.7e-113 413.7 438 52.1
BolC2t09107H Brassica oleracea HOM05D011956 ORTHO05D014041 1.7e-113 413.7 438 52.1
Carub.0005s1487 Capsella rubella HOM05D011956 ORTHO05D014041 9.3e-107 391.3 445 50.3
Sp5g13480 Schrenkiella parvula HOM05D011956 ORTHO05D014041 1.7e-79 300.8 209 71.8
Thhalv10015397m.g Eutrema salsugineum HOM05D011956 ORTHO05D014041 4.8e-79 299.3 297 54.2
CARHR157510 Cardamine hirsuta HOM05D011956 ORTHO05D014041 6.5e-76 288.9 281 50.5
AT3G15910 Arabidopsis thaliana HOM05D011956 ORTHO05D014041 7.2e-75 285.4 299 51.2
Carub.0003s1565 Capsella rubella HOM05D011956 ORTHO05D014041 1.2e-74 284.6 304 51.3
BolC8t49979H Brassica oleracea HOM05D011956 ORTHO05D014041 9.7e-64 248.4 133 92.5
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 1.2e-18 98.6 290 28.3
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 3.1e-17 94.0 418 23.9
QL05p012608 Quercus lobata HOM05D001729 ORTHO05D001155 2.6e-16 90.9 421 25.7
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 4.1e-14 83.6 391 25.3
QL05p012589 Quercus lobata HOM05D001729 ORTHO05D001155 2.1e-13 81.3 445 22.0
Sc19g0000590 Simmondsia chinensis HOM05D001729 ORTHO05D001155 2.1e-13 81.3 400 22.8
Lj2A946T25 Lonicera japonica HOM05D001729 ORTHO05D001155 1.3e-12 78.6 429 25.4
QL05p012667 Quercus lobata HOM05D001729 ORTHO05D001155 3.3e-11 73.9 401 23.9
QL05p009518 Quercus lobata HOM05D001729 ORTHO05D001155 8.1e-10 69.3 297 25.3
CAN.G231.32 Capsicum annuum HOM05D000664 ORTHO05D000491 3.1e-09 67.4 225 26.2
FvH4_6g45291 Fragaria vesca HOM05D001729 ORTHO05D001155 3.1e-09 67.4 204 29.9
FAN14G0421 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.1e-09 67.4 204 29.9
TAR374G0716 Trochodendron aralioides HOM05D003814 ORTHO05D004399 6.8e-09 66.2 285 21.4
QL05p052800 Quercus lobata HOM05D001729 ORTHO05D001155 8.9e-09 65.9 335 25.7
Sabra09G0102700 Salix brachista HOM05D001729 ORTHO05D001155 1.2e-08 65.5 376 25.3
RcHm_v2.0_Chr2g0163051 Rosa chinensis HOM05D001729 ORTHO05D001155 1.5e-08 65.1 243 28.0
TAR626G0622 Trochodendron aralioides HOM05D003814 ORTHO05D004399 5.8e-08 63.2 284 21.5
HanXRQChr15g0474331 Helianthus annuus HOM05D008898 ORTHO05D001155 7.6e-08 62.8 426 23.9
AUR62035201 Chenopodium quinoa HOM05D021952 ORTHO05D021205 9.9e-08 62.4 230 27.4
AUR62037325 Chenopodium quinoa HOM05D001808 ORTHO05D021205 9.9e-08 62.4 230 27.4
AUR62043907 Chenopodium quinoa HOM05D021952 ORTHO05D021205 9.9e-08 62.4 230 27.4
Duzib147G0011 Durio zibethinus HOM05D001729 ORTHO05D001155 1.3e-07 62.0 310 24.2
Oeu016027.1 Olea europaea HOM05D007779 ORTHO05D009863 2.2e-07 61.2 390 24.4
SGA_v2.0_scaffold232G43501 Striga asiatica HOM05D001729 ORTHO05D001155 2.2e-07 61.2 298 25.2
QL05p008212 Quercus lobata HOM05D001729 ORTHO05D001155 8.4e-07 59.3 336 25.6
HanXRQChr15g0474381 Helianthus annuus HOM05D008898 ORTHO05D001155 2.4e-06 57.8 302 23.5
MBI01_g31985_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 3.2e-06 57.4 250 26.8
QL02p054283 Quercus lobata HOM05D001729 ORTHO05D001155 4.2e-06 57.0 324 26.9
Atru.chr9.1050 Acer truncatum HOM05D006807 ORTHO05D008528 5.4e-06 56.6 318 24.2
Oeu017867.1 Olea europaea HOM05D000007 ORTHO05D000521 9.3e-06 55.8 240 25.0
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 9.3e-06 55.8 420 26.2
Zm00001eb387810 Zea mays HOM05D000007 ORTHO05D013340 9.3e-06 55.8 341 25.2


User provided reference genes

Program Settings