Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 4.4e-158 561.2 281 100.0
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 4.4e-158 561.2 281 100.0
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 8.9e-151 537.0 282 96.8
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 1.2e-150 536.6 281 96.8
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 3.4e-150 535.0 282 96.5
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 3.9e-146 521.5 285 92.6
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 5.8e-142 507.7 283 89.8
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 2.2e-141 505.8 285 90.2
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 2.4e-140 502.3 274 90.5
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 7.1e-140 500.7 275 90.2
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 2.8e-136 488.8 275 89.1
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.8e-135 486.1 285 86.0
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 4.9e-117 424.9 279 76.7
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 8.2e-112 407.5 278 71.9
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 3.1e-111 405.6 282 71.6
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 3.4e-110 402.1 271 73.4
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 1.7e-109 399.8 285 70.9
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 8.5e-109 397.5 271 72.0
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 1.1e-108 397.1 268 72.0
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 1.4e-108 396.7 275 73.1
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 5.5e-108 394.8 277 68.6
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 4.6e-107 391.7 281 71.5
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 2.3e-106 389.4 276 71.0
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.3e-106 389.4 276 71.0
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 6.7e-106 387.9 282 69.5
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 6.7e-106 387.9 282 69.5
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 8.7e-106 387.5 282 69.5
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 1.1e-105 387.1 281 70.1
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 1.1e-105 387.1 275 69.8
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 4.3e-105 385.2 295 65.4
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 5.7e-105 384.8 271 70.1
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 5.7e-105 384.8 273 70.0
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 7.4e-105 384.4 280 68.2
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 1.3e-104 383.6 268 69.8
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 2.2e-104 382.9 257 71.6
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.8e-104 382.5 276 70.3
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 2.8e-104 382.5 258 74.4
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 4.8e-104 381.7 279 69.5
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 4.1e-103 378.6 268 70.5
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 4.1e-103 378.6 278 66.2
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 5.9e-102 374.8 274 67.5
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 7.7e-102 374.4 271 70.8
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.3e-101 373.6 262 68.7
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 2.2e-101 372.9 254 72.0
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 5.0e-101 371.7 274 66.8
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 6.5e-101 371.3 262 68.3
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 1.4e-100 370.2 259 71.0
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 2.5e-100 369.4 269 68.8
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 5.5e-100 368.2 262 68.3
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 1.6e-99 366.7 274 68.6
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 2.7e-99 365.9 268 67.2
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 7.9e-99 364.4 341 58.1
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 7.9e-99 364.4 268 68.7
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 7.9e-99 364.4 264 69.3
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 1.0e-98 364.0 282 66.3
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 1.4e-98 363.6 272 65.4
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.4e-98 363.6 268 69.4
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 1.8e-98 363.2 280 65.0
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 5.1e-98 361.7 280 64.6
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 1.1e-97 360.5 273 66.7
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 1.5e-97 360.1 262 67.9
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 2.0e-97 359.8 251 69.3
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 3.3e-97 359.0 273 65.6
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 7.4e-97 357.8 265 67.9
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 7.4e-97 357.8 261 70.5
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 1.3e-96 357.1 268 65.3
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.3e-96 357.1 271 68.6
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 1.7e-96 356.7 273 67.0
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 1.7e-96 356.7 260 68.1
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 6.3e-96 354.8 257 71.2
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 2.4e-95 352.8 274 65.3
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 4.1e-95 352.1 260 68.1
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 1.2e-94 350.5 274 65.3
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 3.8e-93 345.5 257 68.5
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 8.5e-93 344.4 261 67.4
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 4.2e-92 342.0 263 66.5
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 9.4e-92 340.9 267 62.2
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 2.1e-91 339.7 277 63.5
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.5e-89 333.6 262 64.1
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 2.0e-89 333.2 264 66.3
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 4.8e-88 328.6 273 64.1
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 4.8e-88 328.6 273 64.1
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 9.1e-87 324.3 273 63.7
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 5.9e-86 321.6 273 63.0
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 5.0e-85 318.5 277 62.5
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 9.4e-84 314.3 275 64.0
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 4.7e-83 312.0 275 63.6
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 6.7e-82 308.1 272 58.1
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 6.1e-75 285.0 268 56.3
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 5.2e-74 282.0 178 73.6
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.2e-70 270.8 190 67.4
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.6e-70 270.4 135 94.8
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 3.5e-70 269.2 178 72.5
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 9.5e-68 261.2 172 72.1
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 9.8e-65 251.1 176 71.6
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 1.0e-61 241.1 174 71.3
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 1.1e-60 237.7 282 46.1
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.2e-59 234.2 168 70.2
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 1.3e-56 224.2 176 65.9
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 5.0e-53 212.2 272 46.3
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 3.3e-52 209.5 279 46.2
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 1.2e-51 207.6 272 45.2
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 4.7e-51 205.7 150 70.0
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.3e-48 197.6 263 46.0
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 7.8e-46 188.3 221 49.8
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 3.2e-39 166.4 275 38.2
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.8e-34 150.6 277 37.2
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.2e-31 139.8 78 84.6
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.7e-29 134.0 128 57.8
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 3.4e-25 119.8 157 43.9
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 5.8e-25 119.0 90 61.1
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.3e-24 117.9 280 31.8
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.3e-21 107.8 173 42.8
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.7e-21 107.5 65 72.3
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 1.6e-19 100.9 77 64.9
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 2.2e-16 90.5 80 58.8
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.1e-12 78.2 70 60.0
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 3.7e-11 73.2 130 38.5
Carub.0005s2346 Capsella rubella HOM05D006622 ORTHO05D007939 5.8e-09 65.9 39 82.1
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 1.7e-08 64.3 71 52.1


User provided reference genes

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