Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 6.0e-144 514.2 270 100.0
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 2.0e-70 270.0 152 89.5
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 4.1e-68 262.3 152 86.8
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 7.7e-67 258.1 140 92.1
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 3.8e-66 255.8 153 85.6
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 5.5e-65 251.9 151 85.4
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 3.6e-64 249.2 159 83.0
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 3.0e-63 246.1 147 84.4
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 4.4e-62 242.3 148 86.5
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 5.7e-62 241.9 152 80.9
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 9.7e-62 241.1 147 84.4
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 8.2e-61 238.0 152 78.9
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 4.1e-60 235.7 191 67.5
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 2.6e-59 233.0 152 78.3
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 1.7e-58 230.3 152 77.0
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 2.0e-51 206.8 132 81.8
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 2.0e-51 206.8 132 81.8
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 1.7e-50 203.8 152 67.8
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 6.5e-50 201.8 144 71.5
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 1.8e-44 183.7 144 67.4
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 2.1e-40 170.2 152 59.2
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 1.0e-39 167.9 159 56.0
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 1.5e-38 164.1 143 58.0
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 1.5e-38 164.1 143 58.0
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 2.6e-38 163.3 152 55.3
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 4.4e-38 162.5 185 50.3
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 7.5e-38 161.8 183 53.0
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 1.7e-37 160.6 152 55.3
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 6.4e-37 158.7 197 50.8
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 1.8e-36 157.1 152 56.6
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 5.4e-36 155.6 197 49.2
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 2.0e-35 153.7 144 57.6
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 4.6e-35 152.5 147 53.7
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 1.0e-34 151.4 137 61.3
Oeu033885.1 Olea europaea HOM05D005768 ORTHO05D007100 1.7e-34 150.6 140 56.4
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 2.3e-34 150.2 184 51.6
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 8.6e-34 148.3 142 56.3
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 1.1e-33 147.9 120 60.8
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 1.5e-33 147.5 147 54.4
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 1.9e-33 147.1 136 61.0
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 1.9e-33 147.1 156 53.8
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 2.5e-33 146.7 136 61.0
Lj7A696G17 Lonicera japonica HOM05D005768 ORTHO05D007100 3.3e-33 146.4 150 52.7
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 3.3e-33 146.4 121 62.8
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 4.3e-33 146.0 136 60.3
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 5.6e-33 145.6 165 53.9
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 7.3e-33 145.2 121 61.2
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 9.5e-33 144.8 202 44.1
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 1.6e-32 144.1 133 61.7
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 1.6e-32 144.1 119 63.0
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 1.6e-32 144.1 195 48.2
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 2.8e-32 143.3 115 63.5
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 2.8e-32 143.3 164 50.0
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 2.8e-32 143.3 195 48.2
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 3.6e-32 142.9 119 61.3
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 8.0e-32 141.7 119 60.5
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 8.0e-32 141.7 165 52.1
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 1.4e-31 141.0 119 59.7
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 1.8e-31 140.6 129 55.8
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 1.8e-31 140.6 199 45.2
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 2.3e-31 140.2 165 55.2
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 3.1e-31 139.8 152 52.6
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 4.0e-31 139.4 142 55.6
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 5.2e-31 139.0 137 53.3
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 5.2e-31 139.0 143 55.2
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 6.8e-31 138.7 119 60.5
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 6.8e-31 138.7 123 60.2
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 8.9e-31 138.3 175 46.9
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 8.9e-31 138.3 179 49.7
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 8.9e-31 138.3 129 56.6
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 8.9e-31 138.3 151 51.7
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 1.5e-30 137.5 197 47.7
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 1.5e-30 137.5 176 47.2
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 2.0e-30 137.1 152 55.3
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 3.4e-30 136.3 143 51.0
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 3.4e-30 136.3 99 68.7
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 4.4e-30 136.0 179 46.9
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 4.4e-30 136.0 118 61.9
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 5.8e-30 135.6 143 53.1
PSO063G4631 Papaver somniferum HOM05D005768 ORTHO05D007100 9.8e-30 134.8 136 55.1
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 1.7e-29 134.0 129 54.3
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 1.7e-29 134.0 129 54.3
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 1.7e-29 134.0 129 54.3
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 1.7e-29 134.0 127 55.9
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 2.2e-29 133.7 99 68.7
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 3.7e-29 132.9 135 53.3
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 4.9e-29 132.5 188 44.7
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 8.3e-29 131.7 152 48.7
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 1.1e-28 131.3 158 48.7
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 1.4e-28 131.0 189 47.6
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 1.9e-28 130.6 144 53.5
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 3.2e-28 129.8 145 51.7
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 4.1e-28 129.4 167 47.9
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 5.4e-28 129.0 144 50.0
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 9.2e-28 128.3 189 44.4
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 9.2e-28 128.3 144 53.5
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 1.6e-27 127.5 150 50.7
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 2.7e-27 126.7 143 50.3
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 3.5e-27 126.3 133 56.4
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 6.0e-27 125.6 199 42.2
Ca_05797_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 1.0e-26 124.8 129 56.6
ClCG02G014210 Citrullus lanatus HOM05D005768 ORTHO05D007100 1.7e-26 124.0 132 51.5
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 1.7e-26 124.0 189 46.6
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 2.3e-26 123.6 188 45.7
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 2.3e-26 123.6 119 58.8
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 8.6e-26 121.7 125 52.8
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 1.9e-25 120.6 119 58.0
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 2.5e-25 120.2 135 54.1
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 7.3e-25 118.6 164 47.6
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 9.5e-25 118.2 117 55.6
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 1.6e-24 117.5 118 51.7
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 2.1e-24 117.1 135 49.6
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 6.2e-24 115.5 149 50.3
HPP92_009604 Vanilla planifolia HOM05D005768 ORTHO05D007100 8.9e-23 111.7 146 45.2
FvH4_2g35150 Fragaria vesca HOM05D005768 ORTHO05D007100 1.7e-21 107.5 89 62.9
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 1.1e-20 104.8 103 54.4
BcaC05g25998 Brassica carinata HOM05D005768 ORTHO05D007100 5.4e-20 102.4 60 81.7
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 3.5e-19 99.8 119 47.1
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 3.3e-17 93.2 85 57.6
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 6.8e-15 85.5 129 40.3
HanXRQChr14g0439211 Helianthus annuus HOM05D005768 ORTHO05D007100 1.2e-14 84.7 87 50.6
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 3.4e-14 83.2 149 36.9
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 4.4e-14 82.8 116 44.0
DCAR_003074 Daucus carota HOM05D001613 ORTHO05D001556 2.2e-13 80.5 76 56.6
Oeu002722.1 Olea europaea HOM05D005768 ORTHO05D007100 4.1e-12 76.3 74 54.1
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 1.0e-10 71.6 69 50.7
C02p33000 Brassica napus HOM05D005768 ORTHO05D041760 4.7e-08 62.8 43 69.8
BolC2t09396H Brassica oleracea HOM05D005768 ORTHO05D041760 4.7e-08 62.8 43 69.8
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 1.8e-07 60.8 115 46.1
CBR_g130 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-06 58.2 84 38.1
CDE02G0943 Ceratophyllum demersum HOM05D005768 ORTHO05D007100 2.6e-06 57.0 52 59.6
SEGI_03586 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 2.6e-06 57.0 44 56.8


User provided reference genes

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