Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 6.9e-102 374.0 195 100.0
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 9.1e-86 320.5 195 88.2
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 1.4e-81 306.6 195 86.2
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 5.9e-77 291.2 197 85.3
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 5.9e-77 291.2 197 85.3
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 1.7e-76 289.7 197 84.8
Sp1g17840 Schrenkiella parvula HOM05D009961 ORTHO05D008483 4.2e-75 285.0 197 82.2
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 6.8e-73 277.7 195 75.4
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 2.6e-72 275.8 194 75.8
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 5.7e-72 274.6 195 74.4
Thhalv10008606m.g Eutrema salsugineum HOM05D009961 ORTHO05D008483 5.7e-72 274.6 193 79.3
CARHR020550 Cardamine hirsuta HOM05D009961 ORTHO05D008483 1.3e-71 273.5 197 77.2
AL1G32880 Arabidopsis lyrata HOM05D009961 ORTHO05D008483 2.7e-69 265.8 197 76.1
AT1G20070 Arabidopsis thaliana HOM05D009961 ORTHO05D008483 7.8e-69 264.2 197 73.6
C07p23380 Brassica napus HOM05D009961 ORTHO05D008483 2.3e-65 252.7 182 74.2
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 2.3e-65 252.7 198 73.2
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 7.8e-61 237.7 196 70.4
C08p19900 Brassica napus HOM05D009961 ORTHO05D008483 1.9e-54 216.5 197 68.0
BolC8t49628H Brassica oleracea HOM05D009961 ORTHO05D008483 1.9e-54 216.5 197 68.0
BcaC07g39017 Brassica carinata HOM05D009961 ORTHO05D008483 7.0e-54 214.5 197 68.0
BraA08t34889Z Brassica rapa HOM05D009961 ORTHO05D008483 3.5e-53 212.2 180 68.3
Aa31LG7G4510 Aethionema arabicum HOM05D009961 ORTHO05D008483 6.0e-53 211.5 224 61.2
A08p29520 Brassica napus HOM05D009961 ORTHO05D008483 3.5e-45 185.7 196 60.2
BcaC05g25906 Brassica carinata HOM05D009961 ORTHO05D008483 1.5e-27 127.1 90 80.0
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 3.1e-25 119.4 206 44.2
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 1.0e-12 77.8 233 34.3
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 5.6e-11 72.0 142 35.2
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 7.4e-11 71.6 201 34.8
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 1.3e-10 70.9 250 32.8
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 2.1e-10 70.1 67 55.2
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 2.1e-10 70.1 67 55.2
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 2.1e-10 70.1 145 39.3
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 2.8e-10 69.7 245 33.1
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.8e-10 69.7 77 51.9
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 4.8e-10 68.9 177 33.9
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 4.8e-10 68.9 48 66.7
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 4.8e-10 68.9 201 32.3
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 4.8e-10 68.9 140 37.1
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 6.2e-10 68.6 142 35.9
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 8.2e-10 68.2 168 35.1
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 8.2e-10 68.2 86 46.5
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 1.1e-09 67.8 142 36.6
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.4e-09 67.4 168 35.1
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 1.4e-09 67.4 146 36.3
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 1.4e-09 67.4 144 34.0
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 1.4e-09 67.4 227 31.7
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 1.8e-09 67.0 154 32.5
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 1.8e-09 67.0 158 33.5
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 3.1e-09 66.2 58 62.1
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 3.1e-09 66.2 48 64.6
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 4.0e-09 65.9 47 66.0
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 4.0e-09 65.9 168 33.9
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 4.0e-09 65.9 242 33.1
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 4.0e-09 65.9 244 31.6
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 9.0e-09 64.7 198 31.8
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 9.0e-09 64.7 55 61.8
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.5e-08 63.9 45 64.4
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 1.5e-08 63.9 209 31.1
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 1.5e-08 63.9 218 32.6
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.0e-08 63.5 58 58.6
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 3.4e-08 62.8 236 28.4
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 3.4e-08 62.8 198 34.3
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.4e-08 62.8 167 31.7
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 3.4e-08 62.8 46 67.4
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.5e-08 62.4 58 58.6
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 4.5e-08 62.4 243 33.3
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 5.8e-08 62.0 226 31.9
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 5.8e-08 62.0 57 54.4
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 5.8e-08 62.0 216 33.8
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 5.8e-08 62.0 202 33.7
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 7.6e-08 61.6 139 35.3
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 1.3e-07 60.8 164 34.8
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 1.7e-07 60.5 54 59.3
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 1.7e-07 60.5 46 67.4
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 1.7e-07 60.5 206 33.0
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 1.7e-07 60.5 255 29.0
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 2.2e-07 60.1 233 29.6
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 2.2e-07 60.1 156 32.7
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 2.2e-07 60.1 50 60.0
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 3.8e-07 59.3 58 53.4
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 3.8e-07 59.3 171 32.7
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 4.9e-07 58.9 149 31.5
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 4.9e-07 58.9 228 29.8
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 6.5e-07 58.5 215 33.0
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 6.5e-07 58.5 46 67.4
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 6.5e-07 58.5 46 67.4
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 8.4e-07 58.2 212 33.5
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 8.4e-07 58.2 56 55.4
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 8.4e-07 58.2 204 32.8
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 1.1e-06 57.8 53 56.6
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 1.4e-06 57.4 63 47.6
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 2.5e-06 56.6 211 32.7
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 2.5e-06 56.6 187 31.0
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 3.2e-06 56.2 140 34.3
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 3.2e-06 56.2 200 32.5
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 5.5e-06 55.5 240 31.2
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 7.1e-06 55.1 166 33.7
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 9.3e-06 54.7 167 34.1
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 9.3e-06 54.7 189 30.7


User provided reference genes

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