Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 1.1e-218 763.1 393 100.0
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 1.4e-215 752.7 393 98.7
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 5.7e-204 714.1 421 89.5
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 5.7e-204 714.1 421 89.5
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 9.7e-204 713.4 421 89.5
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 1.2e-180 636.7 414 82.4
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 8.6e-176 620.5 392 81.1
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 7.3e-175 617.5 420 76.9
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 2.5e-167 592.4 401 77.1
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 3.3e-167 592.0 394 77.2
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 9.5e-167 590.5 401 76.8
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 2.6e-164 582.4 417 73.4
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 1.3e-147 526.9 395 69.4
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 2.1e-145 519.6 396 66.2
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 5.5e-130 468.4 391 60.4
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 6.0e-129 464.9 389 60.4
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 1.9e-119 433.3 389 57.3
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 4.3e-119 432.2 389 56.0
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 4.8e-118 428.7 387 55.0
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 6.3e-118 428.3 390 55.6
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.2e-116 424.1 390 55.9
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 1.5e-116 423.7 396 54.8
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 2.6e-116 422.9 390 54.6
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 4.5e-116 422.2 390 55.9
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 4.5e-116 422.2 389 56.6
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 4.5e-116 422.2 389 54.5
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 7.6e-116 421.4 390 55.4
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 7.6e-116 421.4 390 55.1
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 7.6e-116 421.4 390 55.6
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 1.0e-115 421.0 389 56.6
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 1.7e-115 420.2 392 54.6
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 3.8e-115 419.1 396 54.0
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.4e-114 417.2 390 55.4
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 1.9e-114 416.8 390 53.8
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 5.5e-114 415.2 389 55.3
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 2.1e-113 413.3 396 54.3
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 2.7e-113 412.9 389 55.8
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 3.6e-113 412.5 391 54.2
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 4.6e-113 412.1 389 54.5
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 6.1e-113 411.8 396 54.3
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 5.1e-112 408.7 396 54.3
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 1.1e-111 407.5 390 50.8
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 3.3e-111 406.0 389 52.4
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 7.4e-111 404.8 389 52.4
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 9.7e-111 404.4 389 53.5
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 1.6e-110 403.7 391 53.5
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 2.8e-110 402.9 389 50.9
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 6.3e-110 401.7 389 52.4
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 5.3e-109 398.7 390 51.5
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 6.9e-109 398.3 376 54.8
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 1.5e-108 397.1 348 57.8
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 1.5e-108 397.1 389 50.4
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 7.7e-108 394.8 390 51.0
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 1.0e-107 394.4 391 49.6
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 1.7e-107 393.7 390 50.8
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 1.7e-107 393.7 390 50.8
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 2.2e-107 393.3 390 49.0
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 2.9e-107 392.9 391 49.9
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 8.5e-107 391.3 389 51.7
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 1.9e-106 390.2 391 49.1
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 3.2e-106 389.4 390 49.7
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 2.1e-105 386.7 390 50.0
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 3.6e-105 386.0 389 49.4
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 6.1e-105 385.2 392 48.0
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 7.9e-105 384.8 390 49.2
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 1.0e-104 384.4 389 49.4
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 6.7e-104 381.7 393 48.9
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 1.1e-103 380.9 391 48.3
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 1.3e-102 377.5 388 52.3
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 2.8e-102 376.3 388 49.5
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 3.1e-101 372.9 375 49.6
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 6.9e-101 371.7 388 47.4
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 1.2e-100 370.9 390 49.7
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 3.4e-100 369.4 390 49.5
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 1.4e-98 364.0 387 48.1
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 2.5e-98 363.2 389 47.8
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 7.9e-97 358.2 385 48.1
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 1.4e-96 357.5 355 49.3
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 5.2e-96 355.5 388 48.2
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 1.5e-95 354.0 389 46.0
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 2.8e-94 349.7 397 48.9
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 4.1e-93 345.9 396 46.2
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 5.3e-93 345.5 397 48.4
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 7.0e-93 345.1 390 48.7
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 1.3e-91 340.9 389 42.7
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 1.7e-91 340.5 389 44.2
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 1.7e-91 340.5 394 42.6
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 2.9e-91 339.7 389 42.9
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 1.5e-90 337.4 392 44.9
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 4.2e-90 335.9 405 44.0
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 1.2e-89 334.3 384 45.8
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 2.7e-89 333.2 400 45.0
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 1.2e-87 327.8 389 42.9
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 3.3e-87 326.2 393 42.5
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 9.7e-87 324.7 389 43.2
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.2e-86 323.6 392 43.6
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 1.1e-85 321.2 390 41.5
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 9.1e-85 318.2 387 42.1
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 9.1e-85 318.2 393 41.5
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 7.7e-84 315.1 391 42.7
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 4.4e-79 299.3 390 42.1
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 8.3e-78 295.0 329 47.7
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.4e-77 294.3 267 53.6
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 4.1e-77 292.7 260 55.4
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 5.9e-76 288.9 389 41.6
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 5.9e-76 288.9 385 41.3
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.3e-75 287.7 389 41.1
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 1.4e-72 277.7 375 40.5
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 1.8e-72 277.3 394 48.7
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 8.8e-72 275.0 308 48.7
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 3.4e-71 273.1 310 47.7
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 3.7e-62 243.0 305 44.3
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 4.7e-57 226.1 176 61.4
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 3.1e-56 223.4 416 33.2
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 5.6e-50 202.6 267 48.3
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 1.3e-46 191.4 223 43.0
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 8.1e-41 172.2 388 29.6
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 1.4e-40 171.4 367 31.9
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 4.6e-36 156.4 339 30.7
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 2.0e-31 141.0 187 45.5
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 5.3e-24 116.3 417 27.1
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 7.6e-23 112.5 349 27.5
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 1.3e-19 101.7 180 37.2
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 9.6e-18 95.5 367 24.3
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 9.6e-18 95.5 367 24.3
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 2.1e-17 94.4 176 36.4
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 3.2e-13 80.5 265 26.4
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 4.2e-13 80.1 105 41.0
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 4.2e-13 80.1 337 25.5
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 2.1e-09 67.8 277 25.3
AagrBONN_evm.TU.Sc2ySwM_362.2581 Anthoceros agrestis HOM05D002504 ORTHO05D007555 2.9e-06 57.4 192 27.1


User provided reference genes

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