Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 1.2e-97 359.8 176 100.0
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 1.2e-97 359.8 176 100.0
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 2.0e-95 352.4 176 98.3
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 2.0e-95 352.4 176 98.3
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 9.1e-93 343.6 176 97.2
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 1.4e-90 336.3 178 95.5
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 7.2e-90 334.0 176 93.2
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 9.4e-90 333.6 176 94.3
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 1.2e-89 333.2 176 93.2
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 2.3e-88 328.9 176 93.2
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 3.3e-87 325.1 176 90.9
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 8.2e-86 320.5 177 90.4
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 1.1e-85 320.1 172 92.4
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 7.0e-85 317.4 174 90.8
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 1.2e-84 316.6 171 91.2
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 1.2e-84 316.6 171 91.2
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 3.5e-76 288.5 176 85.2
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 7.0e-61 237.7 187 67.4
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 1.6e-57 226.5 135 83.0
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 2.8e-57 225.7 116 90.5
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 7.0e-53 211.1 187 62.0
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 2.7e-52 209.1 187 61.5
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 1.0e-51 207.2 132 77.3
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 1.7e-51 206.5 187 60.4
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 3.0e-51 205.7 184 62.0
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 6.6e-51 204.5 127 76.4
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.5e-50 203.4 181 60.8
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 1.9e-50 203.0 189 60.8
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 2.5e-50 202.6 186 59.7
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 2.5e-50 202.6 189 58.2
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 2.5e-50 202.6 189 58.2
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 9.5e-50 200.7 124 78.2
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 1.2e-49 200.3 189 59.8
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 1.6e-49 199.9 169 64.5
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 1.6e-49 199.9 129 76.0
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 1.6e-49 199.9 184 59.8
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 2.1e-49 199.5 183 59.0
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 2.8e-49 199.1 176 62.5
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 2.8e-49 199.1 169 62.7
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 3.6e-49 198.7 135 73.3
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 3.6e-49 198.7 187 56.7
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 4.7e-49 198.4 127 74.8
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 6.2e-49 198.0 120 79.2
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 6.2e-49 198.0 120 79.2
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 8.0e-49 197.6 143 69.9
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 1.1e-48 197.2 186 59.1
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 1.1e-48 197.2 188 58.5
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 1.8e-48 196.4 171 62.6
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 2.3e-48 196.1 120 78.3
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 3.1e-48 195.7 160 65.6
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 3.1e-48 195.7 161 65.8
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 4.0e-48 195.3 150 68.0
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 5.2e-48 194.9 182 56.0
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 5.2e-48 194.9 161 65.8
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 5.2e-48 194.9 141 67.4
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 5.2e-48 194.9 120 77.5
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 5.2e-48 194.9 186 59.1
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 1.2e-47 193.7 188 59.6
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 1.2e-47 193.7 186 55.4
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 1.5e-47 193.4 117 78.6
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 2.0e-47 193.0 177 62.1
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 2.6e-47 192.6 183 58.5
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 2.6e-47 192.6 184 58.2
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 3.4e-47 192.2 124 73.4
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 3.4e-47 192.2 124 73.4
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 4.4e-47 191.8 157 64.3
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 4.4e-47 191.8 183 58.5
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 7.5e-47 191.0 189 58.2
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 1.3e-46 190.3 187 58.8
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 1.7e-46 189.9 179 57.5
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 2.9e-46 189.1 181 56.4
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 2.9e-46 189.1 187 56.7
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 3.7e-46 188.7 186 58.1
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 3.7e-46 188.7 117 75.2
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 4.9e-46 188.3 186 57.5
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 6.4e-46 188.0 186 56.5
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 6.4e-46 188.0 186 57.5
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 8.3e-46 187.6 186 57.5
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 1.4e-45 186.8 111 78.4
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 1.9e-45 186.4 183 60.1
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 3.2e-45 185.7 183 57.4
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 3.2e-45 185.7 128 71.9
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 3.2e-45 185.7 188 55.9
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 4.1e-45 185.3 183 60.1
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 4.1e-45 185.3 182 56.6
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 9.2e-45 184.1 129 69.8
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 9.2e-45 184.1 175 56.6
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 9.2e-45 184.1 188 55.9
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 9.2e-45 184.1 183 55.7
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 1.2e-44 183.7 127 71.7
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 3.5e-44 182.2 183 54.6
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 6.0e-44 181.4 178 58.4
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 1.7e-43 179.9 162 59.9
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 5.0e-43 178.3 127 70.1
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 6.6e-43 177.9 107 76.6
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.1e-42 177.2 114 73.7
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 4.7e-41 171.8 115 71.3
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 3.1e-40 169.1 173 55.5
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 1.9e-34 149.8 111 63.1
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 2.5e-34 149.4 145 52.4
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 8.1e-33 144.4 89 73.0
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 1.7e-30 136.7 179 52.5
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 9.6e-26 120.9 116 54.3
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 4.4e-23 112.1 111 50.5
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 6.0e-20 101.7 97 47.4
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 6.0e-20 101.7 61 82.0
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 1.3e-19 100.5 88 52.3
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 7.3e-18 94.7 119 47.1
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 5.8e-15 85.1 125 44.8
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 1.3e-09 67.4 63 63.5
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 5.8e-07 58.5 46 60.9


User provided reference genes

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