Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p14310 Brassica napus HOM05D007478 ORTHO05D001700 1.3e-88 329.7 175 100.0
BraA06t24560Z Brassica rapa HOM05D007478 ORTHO05D001700 3.3e-87 325.1 175 98.3
BcaC05g25723 Brassica carinata HOM05D007478 ORTHO05D001700 5.7e-79 297.7 175 93.7
BolC5t30355H Brassica oleracea HOM05D007478 ORTHO05D001700 5.7e-79 297.7 175 93.7
C05p16570 Brassica napus HOM05D007478 ORTHO05D001700 1.3e-78 296.6 175 92.6
BcaB07g31840 Brassica carinata HOM05D007478 ORTHO05D001700 1.7e-78 296.2 178 88.2
Sp1g16260 Schrenkiella parvula HOM05D007478 ORTHO05D001700 1.1e-77 293.5 179 84.4
Thhalv10009618m.g Eutrema salsugineum HOM05D007478 ORTHO05D001700 8.5e-75 283.9 180 80.6
C08p43450 Brassica napus HOM05D007478 ORTHO05D001700 2.5e-74 282.3 179 82.1
BolC8t51893H Brassica oleracea HOM05D007478 ORTHO05D001700 2.5e-74 282.3 179 82.1
AL1G30670 Arabidopsis lyrata HOM05D007478 ORTHO05D001700 1.0e-72 276.9 179 78.8
A09p60000 Brassica napus HOM05D007478 ORTHO05D001700 1.5e-71 273.1 184 84.2
BraA09t41370Z Brassica rapa HOM05D007478 ORTHO05D001700 1.5e-71 273.1 184 84.2
AT1G18290 Arabidopsis thaliana HOM05D007478 ORTHO05D001700 4.1e-69 265.0 179 76.5
Carub.0001s1791 Capsella rubella HOM05D007478 ORTHO05D001700 3.5e-68 261.9 181 82.3
CARHR018850 Cardamine hirsuta HOM05D007478 ORTHO05D001700 1.7e-67 259.6 179 81.0
BcaB03g12972 Brassica carinata HOM05D007478 ORTHO05D001700 4.7e-65 251.5 175 76.6
A08p30470 Brassica napus HOM05D007478 ORTHO05D001700 6.7e-64 247.7 175 80.0
BraA08t34979Z Brassica rapa HOM05D007478 ORTHO05D001700 6.7e-64 247.7 175 80.0
BcaC07g38898 Brassica carinata HOM05D007478 ORTHO05D001700 1.1e-63 246.9 175 80.0
C08p18500 Brassica napus HOM05D007478 ORTHO05D001700 1.1e-63 246.9 175 80.0
BolC8t49482H Brassica oleracea HOM05D007478 ORTHO05D001700 1.1e-63 246.9 175 80.0
BcaNung05439 Brassica carinata HOM05D007478 ORTHO05D001700 1.6e-52 209.9 175 68.0
THA.LOC104812173 Tarenaya hassleriana HOM05D007478 ORTHO05D001700 3.4e-47 192.2 184 66.3
BcaC07g41336 Brassica carinata HOM05D007478 ORTHO05D001700 8.0e-33 144.4 82 91.5
Thecc.03G058400 Theobroma cacao HOM05D007478 ORTHO05D001700 7.8e-28 127.9 178 39.9
COL.COLO4_05000 Corchorus olitorius HOM05D007478 ORTHO05D001700 2.3e-27 126.3 178 39.3
PGR083G2359 Punica granatum HOM05D007478 ORTHO05D001700 1.1e-26 124.0 177 37.9
Potri.012G045600 Populus trichocarpa HOM05D007478 ORTHO05D001700 1.5e-26 123.6 179 39.1
FAN08G3433 Fragaria x ananassa HOM05D007478 ORTHO05D001700 3.3e-26 122.5 186 41.4
Eucgr.B00987 Eucalyptus grandis HOM05D007478 ORTHO05D001700 7.3e-26 121.3 176 38.1
CiPaw.15G144400 Carya illinoinensis HOM05D007478 ORTHO05D001700 1.2e-25 120.6 180 38.9
FAN13G0345 Fragaria x ananassa HOM05D007478 ORTHO05D001700 1.2e-25 120.6 184 40.8
Potri.015G036800 Populus trichocarpa HOM05D007478 ORTHO05D001700 1.2e-25 120.6 178 38.8
Eucgr.B00885 Eucalyptus grandis HOM05D007478 ORTHO05D001700 1.6e-25 120.2 176 37.5
FAN18G0488 Fragaria x ananassa HOM05D007478 ORTHO05D001700 1.6e-25 120.2 184 40.8
Lj4g0014270 Lotus japonicus HOM05D007478 ORTHO05D001700 1.6e-25 120.2 178 41.0
FvH4_5g17470 Fragaria vesca HOM05D007478 ORTHO05D001700 3.6e-25 119.0 184 40.2
Cpa.g.sc3.382 Carica papaya HOM05D007478 ORTHO05D001700 4.7e-25 118.6 182 39.0
Lalb_Chr09g0330341 Lupinus albus HOM05D007478 ORTHO05D001700 6.2e-25 118.2 174 39.1
Sc15g0005840 Simmondsia chinensis HOM05D007478 ORTHO05D001700 6.2e-25 118.2 179 37.4
QL10p030590 Quercus lobata HOM05D007478 ORTHO05D001700 1.4e-24 117.1 178 37.6
VMungo0251G2682 Vigna mungo HOM05D007478 ORTHO05D001700 1.8e-24 116.7 178 39.9
Glyma.05G246800 Glycine max HOM05D007478 ORTHO05D001700 2.3e-24 116.3 178 39.3
Sabra12G0031700 Salix brachista HOM05D007478 ORTHO05D001700 2.3e-24 116.3 178 38.2
Prupe.5G234600 Prunus persica HOM05D007478 ORTHO05D001700 3.1e-24 115.9 181 41.4
Ca_17182_v3 Cicer arietinum L. HOM05D007478 ORTHO05D001700 5.2e-24 115.2 178 38.8
Manes.14G171900 Manihot esculenta HOM05D007478 ORTHO05D001700 5.2e-24 115.2 178 40.4
Lalb_Chr05g0221601 Lupinus albus HOM05D007478 ORTHO05D001700 1.5e-23 113.6 174 36.2
Cc04_g06130 Coffea canephora HOM05D007478 ORTHO05D001700 2.0e-23 113.2 178 36.5
Duzib068G1147 Durio zibethinus HOM05D007478 ORTHO05D001700 2.6e-23 112.8 175 37.1
Aqoxy5G00397 Aquilegia oxysepala HOM05D007478 ORTHO05D001700 4.4e-23 112.1 180 36.1
MELO3C017371.2 Cucumis melo HOM05D007478 ORTHO05D001700 4.4e-23 112.1 174 37.4
Hma1.2p1_0163F.1_g073010 Hydrangea macrophylla HOM05D007478 ORTHO05D001700 4.4e-23 112.1 126 46.0
TWI81G0631 Tripterygium wilfordii HOM05D007478 ORTHO05D001700 4.4e-23 112.1 183 37.7
FAN04G1368 Fragaria x ananassa HOM05D007478 ORTHO05D001700 5.8e-23 111.7 134 47.0
Phvul.002G330900 Phaseolus vulgaris HOM05D007478 ORTHO05D001700 9.8e-23 110.9 178 38.2
Psat4g000040 Pisum sativum HOM05D007478 ORTHO05D001700 9.8e-23 110.9 178 37.1
Lalb_Chr16g0386951 Lupinus albus HOM05D007478 ORTHO05D001700 1.7e-22 110.2 176 37.5
ClCG06G014210 Citrullus lanatus HOM05D007478 ORTHO05D001700 2.2e-22 109.8 181 37.6
Glyma.08G055200 Glycine max HOM05D007478 ORTHO05D001700 2.9e-22 109.4 179 38.5
MD06G1228100 Malus domestica HOM05D007478 ORTHO05D001700 3.7e-22 109.0 188 39.4
Sabra15G0031300 Salix brachista HOM05D007478 ORTHO05D001700 8.3e-22 107.8 181 37.0
TAR629G0885 Trochodendron aralioides HOM05D007478 ORTHO05D001700 8.3e-22 107.8 178 38.2
RcHm_v2.0_Chr7g0178221 Rosa chinensis HOM05D007478 ORTHO05D001700 1.1e-21 107.5 184 38.6
Gohir.D12G270300 Gossypium hirsutum HOM05D007478 ORTHO05D001700 1.4e-21 107.1 180 38.3
Gorai.008G290600 Gossypium raimondii HOM05D007478 ORTHO05D001700 1.4e-21 107.1 181 37.0
MD14G1237300 Malus domestica HOM05D007478 ORTHO05D001700 1.4e-21 107.1 184 38.0
Medtr8g107420 Medicago truncatula HOM05D007478 ORTHO05D001700 2.4e-21 106.3 179 36.9
Gohir.A12G269800 Gossypium hirsutum HOM05D007478 ORTHO05D001700 4.1e-21 105.5 181 36.5
Sed0016646 Sechium edule HOM05D007478 ORTHO05D001700 5.4e-21 105.1 174 35.1
TPR.G1399 Trifolium pratense HOM05D007478 ORTHO05D001700 5.4e-21 105.1 178 36.5
GSVIVG01008464001 Vitis vinifera HOM05D007478 ORTHO05D001700 7.1e-21 104.8 129 44.2
EL10As7g23792 Beta vulgaris HOM05D007478 ORTHO05D001700 6.0e-20 101.7 178 32.6
CsaV3_1G004460 Cucumis sativus L. HOM05D007478 ORTHO05D001700 1.7e-19 100.1 118 44.9
MSTRG.9308 Avicennia marina HOM05D007478 ORTHO05D001700 5.1e-19 98.6 176 34.7
Sed0024095 Sechium edule HOM05D007478 ORTHO05D001700 1.1e-18 97.4 182 33.5
BcaC07g41335 Brassica carinata HOM05D007478 ORTHO05D001700 1.6e-17 93.6 61 70.5
Oeu026265.1 Olea europaea HOM05D007478 ORTHO05D001700 2.1e-17 93.2 179 35.2
Oeu046159.1 Olea europaea HOM05D007478 ORTHO05D001700 6.2e-17 91.7 179 33.5
Duzib205G1935 Durio zibethinus HOM05D007478 ORTHO05D001700 1.4e-16 90.5 97 48.5
Rhsim12G0138100 Rhododendron simsii HOM05D007478 ORTHO05D001700 1.8e-16 90.1 196 34.2
MSTRG.4582 Avicennia marina HOM05D007478 ORTHO05D001700 2.3e-16 89.7 176 34.7
Haze_18881 Corylus avellana HOM05D007478 ORTHO05D001700 3.1e-16 89.4 137 39.4
Migut.D01319 Erythranthe guttata HOM05D007478 ORTHO05D001700 6.8e-16 88.2 176 34.1
Dinv08199 Davidia involucrata HOM05D007478 ORTHO05D001700 1.2e-15 87.4 169 34.9
MBI16_g21180_MAGBIO Magnolia biondii HOM05D007478 ORTHO05D001700 1.3e-14 84.0 141 36.9
SalBow1G4808 Salvia bowleyana HOM05D007478 ORTHO05D001700 1.3e-14 84.0 180 36.1
Manes.06G004900 Manihot esculenta HOM05D007478 ORTHO05D001700 1.4e-13 80.5 140 34.3
SGA_v2.0_scaffold172G39020 Striga asiatica HOM05D007478 ORTHO05D001700 2.4e-13 79.7 179 33.0
HPP92_004882 Vanilla planifolia HOM05D007478 ORTHO05D001700 5.4e-13 78.6 191 33.0
ATR0326G051 Amborella trichopoda HOM05D001935 ORTHO05D001700 1.2e-12 77.4 182 32.4
Zm00001eb125870 Zea mays HOM05D007478 ORTHO05D001700 1.6e-12 77.0 106 40.6
HPP92_004837 Vanilla planifolia HOM05D007478 ORTHO05D001700 2.7e-12 76.3 191 31.4
Zm00001eb126350 Zea mays HOM05D007478 ORTHO05D001700 4.6e-12 75.5 110 40.9
HPP92_004839 Vanilla planifolia HOM05D007478 ORTHO05D001700 6.0e-12 75.1 188 31.4
Os01g0121000 Oryza sativa ssp. japonica HOM05D007478 ORTHO05D001700 7.8e-12 74.7 117 41.0
QL04p087054 Quercus lobata HOM05D001935 ORTHO05D001700 3.0e-11 72.8 82 45.1
AUR62042856 Chenopodium quinoa HOM05D007478 ORTHO05D001700 1.9e-10 70.1 89 44.9
CANSAT80G2839 Cannabis sativa HOM05D007478 ORTHO05D001700 4.3e-10 68.9 78 43.6
Zm00001eb334830 Zea mays HOM05D007478 ORTHO05D001700 4.3e-10 68.9 110 38.2
SEGI_14616 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 4.7e-09 65.5 179 26.8
SEGI_32719 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 8.1e-09 64.7 191 29.8
SEGI_04656 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 1.8e-08 63.5 196 28.1
Nitab4.5_0000414g0010 Nicotiana tabacum HOM05D001935 ORTHO05D001700 2.0e-07 60.1 175 28.6
Nitab4.5_0001648g0030 Nicotiana tabacum HOM05D001935 ORTHO05D001700 5.8e-07 58.5 178 28.7
SEGI_39105 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 1.3e-06 57.4 193 28.5
Solyc04g007580.1 Solanum lycopersicum HOM05D001935 ORTHO05D001700 4.9e-06 55.5 178 29.2


User provided reference genes

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