Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 4.5e-222 774.2 381 100.0
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 1.0e-213 746.5 379 96.0
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 3.8e-213 744.6 379 96.0
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 8.5e-213 743.4 379 95.8
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 9.1e-207 723.4 381 93.4
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 7.8e-190 667.2 378 86.0
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 1.2e-185 653.3 384 82.6
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 2.7e-182 642.1 383 81.7
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 1.6e-171 606.3 383 75.5
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 3.1e-170 602.1 367 78.2
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 4.0e-170 601.7 383 76.2
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 8.3e-168 594.0 383 74.7
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 1.2e-166 590.1 382 75.1
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 1.2e-166 590.1 380 75.0
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 1.2e-166 590.1 382 75.1
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 2.1e-166 589.3 319 86.8
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 2.7e-166 589.0 382 74.9
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 2.7e-166 589.0 382 74.9
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 4.6e-166 588.2 376 75.8
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 4.6e-166 588.2 382 74.9
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 3.0e-165 585.5 380 74.5
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 3.0e-165 585.5 384 74.7
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 6.6e-165 584.3 382 74.1
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 1.1e-164 583.6 384 75.3
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 3.2e-159 565.5 320 81.6
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 3.3e-156 555.4 321 82.6
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 2.8e-155 552.4 381 70.9
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 3.6e-155 552.0 380 70.0
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 4.7e-155 551.6 318 83.0
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 9.0e-154 547.4 319 81.5
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 4.4e-153 545.0 323 79.9
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 6.4e-152 541.2 381 68.8
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 9.3e-151 537.3 381 68.5
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 2.7e-150 535.8 373 70.5
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 4.6e-150 535.0 319 79.9
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 6.0e-150 534.6 382 68.3
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 1.0e-149 533.9 384 67.2
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 3.0e-149 532.3 377 68.2
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 5.1e-149 531.6 384 67.2
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 1.1e-148 530.4 384 67.4
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 1.9e-148 529.6 379 67.5
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 4.3e-148 528.5 380 68.9
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 9.6e-148 527.3 377 67.4
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 2.8e-147 525.8 384 66.4
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 3.6e-147 525.4 377 67.6
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 8.1e-147 524.2 323 75.9
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 8.1e-147 524.2 385 67.0
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 1.4e-146 523.5 378 68.0
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 1.8e-146 523.1 378 68.0
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 3.1e-146 522.3 402 63.9
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 4.0e-146 521.9 376 66.2
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 5.3e-146 521.5 377 68.2
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 6.9e-146 521.2 309 75.7
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 1.5e-145 520.0 384 68.8
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 1.5e-145 520.0 380 67.1
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 1.5e-145 520.0 340 71.5
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 1.5e-145 520.0 384 68.0
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 2.6e-145 519.2 382 64.7
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 3.4e-145 518.8 378 67.2
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.4e-145 518.8 376 67.8
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 3.4e-145 518.8 377 66.8
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 4.5e-145 518.5 321 74.8
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 5.8e-145 518.1 385 66.2
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 5.8e-145 518.1 377 67.4
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 5.8e-145 518.1 378 67.2
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 9.9e-145 517.3 376 68.1
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 1.7e-144 516.5 377 65.8
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 2.2e-144 516.2 373 67.3
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 2.9e-144 515.8 380 66.6
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 3.8e-144 515.4 385 65.7
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 4.9e-144 515.0 385 66.0
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 4.9e-144 515.0 385 66.2
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 6.4e-144 514.6 377 65.5
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 8.4e-144 514.2 375 66.7
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 8.4e-144 514.2 378 67.5
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 1.4e-143 513.5 380 67.1
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 1.9e-143 513.1 318 72.0
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.2e-143 512.3 379 66.5
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 4.2e-143 511.9 321 71.7
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 5.4e-143 511.5 309 75.7
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 1.2e-142 510.4 374 64.7
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 1.6e-142 510.0 376 65.2
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 2.1e-142 509.6 382 66.0
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 2.7e-142 509.2 327 72.5
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 2.7e-142 509.2 393 63.9
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 2.7e-142 509.2 381 65.6
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 2.7e-142 509.2 358 69.0
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 1.0e-141 507.3 376 66.2
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 3.9e-141 505.4 382 64.9
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 3.9e-141 505.4 375 66.9
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 6.7e-141 504.6 377 64.2
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 8.7e-141 504.2 377 64.5
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 8.7e-141 504.2 374 65.2
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 8.7e-141 504.2 382 64.7
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 1.1e-140 503.8 404 63.1
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 1.1e-140 503.8 380 64.7
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 1.9e-140 503.1 333 70.3
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 2.5e-140 502.7 313 71.6
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 4.3e-140 501.9 386 64.5
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 9.6e-140 500.7 380 66.3
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 3.7e-139 498.8 326 70.6
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 3.7e-139 498.8 315 72.7
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 1.1e-138 497.3 410 61.2
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.5e-137 493.4 302 73.5
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 2.0e-137 493.0 380 65.3
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 2.0e-137 493.0 377 63.9
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 2.9e-136 489.2 383 65.3
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 2.5e-135 486.1 334 68.0
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 1.2e-134 483.8 317 70.0
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 6.0e-134 481.5 376 61.7
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 3.9e-133 478.8 377 62.9
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 3.9e-133 478.8 303 70.6
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 5.1e-133 478.4 373 63.3
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 9.6e-132 474.2 357 66.9
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 2.8e-131 472.6 344 63.7
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 1.4e-130 470.3 375 61.9
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 5.3e-130 468.4 336 69.3
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 7.6e-129 464.5 336 69.0
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 6.5e-128 461.5 378 62.4
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 8.4e-128 461.1 351 65.5
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 3.2e-127 459.1 388 61.3
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 4.2e-127 458.8 286 74.5
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 3.3e-124 449.1 378 60.8
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 1.1e-122 444.1 351 64.1
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 1.5e-121 440.3 292 67.1
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 1.5e-121 440.3 302 65.9
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.9e-120 436.0 329 66.9
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 1.9e-119 433.3 348 63.5
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 3.9e-117 425.6 326 64.7
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 3.9e-117 425.6 308 62.7
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 9.7e-116 421.0 353 57.2
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 1.3e-112 410.6 241 77.2
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 1.0e-109 401.0 318 58.2
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 3.0e-109 399.4 334 57.2
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 1.3e-104 384.0 287 64.8
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 1.2e-102 377.5 320 55.6
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 1.0e-101 374.4 327 60.9
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 8.2e-99 364.8 305 55.7
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 2.4e-98 363.2 233 69.1
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 5.3e-98 362.1 274 66.4
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.5e-95 354.0 220 74.5
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 9.4e-95 351.3 376 50.8
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 9.4e-87 324.7 236 70.8
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 4.7e-86 322.4 233 64.4
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 5.7e-84 315.5 215 68.8
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 4.1e-82 309.3 199 69.3
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.0e-80 304.7 200 67.5
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 1.4e-74 284.3 342 47.7
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 1.8e-69 267.3 219 63.9
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 1.8e-69 267.3 216 65.7
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 2.0e-68 263.8 345 42.3
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 1.9e-63 247.3 294 44.2
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 5.2e-61 239.2 309 43.0
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 2.0e-60 237.3 336 39.6
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 7.1e-50 202.2 153 66.0
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 6.6e-48 195.7 114 76.3
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 1.2e-41 174.9 132 68.2
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 1.2e-41 174.9 348 35.6
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 7.8e-41 172.2 185 55.1
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 1.3e-40 171.4 132 67.4
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 1.3e-40 171.4 95 86.3
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 5.1e-40 169.5 94 86.2
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 1.1e-39 168.3 132 65.9
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 5.6e-39 166.0 94 84.0
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 2.1e-33 147.5 94 73.4
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 4.8e-30 136.3 102 64.7
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 6.4e-27 125.9 134 53.0
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 8.4e-27 125.6 66 86.4
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 1.1e-26 125.2 94 70.2
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 1.9e-23 114.4 333 27.9
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 1.1e-21 108.6 71 66.2
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 6.9e-21 105.9 69 66.7
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 1.3e-19 101.7 117 51.3
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 2.5e-18 97.4 59 72.9
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 2.7e-17 94.0 51 86.3
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 5.1e-16 89.7 45 82.2
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 3.7e-14 83.6 241 30.7
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 1.2e-12 78.6 41 87.8
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 2.9e-11 73.9 43 76.7
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 2.9e-11 73.9 43 76.7
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 2.9e-11 73.9 47 74.5
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 1.4e-10 71.6 45 68.9
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 1.0e-08 65.5 103 44.7
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 8.7e-08 62.4 33 90.9


User provided reference genes

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