Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 1.9e-55 218.8 97 100.0
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 7.3e-52 206.8 101 94.1
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 2.1e-51 205.3 101 93.1
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 8.1e-51 203.4 102 88.2
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 1.1e-50 203.0 101 89.1
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 1.8e-50 202.2 101 92.1
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 1.8e-50 202.2 101 92.1
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 1.8e-50 202.2 101 87.1
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 3.1e-50 201.4 102 87.3
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 6.8e-50 200.3 101 86.1
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 7.1e-47 190.3 104 83.7
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 1.3e-45 186.0 109 78.0
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 2.5e-44 181.8 104 79.8
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 1.5e-41 172.6 105 72.4
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 1.7e-40 169.1 109 67.9
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 7.1e-39 163.7 110 64.5
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 7.1e-39 163.7 112 64.3
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 2.7e-38 161.8 110 65.5
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 2.7e-38 161.8 110 66.4
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 4.6e-38 161.0 108 68.5
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 4.6e-38 161.0 106 68.9
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 6.0e-38 160.6 100 72.0
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 6.0e-38 160.6 112 64.3
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 1.0e-37 159.8 109 65.1
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 1.0e-37 159.8 112 64.3
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 1.3e-37 159.5 114 63.2
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 1.7e-37 159.1 96 71.9
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 1.7e-37 159.1 106 67.9
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 2.3e-37 158.7 117 60.7
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 3.9e-37 157.9 107 64.5
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 3.9e-37 157.9 108 67.6
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 3.9e-37 157.9 101 69.3
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 3.9e-37 157.9 109 65.1
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 3.9e-37 157.9 113 65.5
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 3.9e-37 157.9 110 64.5
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 5.1e-37 157.5 110 66.4
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 6.6e-37 157.1 110 66.4
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 6.6e-37 157.1 108 66.7
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 8.7e-37 156.8 111 64.0
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 1.1e-36 156.4 105 67.6
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 1.1e-36 156.4 106 63.2
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 1.5e-36 156.0 109 65.1
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 1.5e-36 156.0 105 63.8
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 1.5e-36 156.0 105 67.6
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 1.5e-36 156.0 109 66.1
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 1.9e-36 155.6 110 64.5
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 2.5e-36 155.2 114 64.0
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 2.5e-36 155.2 111 64.0
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 3.3e-36 154.8 110 62.7
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 4.3e-36 154.5 109 65.1
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 4.3e-36 154.5 111 62.2
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 5.6e-36 154.1 118 57.6
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 7.3e-36 153.7 113 61.9
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 9.6e-36 153.3 104 64.4
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 1.3e-35 152.9 112 60.7
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 1.3e-35 152.9 119 56.3
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 1.6e-35 152.5 108 63.0
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 4.8e-35 151.0 107 59.8
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 4.8e-35 151.0 111 62.2
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 4.8e-35 151.0 112 60.7
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.1e-34 149.8 103 62.1
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.1e-34 149.8 112 59.8
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 1.8e-34 149.1 112 58.9
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 5.3e-34 147.5 112 59.8
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 6.9e-34 147.1 119 55.5
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 6.9e-34 147.1 102 64.7
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 9.0e-34 146.7 111 57.7
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 2.6e-33 145.2 115 56.5
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 3.4e-33 144.8 102 63.7
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 4.5e-33 144.4 110 60.0
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 3.8e-32 141.4 115 59.1
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 6.4e-32 140.6 98 62.2
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.4e-31 139.4 110 60.9
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.4e-31 139.4 110 60.9
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 1.9e-31 139.0 114 54.4
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 2.4e-31 138.7 102 59.8
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 2.7e-30 135.2 114 55.3
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 3.5e-30 134.8 107 57.9
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 7.9e-30 133.7 121 51.2
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 6.7e-29 130.6 110 53.6
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 1.5e-28 129.4 94 63.8
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 3.3e-28 128.3 71 76.1
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 7.4e-28 127.1 96 58.3
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 3.7e-27 124.8 105 53.3
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 4.0e-26 121.3 101 51.5
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 9.0e-26 120.2 113 53.1
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 9.6e-20 100.1 121 38.8
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 2.0e-17 92.4 120 38.3
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 3.4e-17 91.7 73 54.8
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 1.1e-15 86.7 97 49.5
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 8.7e-13 77.0 71 46.5
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 8.2e-11 70.5 67 47.8
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.4e-10 68.9 35 74.3
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 2.0e-09 65.9 67 44.8
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.0e-08 63.5 42 69.0


User provided reference genes

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