Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p11330 Brassica napus HOM05D002526 ORTHO05D010157 3.4e-161 571.6 296 100.0
BraA06t24312Z Brassica rapa HOM05D002526 ORTHO05D010157 3.0e-157 558.5 296 98.3
BolC5t30082H Brassica oleracea HOM05D002526 ORTHO05D010157 2.2e-147 525.8 283 96.8
BcaC05g25469 Brassica carinata HOM05D002526 ORTHO05D010157 1.0e-133 480.3 285 90.2
Sp1g13640 Schrenkiella parvula HOM05D002526 ORTHO05D010157 4.9e-131 471.5 277 89.5
Thhalv10008365m.g Eutrema salsugineum HOM05D002526 ORTHO05D010157 7.0e-130 467.6 290 84.8
AL1G27410 Arabidopsis lyrata HOM05D002526 ORTHO05D010157 4.9e-123 444.9 284 83.8
Carub.0001s1507 Capsella rubella HOM05D002526 ORTHO05D010157 1.8e-122 443.0 286 83.2
Aa31LG7G90 Aethionema arabicum HOM05D002526 ORTHO05D010157 5.9e-121 438.0 289 79.2
AT1G15320 Arabidopsis thaliana HOM05D002526 ORTHO05D010157 1.8e-117 426.4 293 79.9
CARHR015850 Cardamine hirsuta HOM05D002526 ORTHO05D010157 1.2e-116 423.7 292 78.8
THA.LOC104812514 Tarenaya hassleriana HOM05D002526 ORTHO05D010157 8.1e-102 374.4 279 69.5
C05p13450 Brassica napus HOM05D002526 ORTHO05D010157 3.9e-96 355.5 183 100.0
TWI18G0347 Tripterygium wilfordii HOM05D002526 ORTHO05D010157 1.3e-70 270.8 266 54.9
BcaC01g00573 Brassica carinata HOM05D002526 ORTHO05D010157 2.1e-65 253.4 142 90.8
CiPaw.01G248800 Carya illinoinensis HOM05D002526 ORTHO05D004039 2.1e-65 253.4 243 54.3
BcaC03g16017 Brassica carinata HOM05D002526 ORTHO05D010157 7.9e-65 251.5 136 92.6
C02p37700 Brassica napus HOM05D002526 ORTHO05D010157 8.7e-64 248.1 264 56.8
BolC4t25223H Brassica oleracea HOM05D002526 ORTHO05D010157 8.7e-64 248.1 267 56.6
BcaC02g09864 Brassica carinata HOM05D002526 ORTHO05D010157 1.1e-63 247.7 261 57.5
Haze_16568 Corylus avellana HOM05D002526 ORTHO05D004039 1.1e-63 247.7 238 53.4
BolC2t09789H Brassica oleracea HOM05D002526 ORTHO05D010157 2.5e-63 246.5 264 56.8
C04p35770 Brassica napus HOM05D002526 ORTHO05D010157 3.3e-63 246.1 267 56.2
C09p66980 Brassica napus HOM05D002526 ORTHO05D010157 5.7e-63 245.4 264 57.2
Nn2g12105 Nelumbo nucifera HOM05D002526 ORTHO05D010157 5.7e-63 245.4 234 56.0
MD17G1213300 Malus domestica HOM05D002526 ORTHO05D010157 7.4e-63 245.0 246 53.7
Potri.001G202300 Populus trichocarpa HOM05D002526 ORTHO05D010157 1.3e-62 244.2 249 53.8
Ciclev10024867m.g Citrus clementina HOM05D002526 ORTHO05D004039 2.1e-62 243.4 245 53.9
Hma1.2p1_0242F.1_g100630 Hydrangea macrophylla HOM05D002526 ORTHO05D010157 2.1e-62 243.4 230 55.2
Atru.chr1.2906 Acer truncatum HOM05D002526 ORTHO05D010157 2.8e-62 243.0 273 50.5
Hund00650 Selenicereus undatus HOM05D002526 ORTHO05D010157 3.7e-62 242.7 243 52.7
RcHm_v2.0_Chr2g0135091 Rosa chinensis HOM05D002526 ORTHO05D010157 4.8e-62 242.3 251 52.2
C03p81490 Brassica napus HOM05D002526 ORTHO05D010157 8.2e-62 241.5 264 56.4
BolC3t20420H Brassica oleracea HOM05D002526 ORTHO05D010157 8.2e-62 241.5 264 56.4
FvH4_6g29541 Fragaria vesca HOM05D002526 ORTHO05D010157 8.2e-62 241.5 242 52.1
FAN14G4319 Fragaria x ananassa HOM05D002526 ORTHO05D010157 8.2e-62 241.5 242 52.1
Duzib192G0551 Durio zibethinus HOM05D002526 ORTHO05D010157 1.1e-61 241.1 226 57.5
Dinv30612 Davidia involucrata HOM05D002526 ORTHO05D004039 1.8e-61 240.4 244 52.9
Hund00651 Selenicereus undatus HOM05D002526 ORTHO05D010157 1.8e-61 240.4 243 52.3
Gohir.A05G122650 Gossypium hirsutum HOM05D002526 ORTHO05D010157 3.1e-61 239.6 256 51.6
Prupe.3G088600 Prunus persica HOM05D002526 ORTHO05D010157 6.9e-61 238.4 251 51.4
CSS0025449 Camellia sinensis var. sinensis HOM05D002526 ORTHO05D004039 9.0e-61 238.0 244 53.3
QL03p020400 Quercus lobata HOM05D002526 ORTHO05D010157 1.2e-60 237.7 278 48.6
QL05p030835 Quercus lobata HOM05D002526 ORTHO05D010157 1.2e-60 237.7 278 48.6
Gorai.009G127500 Gossypium raimondii HOM05D002526 ORTHO05D010157 1.5e-60 237.3 271 48.7
Thecc.06G028700 Theobroma cacao HOM05D002526 ORTHO05D010157 2.9e-59 233.0 217 57.1
Manes.04G112150 Manihot esculenta HOM05D002526 ORTHO05D004039 1.9e-58 230.3 218 56.0
CANSAT56G1960 Cannabis sativa HOM05D002526 ORTHO05D010157 5.5e-58 228.8 226 54.0
GSVIVG01017348001 Vitis vinifera HOM05D002526 ORTHO05D004039 7.2e-58 228.4 232 51.3
vmacro19003 Vaccinium macrocarpon HOM05D002526 ORTHO05D010157 1.2e-57 227.6 223 53.4
COL.COLO4_11933 Corchorus olitorius HOM05D002526 ORTHO05D004039 1.8e-56 223.8 293 46.8
Peaxi162Scf00332g00625 Petunia axillaris HOM05D002526 ORTHO05D010157 3.9e-56 222.6 250 50.4
Nitab4.5_0003463g0050 Nicotiana tabacum HOM05D001442 ORTHO05D001369 1.6e-54 217.2 236 49.2
Lj5A73G68 Lonicera japonica HOM05D002526 ORTHO05D010157 4.8e-54 215.7 238 49.6
PGSC0003DMG400000622 Solanum tuberosum HOM05D002526 ORTHO05D010157 4.8e-54 215.7 227 50.7
Nitab4.5_0008560g0050 Nicotiana tabacum HOM05D001442 ORTHO05D010157 6.3e-54 215.3 209 53.1
Cc04_g04450 Coffea canephora HOM05D002526 ORTHO05D010157 1.1e-53 214.5 201 57.7
CAN.G407.78 Capsicum annuum HOM05D002526 ORTHO05D000105 1.8e-53 213.8 248 48.0
Sopen03g035690 Solanum pennellii HOM05D002526 ORTHO05D010157 4.1e-53 212.6 251 46.6
Solyc03g116770.3 Solanum lycopersicum HOM05D002526 ORTHO05D010157 6.9e-53 211.8 251 46.6
AUR62016503 Chenopodium quinoa HOM05D002526 ORTHO05D010157 2.0e-52 210.3 243 51.9
C03p75300 Brassica napus HOM05D002526 ORTHO05D010157 4.5e-52 209.1 264 51.9
AUR62011678 Chenopodium quinoa HOM05D002526 ORTHO05D010157 1.0e-51 208.0 243 51.9
Oeu045127.1 Olea europaea HOM05D002526 ORTHO05D010157 5.0e-51 205.7 214 54.2
SalBow2G1951 Salvia bowleyana HOM05D002526 ORTHO05D010157 1.1e-50 204.5 221 48.9
Aqoxy7G03644 Aquilegia oxysepala HOM05D002526 ORTHO05D010157 1.4e-50 204.1 240 47.5
SGA_v2.0_scaffold5G02704 Striga asiatica HOM05D002526 ORTHO05D010157 1.4e-50 204.1 227 52.4
Actinidia15756 Actinidia chinensis HOM05D002526 ORTHO05D010157 4.2e-50 202.6 285 43.5
Migut.I00757 Erythranthe guttata HOM05D002526 ORTHO05D010157 6.7e-48 195.3 210 51.0
EL10Ac9g22041 Beta vulgaris HOM05D002526 ORTHO05D010157 1.5e-47 194.1 225 49.8
PGR102G2637 Punica granatum HOM05D002526 ORTHO05D010157 1.5e-47 194.1 242 45.5
Gohir.D05G123550 Gossypium hirsutum HOM05D002526 ORTHO05D010157 2.8e-46 189.9 177 57.1
FAN02G2169 Fragaria x ananassa HOM05D002526 ORTHO05D010157 3.1e-45 186.4 196 50.0
BolC3t19789H Brassica oleracea HOM05D002526 ORTHO05D010157 2.2e-43 180.3 104 89.4
Sc15g0001450 Simmondsia chinensis HOM05D002526 ORTHO05D010157 2.2e-43 180.3 196 50.0
Lsat_1_v5_gn_4_88500 Lactuca sativa HOM05D002526 ORTHO05D010157 3.8e-43 179.5 236 42.8
PSO161G0040 Papaver somniferum HOM05D002526 ORTHO05D010157 2.5e-42 176.8 223 45.7
Actinidia01740 Actinidia chinensis HOM05D002526 ORTHO05D010157 2.7e-41 173.3 229 47.2
ECA232G1362 Erigeron canadensis HOM05D002526 ORTHO05D010157 4.7e-41 172.6 231 43.7
DCAR_025516 Daucus carota HOM05D002526 ORTHO05D004039 1.1e-39 167.9 236 44.9
Ah.01g021710 Amaranthus hybridus HOM05D002526 ORTHO05D010157 4.1e-37 159.5 180 48.3
Cpa.g.sc938.3 Carica papaya HOM05D002526 ORTHO05D010157 5.0e-35 152.5 206 43.2
unitig_0.g1112 Utricularia gibba HOM05D002081 ORTHO05D002088 6.7e-32 142.1 213 39.9
FAN02G0105 Fragaria x ananassa HOM05D002526 ORTHO05D010157 1.2e-25 121.3 106 58.5
SEGI_27567 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 3.8e-19 99.8 203 30.0
SEGI_30845 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 8.6e-19 98.6 203 30.5
HPP92_021873 Vanilla planifolia HOM05D002526 ORTHO05D010157 5.7e-15 85.9 195 32.8
AagrBONN_evm.TU.Sc2ySwM_117.3641 Anthoceros agrestis HOM05D000382 ORTHO05D000623 1.6e-09 67.8 220 26.8
PGSC0003DMG400011102 Solanum tuberosum HOM05D000828 ORTHO05D000623 1.3e-06 58.2 240 27.1
COL.COLO4_12110 Corchorus olitorius HOM05D001914 ORTHO05D000623 2.2e-06 57.4 287 25.4
COL.COLO4_17538 Corchorus olitorius HOM05D000828 ORTHO05D000623 6.4e-06 55.8 207 26.6
A09p40570 Brassica napus HOM05D000252 ORTHO05D040258 8.3e-06 55.5 35 80.0
BraA09t39553Z Brassica rapa HOM05D000252 ORTHO05D040258 8.3e-06 55.5 35 80.0
AUR62000548 Chenopodium quinoa HOM05D000828 ORTHO05D000623 8.3e-06 55.5 277 22.0


User provided reference genes

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