Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p09730 Brassica napus HOM05D007623 ORTHO05D009641 1.1e-153 548.1 437 100.0
BraA06t24162Z Brassica rapa HOM05D007623 ORTHO05D009641 4.7e-152 542.7 437 99.3
C05p11430 Brassica napus HOM05D007623 ORTHO05D009641 4.1e-140 503.1 437 95.0
BolC5t29896H Brassica oleracea HOM05D007623 ORTHO05D009641 7.3e-137 492.3 437 93.8
BcaC05g25269 Brassica carinata HOM05D007623 ORTHO05D009641 7.8e-131 472.2 277 88.8
Thhalv10009738m.g Eutrema salsugineum HOM05D007623 ORTHO05D009641 1.3e-122 444.9 437 80.3
Sp1g12290 Schrenkiella parvula HOM05D007623 ORTHO05D009641 4.0e-119 433.3 279 78.9
BcaB02g06459 Brassica carinata HOM05D007623 ORTHO05D009641 5.8e-118 429.5 455 77.1
AL1G25410 Arabidopsis lyrata HOM05D007623 ORTHO05D009641 3.3e-113 413.7 281 75.1
Carub.0001s1335 Capsella rubella HOM05D007623 ORTHO05D009641 8.1e-112 409.1 280 75.4
Aa31LG7G1940 Aethionema arabicum HOM05D007623 ORTHO05D009641 2.4e-95 354.4 285 64.6
THA.LOC104805220 Tarenaya hassleriana HOM05D007623 ORTHO05D009641 1.2e-94 352.1 282 67.0
Cfa008839 Carpinus fangiana HOM05D007623 ORTHO05D009641 8.8e-58 229.6 272 46.7
Haze_11851 Corylus avellana HOM05D007623 ORTHO05D009641 7.4e-57 226.5 272 47.1
Thecc.02G321100 Theobroma cacao HOM05D007623 ORTHO05D009641 9.7e-57 226.1 285 45.6
Gorai.005G147900 Gossypium raimondii HOM05D007623 ORTHO05D009641 4.8e-56 223.8 285 46.7
Gohir.A03G106900 Gossypium hirsutum HOM05D007623 ORTHO05D009641 1.4e-55 222.2 285 46.3
CiPaw.06G095500 Carya illinoinensis HOM05D007623 ORTHO05D009641 4.1e-55 220.7 271 45.8
MD16G1054700 Malus domestica HOM05D007623 ORTHO05D009641 1.2e-54 219.2 284 44.4
COL.COLO4_27779 Corchorus olitorius HOM05D007623 ORTHO05D009641 1.3e-53 215.7 269 46.1
ClCG05G023480 Citrullus lanatus HOM05D007623 ORTHO05D009641 1.1e-52 212.6 273 43.6
CARHR014000 Cardamine hirsuta HOM05D007623 ORTHO05D009641 2.5e-52 211.5 152 72.4
Manes.14G091100 Manihot esculenta HOM05D007623 ORTHO05D009641 4.2e-52 210.7 285 43.5
Prupe.2G062100 Prunus persica HOM05D007623 ORTHO05D009641 1.6e-51 208.8 284 41.2
GSVIVG01010112001 Vitis vinifera HOM05D007623 ORTHO05D009641 1.0e-50 206.1 269 43.9
MELO3C026661.2 Cucumis melo HOM05D007623 ORTHO05D009641 3.0e-50 204.5 267 44.6
CANSAT64G0130 Cannabis sativa HOM05D007623 ORTHO05D009641 5.2e-50 203.8 272 43.0
CsaV3_3G030580 Cucumis sativus L. HOM05D007623 ORTHO05D009641 1.1e-49 202.6 269 45.0
Dinv34009 Davidia involucrata HOM05D007623 ORTHO05D009641 3.3e-49 201.1 270 41.5
Sabra10G0105800 Salix brachista HOM05D007623 ORTHO05D009641 4.4e-49 200.7 269 42.8
FAN12G1349 Fragaria x ananassa HOM05D007623 ORTHO05D009641 5.7e-49 200.3 279 41.6
FvH4_4g29120 Fragaria vesca HOM05D007623 ORTHO05D009641 9.7e-49 199.5 279 41.6
SHI04831 Sapria himalayana HOM05D007623 ORTHO05D009641 1.7e-48 198.7 228 45.2
AT1G13630 Arabidopsis thaliana HOM05D007623 ORTHO05D009641 6.3e-48 196.8 112 83.0
FAN22G0497 Fragaria x ananassa HOM05D007623 ORTHO05D009641 4.1e-47 194.1 279 40.5
FAN17G1802 Fragaria x ananassa HOM05D007623 ORTHO05D009641 7.0e-47 193.4 279 40.5
Sed0026487 Sechium edule HOM05D007623 ORTHO05D009641 1.2e-46 192.6 285 41.1
Atru.chr11.1545 Acer truncatum HOM05D007623 ORTHO05D009641 1.0e-45 189.5 288 40.3
CSS0034887 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 1.3e-45 189.1 258 42.2
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 3.8e-45 187.6 258 41.9
RcHm_v2.0_Chr4g0437181 Rosa chinensis HOM05D007623 ORTHO05D009641 3.8e-45 187.6 266 41.4
vmacro01293 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 2.1e-43 181.8 271 39.9
Hund25149 Selenicereus undatus HOM05D007623 ORTHO05D009641 2.7e-43 181.4 294 38.4
Actinidia31923 Actinidia chinensis HOM05D007623 ORTHO05D009641 8.0e-43 179.9 283 39.9
Nn1g03057 Nelumbo nucifera HOM05D007623 ORTHO05D009641 3.0e-42 177.9 282 36.9
Actinidia24041 Actinidia chinensis HOM05D007623 ORTHO05D009641 5.7e-41 173.7 273 39.6
Lsat_1_v5_gn_6_31920 Lactuca sativa HOM05D007623 ORTHO05D009641 9.7e-41 172.9 274 38.3
BcaB08g34697 Brassica carinata HOM05D007623 ORTHO05D009641 1.7e-40 172.2 98 89.8
Lj6A773T130 Lonicera japonica HOM05D007623 ORTHO05D009641 2.2e-40 171.8 273 37.4
Prupe.7G020300 Prunus persica HOM05D007623 ORTHO05D009641 2.2e-40 171.8 203 44.8
EL10Ac6g14659 Beta vulgaris HOM05D007623 ORTHO05D009641 2.8e-40 171.4 263 38.0
Aqoxy1G01216 Aquilegia oxysepala HOM05D007623 ORTHO05D009641 9.1e-39 166.4 272 34.9
Sopen00g002400 Solanum pennellii HOM05D007623 ORTHO05D009641 9.1e-39 166.4 210 39.0
CARHR013990 Cardamine hirsuta HOM05D007623 ORTHO05D009641 1.2e-38 166.0 94 84.0
HanXRQChr08g0215011 Helianthus annuus HOM05D007623 ORTHO05D009641 1.3e-37 162.5 284 35.9
AUR62007860 Chenopodium quinoa HOM05D007623 ORTHO05D009641 1.7e-37 162.2 227 38.3
PGSC0003DMG400019642 Solanum tuberosum HOM05D007623 ORTHO05D009641 2.9e-37 161.4 209 39.2
AUR62003048 Chenopodium quinoa HOM05D007623 ORTHO05D009641 5.5e-36 157.1 274 34.3
Rhsim12G0070700 Rhododendron simsii HOM05D007623 ORTHO05D009641 3.6e-35 154.5 261 37.5
DCAR_023738 Daucus carota HOM05D007623 ORTHO05D009641 1.0e-34 152.9 227 39.2
Migut.E00256 Erythranthe guttata HOM05D007623 ORTHO05D009641 2.6e-33 148.3 274 36.5
Sc11g0002680 Simmondsia chinensis HOM05D007623 ORTHO05D009641 9.8e-33 146.4 169 42.6
Oeu019601.2 Olea europaea HOM05D007623 ORTHO05D009641 2.2e-32 145.2 193 39.9
ECA233G1899 Erigeron canadensis HOM05D000630 ORTHO05D001413 3.7e-32 144.4 176 43.8
Ah.03g137460 Amaranthus hybridus HOM05D007623 ORTHO05D009641 1.4e-31 142.5 279 33.7
Cc11_g11460 Coffea canephora HOM05D007623 ORTHO05D009641 1.8e-31 142.1 222 36.9
BcaB06g28282 Brassica carinata HOM05D007623 ORTHO05D009641 2.4e-31 141.7 95 81.1
MD13G1055600 Malus domestica HOM05D007623 ORTHO05D009641 7.0e-31 140.2 118 58.5
SGA_v2.0_scaffold287G47196 Striga asiatica HOM05D007623 ORTHO05D009641 5.9e-30 137.1 191 38.2
Cpa.g.c32845 Carica papaya HOM05D007623 ORTHO05D009641 2.0e-25 122.1 153 45.8
Gohir.D02G132000 Gossypium hirsutum HOM05D007623 ORTHO05D009641 1.4e-23 115.9 108 55.6
ATR0048G027 Amborella trichopoda HOM05D007623 ORTHO05D009641 7.0e-23 113.6 152 37.5
Ciclev10031004m.g Citrus clementina HOM05D007623 ORTHO05D009641 8.6e-21 106.7 98 51.0
Lsat_1_v5_gn_3_22320 Lactuca sativa HOM05D007623 ORTHO05D009641 1.2e-19 102.8 193 39.4
Peaxi162Scf00188g01015 Petunia axillaris HOM05D007623 ORTHO05D009641 2.1e-19 102.1 97 48.5
HPP92_001379 Vanilla planifolia HOM05D007623 ORTHO05D009641 8.9e-18 96.7 166 33.7
TAR374G0443 Trochodendron aralioides HOM05D007623 ORTHO05D009641 7.5e-17 93.6 99 41.4
Zm00001eb045730 Zea mays HOM05D007623 ORTHO05D009641 9.8e-17 93.2 120 36.7
CAN.G680.12 Capsicum annuum HOM05D007623 ORTHO05D009641 8.3e-16 90.1 95 45.3
Nitab4.5_0000259g0170 Nicotiana tabacum HOM05D007623 ORTHO05D009641 8.3e-16 90.1 97 44.3
Nitab4.5_0011373g0020 Nicotiana tabacum HOM05D007623 ORTHO05D009641 5.4e-15 87.4 97 43.3
TAR374G1445 Trochodendron aralioides HOM05D007623 ORTHO05D009641 9.2e-15 86.7 137 36.5
SEGI_39043 Sequoiadendron giganteum HOM05D007623 ORTHO05D009641 1.2e-14 86.3 185 28.1
CSS0001323 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D009847 4.0e-10 71.2 206 26.2
Haze_20537 Corylus avellana HOM05D002890 ORTHO05D009847 1.7e-08 65.9 191 26.2
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 1.7e-08 65.9 197 24.9
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 3.7e-08 64.7 209 24.9
Lalb_Chr01g0001971 Lupinus albus HOM05D002890 ORTHO05D009847 3.7e-08 64.7 186 25.3
Ah.10g029280 Amaranthus hybridus HOM05D007623 ORTHO05D009641 1.1e-07 63.2 155 31.0
ClCG03G004730 Citrullus lanatus HOM05D002890 ORTHO05D009847 1.1e-07 63.2 197 23.9
arahy.Tifrunner.gnm1.ann1.GQ8ZCN Arachis hypogaea HOM05D002890 ORTHO05D009847 5.4e-07 60.8 197 23.9
Solyc05g010790.3 Solanum lycopersicum HOM05D007623 ORTHO05D009641 3.5e-06 58.2 75 37.3


User provided reference genes

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