Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p07670 Brassica napus HOM05D003347 ORTHO05D003821 5.1e-92 341.7 260 100.0
BraA06t23968Z Brassica rapa HOM05D003347 ORTHO05D003821 3.1e-73 279.3 234 96.2
BolC5t29665H Brassica oleracea HOM05D003347 ORTHO05D003821 7.9e-61 238.0 234 83.8
Thhalv10008376m.g Eutrema salsugineum HOM05D003347 ORTHO05D003821 7.4e-51 204.9 238 79.0
C05p09260 Brassica napus HOM05D003347 ORTHO05D003821 3.5e-48 196.1 195 86.2
AT1G10890 Arabidopsis thaliana HOM05D003347 ORTHO05D003821 2.8e-42 176.4 242 70.2
BcaC05g24971 Brassica carinata HOM05D003347 ORTHO05D003821 1.0e-39 167.9 172 86.0
Carub.0001s1045 Capsella rubella HOM05D003347 ORTHO05D003821 9.4e-38 161.4 239 68.2
Sp1g09610 Schrenkiella parvula HOM05D003347 ORTHO05D003821 4.8e-34 149.1 240 70.0
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 5.4e-25 119.0 245 54.3
AL1G21850 Arabidopsis lyrata HOM05D003347 ORTHO05D003821 1.6e-24 117.5 242 63.2
Aa31LG1G3970 Aethionema arabicum HOM05D003347 ORTHO05D003821 3.8e-23 112.8 134 71.6
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 5.0e-23 112.5 256 55.1
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 5.0e-23 112.5 243 58.4
THA.LOC104819278 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 6.6e-23 112.1 222 59.9
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 1.8e-20 104.0 253 54.9
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 6.8e-20 102.1 244 50.4
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 8.9e-20 101.7 210 52.9
Manes.07G015700 Manihot esculenta HOM05D003347 ORTHO05D003821 8.9e-20 101.7 260 54.6
BcaNung04761 Brassica carinata HOM05D003347 ORTHO05D003821 4.4e-19 99.4 91 76.9
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 5.8e-19 99.0 254 54.7
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.7e-18 97.4 243 53.9
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.7e-18 97.4 244 56.1
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 4.9e-18 95.9 214 59.3
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 6.4e-18 95.5 212 53.3
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 6.4e-18 95.5 262 48.1
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 8.3e-18 95.1 213 60.1
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 8.3e-18 95.1 219 60.7
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 8.3e-18 95.1 244 59.8
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 1.1e-17 94.7 212 59.0
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 1.4e-17 94.4 214 46.3
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 5.4e-17 92.4 244 53.3
arahy.Tifrunner.gnm1.ann1.CXB9HG Arachis hypogaea HOM05D003347 ORTHO05D003821 9.2e-17 91.7 242 59.1
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 9.2e-17 91.7 211 52.6
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 1.2e-16 91.3 237 58.6
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 1.6e-16 90.9 212 61.3
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 1.6e-16 90.9 224 56.2
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.0e-16 90.5 244 57.0
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.7e-16 90.1 213 48.4
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 1.0e-15 88.2 243 58.4
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 1.0e-15 88.2 177 58.2
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.3e-15 87.0 242 50.8
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 2.3e-15 87.0 214 57.5
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 3.0e-15 86.7 246 52.0
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 3.9e-15 86.3 201 57.7
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 5.0e-15 85.9 167 59.9
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 5.0e-15 85.9 220 48.6
Thecc.02G038200 Theobroma cacao HOM05D003347 ORTHO05D003821 8.6e-15 85.1 244 55.7
Lalb_Chr18g0060901 Lupinus albus HOM05D003347 ORTHO05D003821 1.1e-14 84.7 243 57.2
Gohir.A12G031700 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.5e-14 84.3 244 59.0
BcaNung04762 Brassica carinata HOM05D003347 ORTHO05D003821 1.9e-14 84.0 81 76.5
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 1.9e-14 84.0 212 53.3
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 5.6e-14 82.4 171 56.7
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 5.6e-14 82.4 171 56.7
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 2.1e-13 80.5 242 55.8
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 2.1e-13 80.5 240 52.5
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 2.8e-13 80.1 171 60.2
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 2.8e-13 80.1 201 58.7
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 4.7e-13 79.3 214 45.8
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 6.2e-13 79.0 210 49.5
DCAR_029250 Daucus carota HOM05D003347 ORTHO05D003821 8.0e-13 78.6 246 57.7
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 8.0e-13 78.6 117 45.3
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.1e-12 78.2 210 51.9
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 1.1e-12 78.2 196 45.9
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 2.3e-12 77.0 250 48.8
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.3e-12 77.0 186 37.6
EL10Ac6g14071 Beta vulgaris HOM05D003347 ORTHO05D003821 3.1e-12 76.6 238 53.4
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 3.1e-12 76.6 168 57.7
FAN16G0856 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.2e-11 74.7 216 52.3
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 5.8e-11 72.4 176 58.0
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 9.8e-11 71.6 165 46.1
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 1.7e-10 70.9 244 53.3
Prupe.1G568600 Prunus persica HOM05D003347 ORTHO05D003821 2.9e-10 70.1 215 55.3
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 3.7e-10 69.7 150 48.0
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 3.7e-10 69.7 244 52.5
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 3.7e-10 69.7 257 52.9
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 3.7e-10 69.7 170 60.0
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 3.7e-10 69.7 243 52.7
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 6.4e-10 68.9 208 50.5
RcHm_v2.0_Chr5g0049401 Rosa chinensis HOM05D003347 ORTHO05D003821 6.4e-10 68.9 215 54.9
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 8.3e-10 68.6 213 56.8
CARHR011110 Cardamine hirsuta HOM05D003347 ORTHO05D003821 1.1e-09 68.2 70 68.6
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 1.1e-09 68.2 168 63.1
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 1.4e-09 67.8 243 48.1
CiPaw.06G147300 Carya illinoinensis HOM05D003347 ORTHO05D003821 2.4e-09 67.0 242 52.1
Cpa.g.sc113.60 Carica papaya HOM05D003347 ORTHO05D003821 5.4e-09 65.9 247 51.0
ClCG09G014210 Citrullus lanatus HOM05D003347 ORTHO05D003821 7.0e-09 65.5 167 56.3
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 7.0e-09 65.5 243 47.3
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 7.0e-09 65.5 215 52.1
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 1.6e-08 64.3 260 52.7
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 2.1e-08 63.9 219 46.6
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 2.1e-08 63.9 136 41.2
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 2.1e-08 63.9 247 40.1
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 2.1e-08 63.9 272 37.9
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 2.7e-08 63.5 220 52.3
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.7e-08 63.5 200 48.5
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 2.7e-08 63.5 163 44.2
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 2.7e-08 63.5 168 61.9
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 3.5e-08 63.2 200 35.0
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 3.5e-08 63.2 200 49.5
Nitab4.5_0000816g0010 Nicotiana tabacum HOM05D003347 ORTHO05D003821 4.6e-08 62.8 164 52.4
Duzib248G0125 Durio zibethinus HOM05D003347 ORTHO05D003821 6.0e-08 62.4 133 59.4
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 6.0e-08 62.4 175 52.6
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 7.8e-08 62.0 219 43.4
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.0e-07 61.6 168 42.9
Nitab4.5_0003344g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.0e-07 61.6 142 57.7
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 2.3e-07 60.5 69 52.2
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 2.3e-07 60.5 95 41.1
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 2.3e-07 60.5 74 50.0
FAN21G3803 Fragaria x ananassa HOM05D003347 ORTHO05D003821 3.0e-07 60.1 216 53.2
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 3.9e-07 59.7 74 50.0
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 3.9e-07 59.7 201 38.8
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 6.6e-07 58.9 170 48.8
CAN.G1577.23 Capsicum annuum HOM05D003347 ORTHO05D003821 8.6e-07 58.5 269 40.9
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 1.1e-06 58.2 211 53.6
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.1e-06 58.2 201 48.8
Gohir.D09G005500 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.5e-06 57.8 200 48.5
Solyc01g104160.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 1.5e-06 57.8 141 59.6
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 1.9e-06 57.4 113 54.0
SMO163G0068 Selaginella moellendorffii HOM05D003347 ORTHO05D003821 2.5e-06 57.0 181 40.3
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 3.3e-06 56.6 117 48.7
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 7.3e-06 55.5 172 46.5
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 9.5e-06 55.1 123 47.2
FvH4_3g26951 Fragaria vesca HOM05D003347 ORTHO05D003821 9.5e-06 55.1 213 52.6
FAN11G2552 Fragaria x ananassa HOM05D003347 ORTHO05D003821 9.5e-06 55.1 213 52.6


User provided reference genes

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