Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p07570 Brassica napus HOM05D009121 ORTHO05D001888 1.3e-85 319.7 169 100.0
BraA06t23959Z Brassica rapa HOM05D009121 ORTHO05D001888 1.3e-85 319.7 169 100.0
BolC5t29657H Brassica oleracea HOM05D009121 ORTHO05D001888 1.1e-84 316.6 169 98.8
C05p09130 Brassica napus HOM05D009121 ORTHO05D001888 2.5e-84 315.5 169 98.2
BcaC05g24955 Brassica carinata HOM05D009121 ORTHO05D001888 1.8e-77 292.7 169 91.1
C08p48520 Brassica napus HOM05D009121 ORTHO05D001888 5.5e-71 271.2 169 82.8
BolC8t52391H Brassica oleracea HOM05D009121 ORTHO05D001888 2.1e-70 269.2 169 82.2
A09p64670 Brassica napus HOM05D009121 ORTHO05D001888 4.7e-70 268.1 169 81.7
BcaB08g37374 Brassica carinata HOM05D009121 ORTHO05D001888 1.8e-69 266.2 169 81.1
Sp1g09470 Schrenkiella parvula HOM05D009121 ORTHO05D001888 2.3e-69 265.8 169 81.1
BraA09t41825Z Brassica rapa HOM05D009121 ORTHO05D001888 3.9e-69 265.0 169 81.1
AL1G21700 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 3.1e-66 255.4 169 78.7
Thhalv10008932m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 7.0e-66 254.2 169 77.5
AT1G10770 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 1.0e-64 250.4 169 76.9
Carub.0001s1032 Capsella rubella HOM05D009121 ORTHO05D001888 1.0e-64 250.4 167 78.4
BcaC07g38628 Brassica carinata HOM05D009121 ORTHO05D001888 8.5e-64 247.3 167 76.6
CARHR010990 Cardamine hirsuta HOM05D009121 ORTHO05D001888 6.1e-62 241.1 169 74.6
BcaC07g38589 Brassica carinata HOM05D009121 ORTHO05D001888 7.2e-55 217.6 167 69.5
THA.LOC104819351 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 3.7e-51 205.3 171 64.9
Aa31LG2G9780 Aethionema arabicum HOM05D009121 ORTHO05D001888 1.8e-50 203.0 169 63.3
THA.LOC104809586 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 7.0e-50 201.1 168 62.5
AL2G15820 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 4.2e-47 191.8 169 61.5
Carub.0002s0459 Capsella rubella HOM05D009121 ORTHO05D001888 5.5e-47 191.4 151 67.5
AT1G60760 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 3.6e-46 188.7 169 61.5
Sp2g04000 Schrenkiella parvula HOM05D009121 ORTHO05D001888 1.1e-42 177.2 168 57.1
CARHR051730 Cardamine hirsuta HOM05D009121 ORTHO05D001888 1.0e-40 170.6 169 57.4
Aa31LG1G4060 Aethionema arabicum HOM05D009121 ORTHO05D001888 1.7e-40 169.9 143 59.4
Thhalv10024081m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 5.0e-40 168.3 167 57.5
BcaNung05350 Brassica carinata HOM05D009121 ORTHO05D001888 1.5e-36 156.8 168 52.4
A09p17300 Brassica napus HOM05D009121 ORTHO05D001888 1.7e-35 153.3 168 51.2
BraA09t37359Z Brassica rapa HOM05D009121 ORTHO05D001888 1.7e-35 153.3 168 51.2
C09p21480 Brassica napus HOM05D009121 ORTHO05D001888 2.8e-35 152.5 148 54.7
BolC9t55053H Brassica oleracea HOM05D009121 ORTHO05D001888 2.8e-35 152.5 148 54.7
BolC8t49030H Brassica oleracea HOM05D009121 ORTHO05D001888 1.5e-31 140.2 95 74.7
C08p13970 Brassica napus HOM05D009121 ORTHO05D001888 3.6e-22 109.0 71 78.9
Ciclev10032926m.g Citrus clementina HOM05D008070 ORTHO05D001888 4.7e-14 82.0 165 29.7
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 1.8e-13 80.1 132 32.6
TAR629G1731 Trochodendron aralioides HOM05D008070 ORTHO05D001888 3.1e-13 79.3 172 31.4
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 7.5e-12 74.7 147 29.9
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 1.3e-11 73.9 151 32.5
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 3.7e-11 72.4 133 33.1
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 3.7e-11 72.4 155 33.5
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 4.9e-11 72.0 151 31.1
Thhalv10022426m.g Eutrema salsugineum HOM05D005742 ORTHO05D001888 4.9e-11 72.0 147 28.6
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 6.4e-11 71.6 143 28.0
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 8.3e-11 71.2 158 32.3
AL1G37150 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 1.4e-10 70.5 152 28.3
BcaB07g32331 Brassica carinata HOM05D008070 ORTHO05D001888 1.4e-10 70.5 150 32.0
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 1.4e-10 70.5 133 30.1
Manes.12G025200 Manihot esculenta HOM05D008070 ORTHO05D001888 1.9e-10 70.1 161 31.1
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 1.9e-10 70.1 149 31.5
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 2.4e-10 69.7 133 30.1
AT1G23350 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 2.4e-10 69.7 149 29.5
BcaC05g26248 Brassica carinata HOM05D008070 ORTHO05D001888 2.4e-10 69.7 150 32.0
C05p22620 Brassica napus HOM05D008070 ORTHO05D001888 2.4e-10 69.7 150 32.0
BolC5t30961H Brassica oleracea HOM05D008070 ORTHO05D001888 2.4e-10 69.7 150 32.0
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 3.2e-10 69.3 152 30.9
BcaB03g14151 Brassica carinata HOM05D008070 ORTHO05D001888 4.1e-10 68.9 159 30.2
QL03p058730 Quercus lobata HOM05D008070 ORTHO05D001888 4.1e-10 68.9 148 29.7
AT3G36659 Arabidopsis thaliana HOM05D005742 ORTHO05D001888 5.4e-10 68.6 133 29.3
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 1.2e-09 67.4 146 28.1
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 1.2e-09 67.4 146 28.1
CARHR023800 Cardamine hirsuta HOM05D008070 ORTHO05D001888 2.1e-09 66.6 146 30.1
BcaC06g35034 Brassica carinata HOM05D008070 ORTHO05D001888 2.7e-09 66.2 151 30.5
Carub.0003s0617 Capsella rubella HOM05D005742 ORTHO05D001888 2.7e-09 66.2 134 29.1
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 3.5e-09 65.9 146 27.4
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 3.5e-09 65.9 146 27.4
TAR622G1131 Trochodendron aralioides HOM05D008070 ORTHO05D001888 3.5e-09 65.9 147 29.3
Atru.chr11.2085 Acer truncatum HOM05D008070 ORTHO05D001888 4.6e-09 65.5 162 27.8
Atru.chr11.2086 Acer truncatum HOM05D008070 ORTHO05D001888 4.6e-09 65.5 162 27.8
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 4.6e-09 65.5 134 25.4
BcaC05g30549 Brassica carinata HOM05D005742 ORTHO05D001888 4.6e-09 65.5 136 28.7
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 4.6e-09 65.5 131 28.2
BolC7t42570H Brassica oleracea HOM05D008070 ORTHO05D001888 6.0e-09 65.1 151 29.8
CiPaw.06G069400 Carya illinoinensis HOM05D008070 ORTHO05D001888 6.0e-09 65.1 162 32.1
QL04p082607 Quercus lobata HOM05D010056 ORTHO05D001888 1.0e-08 64.3 149 29.5
BraA07t29145Z Brassica rapa HOM05D008070 ORTHO05D001888 1.3e-08 63.9 131 30.5
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 1.3e-08 63.9 152 25.7
TAR362G0759 Trochodendron aralioides HOM05D005742 ORTHO05D001888 1.3e-08 63.9 161 31.1
THA.LOC104822979 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 1.7e-08 63.5 155 30.3
BcaB03g11935 Brassica carinata HOM05D008070 ORTHO05D001888 2.3e-08 63.2 160 30.6
Sp1g20800 Schrenkiella parvula HOM05D008070 ORTHO05D001888 3.0e-08 62.8 157 27.4
Thhalv10008931m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 5.1e-08 62.0 152 28.9
TAR633G1530 Trochodendron aralioides HOM05D005742 ORTHO05D001888 1.1e-07 60.8 144 31.9
CsaV3_5G031330 Cucumis sativus L. HOM05D008070 ORTHO05D001888 1.5e-07 60.5 152 26.3
Hma1.2p1_0013F.1_g008650 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 1.9e-07 60.1 153 28.8
Nn3g21713 Nelumbo nucifera HOM05D005742 ORTHO05D001888 1.9e-07 60.1 145 26.9
Duzib052G0264 Durio zibethinus HOM05D005742 ORTHO05D001888 2.5e-07 59.7 151 28.5
Aa31LG7G7380 Aethionema arabicum HOM05D008070 ORTHO05D001888 3.3e-07 59.3 154 29.9
A08p28210 Brassica napus HOM05D008070 ORTHO05D001888 4.3e-07 58.9 132 31.8
BraA08t34752Z Brassica rapa HOM05D008070 ORTHO05D001888 4.3e-07 58.9 132 31.8
BcaC07g39196 Brassica carinata HOM05D008070 ORTHO05D001888 5.6e-07 58.5 155 29.7
BolC8t49825H Brassica oleracea HOM05D008070 ORTHO05D001888 5.6e-07 58.5 155 29.7
BraA09t39622Z Brassica rapa HOM05D008070 ORTHO05D001888 7.3e-07 58.2 113 32.7
Haze_01291 Corylus avellana HOM05D005742 ORTHO05D001888 7.3e-07 58.2 138 29.0
Sed0009222 Sechium edule HOM05D005742 ORTHO05D001888 7.3e-07 58.2 153 28.1
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 1.2e-06 57.4 113 32.7
C08p21860 Brassica napus HOM05D008070 ORTHO05D001888 1.2e-06 57.4 155 29.7
Cfa015324 Carpinus fangiana HOM05D005742 ORTHO05D001888 1.6e-06 57.0 139 28.8
Oeu032017.1 Olea europaea HOM05D005742 ORTHO05D001888 1.6e-06 57.0 146 25.3
Duzib151G0239 Durio zibethinus HOM05D005742 ORTHO05D001888 2.1e-06 56.6 153 26.1
Prupe.1G249100 Prunus persica HOM05D008070 ORTHO05D001888 2.1e-06 56.6 147 25.9
THA.LOC104818886 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 2.1e-06 56.6 134 29.1
Cpa.g.sc9.68 Carica papaya HOM05D005742 ORTHO05D001888 3.6e-06 55.8 145 29.0
Ciclev10007183m.g Citrus clementina HOM05D005742 ORTHO05D001888 3.6e-06 55.8 144 30.6
Nn4g25584 Nelumbo nucifera HOM05D005742 ORTHO05D001888 3.6e-06 55.8 146 30.1
Rhsim04G0235100 Rhododendron simsii HOM05D005742 ORTHO05D001888 4.7e-06 55.5 141 27.0
Atru.chr4.3013 Acer truncatum HOM05D005742 ORTHO05D001888 6.2e-06 55.1 121 28.1
DCAR_027000 Daucus carota HOM05D005742 ORTHO05D001888 6.2e-06 55.1 140 27.9
Gohir.D02G058775 Gossypium hirsutum HOM05D005742 ORTHO05D001888 6.2e-06 55.1 149 28.2


User provided reference genes

Program Settings